GWAS1105855_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1105855_H (memory performance QTL GWAS1105855 (human)) Homo sapiens

Symbol: GWAS1105855_H
Name: memory performance QTL GWAS1105855 (human)
RGD ID: 596986336
Trait: memory performance
LOD Score: Not Available
P Value: 2.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38115,949,011 - 15,949,012RGD_MAPPER_PIPELINEGRCh38
GRCh37116,275,506 - 16,275,507RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1347626ZBTB17zinc finger and BTB domain containing 1711594186915976101Human


Peak: (rs848218)
Human AssemblyChrPosition (strand)Source
GRCh38115,949,011 - 15,949,012RGD_MAPPER_PIPELINE


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597130199GWAS1226273_Hmemory performance QTL GWAS1226273 (human)7e-08memory performance11594901115949012Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
596986336GWAS1105855_Hmemory performance QTL GWAS1105855 (human)0.0000002memory performance11594901115949012Human
597131935GWAS1228009_Hmemory performance QTL GWAS1228009 (human)0.0000002memory performance11594901115949012Human
596983996GWAS1103515_Hmemory performance QTL GWAS1103515 (human)7e-08memory performance11594901115949012Human
597133358GWAS1229432_Hmemory performance QTL GWAS1229432 (human)0.00001memory performance11594901115949012Human
596981423GWAS1100942_Hmemory performance QTL GWAS1100942 (human)0.00001memory performance11594901115949012Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human

1 to 10 of 11 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1226273_H GCST90448447 Memory decline in normal cognition 4,950 European ancestry males, 391 African ancestry males ? NR 7E-8 7.155 rs848218 0.006916 memory performance (EFO:0004874)
 PMID:37984853
GWAS1228009_H GCST90448453 Memory decline in normal cognition 4,950 European ancestry males ? NR 2E-7 6.699 rs848218 0.006924 memory performance (EFO:0004874)
 PMID:37984853
GWAS1229432_H GCST90448451 Memory decline 11,062 European ancestry males ? NR 0.00001 5 rs848218 0.005863 memory performance (EFO:0004874)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448453 GWAS Catalog

Note Type Note Reference