GWAS1096749_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1096749_H (glomerular filtration rate QTL GWAS1096749 (human)) Homo sapiens

Symbol: GWAS1096749_H
Name: glomerular filtration rate QTL GWAS1096749 (human)
RGD ID: 596977230
Trait: glomerular filtration rate
LOD Score: Not Available
P Value: 3.0E-13
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381553,680,287 - 53,680,288RGD_MAPPER_PIPELINEGRCh38
GRCh371553,972,484 - 53,972,485RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602418WDR72WD repeat domain 72155351374153762878Human


Peak: (rs572528)
Human AssemblyChrPosition (strand)Source
GRCh381553,680,287 - 53,680,288RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
596977230GWAS1096749_Hglomerular filtration rate QTL GWAS1096749 (human)3e-13glomerular filtration rate155368028753680288Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1750919_H GCST90446493 Estimated glomerular filtration rate 58,406 Korean ancestry individuals A NR 3E-13 12.523 rs572528 0.5018 glomerular filtration rate (OBA:0003747)
 PMID:37919891
Database
Acc Id
Source(s)
GWAS Catalog GCST90446493 GWAS Catalog

Note Type Note Reference