GWAS1102397_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1102397_H (memory performance QTL GWAS1102397 (human)) Homo sapiens

Symbol: GWAS1102397_H
Name: memory performance QTL GWAS1102397 (human)
RGD ID: 596982878
Trait: memory performance
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38611,732,434 - 11,732,435RGD_MAPPER_PIPELINEGRCh38
GRCh37611,732,667 - 11,732,668RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1313849ADTRPandrogen dependent TFPI regulating protein61171352311778803Human


Peak: (rs9296142)
Human AssemblyChrPosition (strand)Source
GRCh38611,732,434 - 11,732,435RGD_MAPPER_PIPELINE


1 to 10 of 15 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
597135251GWAS1231325_Hmemory performance QTL GWAS1231325 (human)0.0000008memory performance61173243411732435Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
596982878GWAS1102397_Hmemory performance QTL GWAS1102397 (human)0.000004memory performance61173243411732435Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
596984070GWAS1103589_Hmemory performance QTL GWAS1103589 (human)0.0000008memory performance61173243411732435Human

1 to 10 of 15 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1231325_H GCST90448460 Memory decline 13,154 European ancestry females ? NR 8E-7 6.097 rs9296142 0.009896 memory performance (EFO:0004874)
 PMID:37984853
GWAS1298521_H GCST90448462 Memory decline in normal cognition 7,839 European ancestry females ? NR 0.000004 5.398 rs9296142 0.008771 memory performance (EFO:0004874)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448462 GWAS Catalog

Note Type Note Reference