GWAS1095798_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1095798_H (glomerular filtration rate QTL GWAS1095798 (human)) Homo sapiens

Symbol: GWAS1095798_H
Name: glomerular filtration rate QTL GWAS1095798 (human)
RGD ID: 596976279
Trait: glomerular filtration rate
LOD Score: Not Available
P Value: 1.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381553,697,549 - 53,697,550RGD_MAPPER_PIPELINEGRCh38
GRCh371553,989,746 - 53,989,747RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1602418WDR72WD repeat domain 72155351374153762878Human


Peak: (rs7174645)
Human AssemblyChrPosition (strand)Source
GRCh381553,697,549 - 53,697,550RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596976279GWAS1095798_Hglomerular filtration rate QTL GWAS1095798 (human)1e-11glomerular filtration rate155369754953697550Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
596978547GWAS1098066_Hblood urea nitrogen measurement QTL GWAS1098066 (human)0.000007blood urea nitrogen measurement155369754953697550Human
597283621GWAS1379695_Hblood urea nitrogen measurement QTL GWAS1379695 (human)0.000007blood urea nitrogen measurementblood urea nitrogen level (CMO:0000049)155369754953697550Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1751336_H GCST90446493 Estimated glomerular filtration rate 58,406 Korean ancestry individuals T NR 1E-11 11 rs7174645 0.4658 glomerular filtration rate (OBA:0003747)
 PMID:37919891
GWAS1379695_H GCST90446494 Blood urea nitrogen levels 58,406 Korean ancestry individuals T NR 0.000007 5.155 rs7174645 0.0069 blood urea nitrogen measurement (EFO:0004741)
 PMID:37919891
Database
Acc Id
Source(s)
GWAS Catalog GCST90446493 GWAS Catalog

Note Type Note Reference