GWAS1115127_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1115127_H (BMI-adjusted waist-hip ratio QTL GWAS1115127 (human)) Homo sapiens

Symbol: GWAS1115127_H
Name: BMI-adjusted waist-hip ratio QTL GWAS1115127 (human)
RGD ID: 597019053
Trait: body size trait   (VT:0100005)    
LOD Score: Not Available
P Value: 5.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382046,909,795 - 46,909,796RGD_MAPPER_PIPELINEGRCh38
GRCh372045,538,434 - 45,538,435RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Vertebrate Trait
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1115127_HHumanbody size trait  IAGPrs6018158405850206 GWAS_CATALOGPMID:26426971

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS1115127_HHumanBMI-adjusted waist-hip ratio  IAGPrs6018158405850206 GWAS_CATALOGPMID:26426971

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1350703EYA2EYA transcriptional coactivator and phosphatase 2204689484347188844Human


Peak: (rs6018158)
Human AssemblyChrPosition (strand)Source
GRCh382046,909,795 - 46,909,796RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300007BP29_HBlood pressure QTL 29 (human)Blood pressurehypertension susceptibility203653600562536005Human
597019360GWAS1115434_HBMI-adjusted waist-hip ratio QTL GWAS1115434 (human)4e-10body size trait (VT:0100005)204690979546909796Human
597019053GWAS1115127_HBMI-adjusted waist-hip ratio QTL GWAS1115127 (human)0.000005body size trait (VT:0100005)204690979546909796Human
597019071GWAS1115145_HBMI-adjusted waist-hip ratio QTL GWAS1115145 (human)0.000003body size trait (VT:0100005)204690979546909796Human
597019610GWAS1115684_HBMI-adjusted waist-hip ratio, sex interaction measurement, age at assessment QTL GWAS1115684 (human)1e-09body size trait (VT:0100005)204690979546909796Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1115127_H GCST005957 Waist-to-hip ratio adjusted for BMI (age <50) up to 43,776 European ancestry men, up to 50,526 European ancestry women T 0.41 0.000005 5.302 rs6018158 0.037 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:26426971
GWAS1115145_H GCST005958 Waist-to-hip ratio adjusted for BMI (age >50) up to 69,944 European ancestry men, up to 88,129 European ancestry women T 0.407016072591424 0.000003 5.523 rs6018158 0.0303 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:26426971
GWAS1115434_H GCST005956 Waist-to-hip ratio adjusted for BMI up to 113,720 European ancestry men, up to 138,655 European ancestry women T 0.407 4E-10 9.398 rs6018158 0.0303 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:26426971
GWAS1115684_H GCST005962 Waist-to-hip ratio adjusted for BMI x sex x age interaction (4df test) up to 43,776 European ancestry men aged <50, up to 50,526 European ancestry women aged <50, up to 69,944 European ancestry men aged >50, up to 88,129 European ancestry women aged >50 T 0.407 1E-9 9 rs6018158 N/A BMI-adjusted waist-hip ratio (EFO:0007788)
sex interaction measurement (EFO:0008343)
age at assessment (EFO:0008007)
 PMID:26426971
Database
Acc Id
Source(s)
GWAS Catalog GCST005957 GWAS Catalog

Note Type Note Reference