GWAS1109431_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1109431_H (memory performance, sex interaction measurement QTL GWAS1109431 (human)) Homo sapiens

Symbol: GWAS1109431_H
Name: memory performance, sex interaction measurement QTL GWAS1109431 (human)
RGD ID: 596989912
Trait: memory performance, sex interaction measurement
LOD Score: Not Available
P Value: 8.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38612,856,255 - 12,856,256RGD_MAPPER_PIPELINEGRCh38
GRCh37612,856,487 - 12,856,488RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1353173PHACTR1phosphatase and actin regulator 161271676713287837Human


Peak: (rs71552720)
Human AssemblyChrPosition (strand)Source
GRCh38612,856,255 - 12,856,256RGD_MAPPER_PIPELINE


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
596989912GWAS1109431_Hmemory performance, sex interaction measurement QTL GWAS1109431 (human)0.000008memory performance, sex interaction measurement61285625512856256Human
597130586GWAS1226660_Hmemory performance, sex interaction measurement QTL GWAS1226660 (human)0.000008memory performance, sex interaction measurement61285625512856256Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human

1 to 10 of 13 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1226660_H GCST90448442 Baseline memory x sex interaction 24,216 European ancestry individuals ? NR 0.000008 5.097 rs71552720 0.113088 memory performance (EFO:0004874)
sex interaction measurement (EFO:0008343)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448442 GWAS Catalog

Note Type Note Reference