GWAS1100267_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1100267_H (memory performance QTL GWAS1100267 (human)) Homo sapiens

Symbol: GWAS1100267_H
Name: memory performance QTL GWAS1100267 (human)
RGD ID: 596980748
Trait: memory performance
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3812,343,517 - 2,343,518RGD_MAPPER_PIPELINEGRCh38
GRCh3712,274,956 - 2,274,957RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602465MORN1MORN repeat containing 1123212532391554Human


Peak: (rs4648828)
Human AssemblyChrPosition (strand)Source
GRCh3812,343,517 - 2,343,518RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597193080GWAS1289154_Hmemory performance QTL GWAS1289154 (human)0.000002memory performance123435172343518Human
596980748GWAS1100267_Hmemory performance QTL GWAS1100267 (human)0.000002memory performance123435172343518Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1289154_H GCST90448433 Baseline memory 13,154 European ancestry females ? NR 0.000002 5.699 rs4648828 0.042765 memory performance (EFO:0004874)
 PMID:37984853
Database
Acc Id
Source(s)
GWAS Catalog GCST90448433 GWAS Catalog

Note Type Note Reference