GWAS1089981_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1089981_H (tyrosine measurement QTL GWAS1089981 (human)) Homo sapiens

Symbol: GWAS1089981_H
Name: tyrosine measurement QTL GWAS1089981 (human)
RGD ID: 596970462
Trait: tyrosine measurement
LOD Score: Not Available
P Value: 2.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381560,603,437 - 60,603,438RGD_MAPPER_PIPELINEGRCh38
GRCh371560,895,636 - 60,895,637RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
9681205RORA-AS1RORA antisense RNA 1156047917860630639Human
1318175RORARAR related orphan receptor A156048828461229302Human


Peak: (rs2113943)
Human AssemblyChrPosition (strand)Source
GRCh381560,603,437 - 60,603,438RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597404810GWAS1500884_Htyrosine measurement QTL GWAS1500884 (human)2e-09tyrosine measurement156060343760603438Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
407035732GWAS684708_Htyrosine measurement QTL GWAS684708 (human)2e-09tyrosine measurement156060343760603438Human
596970462GWAS1089981_Htyrosine measurement QTL GWAS1089981 (human)2e-09tyrosine measurement156060343760603438Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1500884_H GCST90302120 Tyrosine levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.5866 2E-9 8.699 rs2113943 0.0244 tyrosine measurement (EFO:0005058)
 PMID:38448586
Database
Acc Id
Source(s)
GWAS Catalog GCST90302120 GWAS Catalog

Note Type Note Reference