GWAS1095193_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1095193_H (Behcet's syndrome QTL GWAS1095193 (human)) Homo sapiens

Symbol: GWAS1095193_H
Name: Behcet's syndrome QTL GWAS1095193 (human)
RGD ID: 596975674
Trait: Behcet's syndrome
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3815,977,548 - 5,977,549RGD_MAPPER_PIPELINEGRCh38
GRCh3716,037,608 - 6,037,609RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1351118NPHP4nephrocystin 4158628115992425Human


Peak: (rs74566205)
Human AssemblyChrPosition (strand)Source
GRCh3815,977,548 - 5,977,549RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
597281721GWAS1377795_HBehcet's syndrome QTL GWAS1377795 (human)1e-08Behcet's syndrome159775485977549Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
596975674GWAS1095193_HBehcet's syndrome QTL GWAS1095193 (human)1e-08Behcet's syndrome159775485977549Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1377795_H GCST90448092 Behcet's disease 1,689 Korean ancestry cases, 2,327 Korean ancestry controls ? NR 1E-8 8 rs74566205 N/A Behcet's syndrome (EFO:0003780)
 PMID:37977914
Database
Acc Id
Source(s)
GWAS Catalog GCST90448092 GWAS Catalog

Note Type Note Reference