GWAS1125477_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1125477_H (self reported educational attainment QTL GWAS1125477 (human)) Homo sapiens

Symbol: GWAS1125477_H
Name: self reported educational attainment QTL GWAS1125477 (human)
RGD ID: 597029403
Trait: self reported educational attainment
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381547,461,830 - 47,461,831RGD_MAPPER_PIPELINEGRCh38
GRCh371547,754,027 - 47,754,028RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1125477_HHumanself reported educational attainment  IAGPrs281323405850206 GWAS_CATALOGPMID:30595370

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1605040SEMA6Dsemaphorin 6D154718408947774228Human


Peak: (rs281323)
Human AssemblyChrPosition (strand)Source
GRCh381547,461,830 - 47,461,831RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1643523BW284_HBody Weight QTL 284 (human)1.950.0013Body weight152179288947792889Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
597029403GWAS1125477_Hself reported educational attainment QTL GWAS1125477 (human)1e-08self reported educational attainment154746183047461831Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1125477_H GCST007037 Educational attainment (years of education) approximately 455,000 European ancestry individuals ? NR 1E-8 8 rs281323 N/A self reported educational attainment (EFO:0004784)
 PMID:30595370
GWAS1702147_H GCST007582 Attention deficit hyperactivity disorder or putamen volume (pleiotropy) 19,099 European ancestry ADHD cases, 1,084 ADHD cases, 34,194 European ancestry controls, 997 controls, 11,646 European ancestry individuals A NR 4E-9 8.398 rs281323 5.9 attention deficit hyperactivity disorder (EFO:0003888)
putamen volume (OBA:2050016)
 PMID:30818988
Database
Acc Id
Source(s)
GWAS Catalog GCST007037 GWAS Catalog

Note Type Note Reference