GWAS1125969_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1125969_H (body mass index QTL GWAS1125969 (human)) Homo sapiens

Symbol: GWAS1125969_H
Name: body mass index QTL GWAS1125969 (human)
RGD ID: 597029895
Trait: body mass index
Measurement Type: body mass index (BMI)   (CMO:0000105)    
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3869,509,797 - 9,509,798RGD_MAPPER_PIPELINEGRCh38
GRCh3769,510,030 - 9,510,031RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1125969_HHumanbody mass index (BMI)  IAGPrs9463175405850206 GWAS_CATALOGPMID:30595370

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1125969_HHumanbody mass index  IAGPrs9463175405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records



Peak: (rs9463175)
Human AssemblyChrPosition (strand)Source
GRCh3869,509,797 - 9,509,798RGD_MAPPER_PIPELINE


1 to 10 of 18 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
597181180GWAS1277254_Hbody mass index QTL GWAS1277254 (human)5e-11body mass indexbody mass index (BMI) (CMO:0000105)695097979509798Human
597326111GWAS1422185_Hbody mass index QTL GWAS1422185 (human)3e-09esophageal adenocarcinoma, Barrett's esophagusbody mass index (BMI) (CMO:0000105)695097979509798Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
597170964GWAS1267038_Hbody mass index QTL GWAS1267038 (human)1e-09body mass indexbody mass index (BMI) (CMO:0000105)695097979509798Human
597178856GWAS1274930_Hbody mass index QTL GWAS1274930 (human)8e-10body mass indexbody mass index (BMI) (CMO:0000105)695097979509798Human

1 to 10 of 18 rows


1 to 9 of 9 rows
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1125969_H GCST007039 Body mass index approximately 458,000 European ancestry individuals ? NR 2E-8 7.699 rs9463175 N/A body mass index (EFO:0004340)
 PMID:30595370
GWAS1267038_H GCST90018947 Body mass index 359,983 European ancestry individuals, 163,835 East Asian ancestry individuals T NR 1E-9 9 rs9463175 0.013 body mass index (EFO:0004340)
 PMID:34594039
GWAS1274930_H GCST90255621 Body mass index 1,122,049 European ancestry individuals C NR 8E-10 9.097 rs9463175 0.0096 body mass index (EFO:0004340)
 PMID:36581621
GWAS1277254_H GCST90179150 Body mass index (MTAG) 694,649 European ancestry individuals T NR 5E-11 10.302 rs9463175 0.01128 body mass index (EFO:0004340)
 PMID:36376304
None Available GCST90446645 Body mass index 650,000 European ancestry individuals C 0.6834 2E-8 7.699 rs9463175 0.0104 body mass index (EFO:0004340)
 PMID:39375568
GWAS1422185_H GCST90301649 Childhood body mass index 441,761 European ancestry individuals C NR 3E-9 8.523 rs9463175 0.0132516 body mass index (EFO:0004340)
 PMID:37280435
GWAS1442197_H GCST90301650 Body mass index 441,761 European ancestry individuals C NR 3E-8 7.523 rs9463175 0.011014 body mass index (EFO:0004340)
 PMID:37280435
GWAS1559989_H GCST90258657 Barrett's esophagus 11,208 European ancestry cases, 32,476 European ancestry controls T 0.35 2E-7 6.699 rs9463175 0.09 Barrett's esophagus (EFO:0000280)
 PMID:35882562
None Available GCST90258656 Barrett's esophagus or Esophageal adenocarcinoma 16,790 European ancestry cases, 32,476 European ancestry controls T 0.356 3E-9 8.523 rs9463175 0.093 esophageal adenocarcinoma (EFO:0000478)
Barrett's esophagus (EFO:0000280)
 PMID:35882562
1 to 9 of 9 rows
Database
Acc Id
Source(s)
GWAS Catalog GCST007039 GWAS Catalog
  GCST90446645 GWAS Catalog

Note Type Note Reference