GWAS1085739_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1085739_H (body mass index QTL GWAS1085739 (human)) Homo sapiens

Symbol: GWAS1085739_H
Name: body mass index QTL GWAS1085739 (human)
RGD ID: 596966220
Trait: body mass index
LOD Score: Not Available
P Value: 2.0E-17
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381113,280,328 - 13,280,329RGD_MAPPER_PIPELINEGRCh38
GRCh371113,301,875 - 13,301,876RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
732520BMAL1basic helix-loop-helix ARNT like 1111327665213387266Human


Peak: (rs72867447)
Human AssemblyChrPosition (strand)Source
GRCh381113,280,328 - 13,280,329RGD_MAPPER_PIPELINE


1 to 10 of 11 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1576345LVC1_HLeft ventricular contractility QTL 1 (human)3.93Left ventricular contractility11797076733970767Human
597243640GWAS1339714_Htriglyceride measurement QTL GWAS1339714 (human)8e-08triglyceride measurementblood triglyceride level (CMO:0000118)111328032813280329Human
597316971GWAS1413045_Hbody mass index QTL GWAS1413045 (human)2e-17body mass indexbody mass index (BMI) (CMO:0000105)111328032813280329Human
597240075GWAS1336149_Haspartate aminotransferase measurement, serum alanine aminotransferase measurement, low density lipoprotein triglyceride measurement, body fat percentage, high density lipoprotein cholesterol measurement, sex hormone-binding globulin measurement QTL GWAS1336149 (human)1e-12body fat mass (VT:0010482)blood high density lipoprotein cholesterol level (CMO:0000052)111328032813280329Human
2289313BW388_HBody weight QTL 388 (human)1.570.00356Body fat amountabdominal11443467130434671Human
1559107SCL32_HSerum cholesterol level QTL 32 (human)3.27Lipid levelLDL cholesterol11289243028892430Human
596966220GWAS1085739_Hbody mass index QTL GWAS1085739 (human)2e-17body mass index111328032813280329Human
597244645GWAS1340719_Hsex hormone-binding globulin measurement QTL GWAS1340719 (human)1e-18sex hormone-binding globulin measurement111328032813280329Human
597242100GWAS1338174_Hbody fat percentage QTL GWAS1338174 (human)5e-14body fat mass (VT:0010482)body fat percentage (CMO:0000302)111328032813280329Human
1559113SCL31_HSerum cholesterol level QTL 31 (human)3.72Lipid levelLDL cholesterol11289243028892430Human

1 to 10 of 11 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1336149_H GCST90038594 Metabolic biomarkers (multivariate analysis) 389,354 European ancestry individuals G 0.57 1E-12 12 rs72867447 N/A aspartate aminotransferase measurement (EFO:0004736)
serum alanine aminotransferase measurement (EFO:0004735)
low density lipoprotein triglyceride measurement (EFO:0009946)
body fat percentage (EFO:0007800)
More... 		PMID:33980691
GWAS1338174_H GCST90020232 Body fat percentage 442,278 European ancestry individuals G 0.57 5E-14 13.302 rs72867447 0.011 body fat percentage (EFO:0007800)
 PMID:33980691
GWAS1339714_H GCST90020235 Triglycerides 429,011 European ancestry individuals G 0.57 8E-8 7.097 rs72867447 0.011 triglyceride measurement (EFO:0004530)
 PMID:33980691
GWAS1340719_H GCST90020234 Sex hormone-binding globulin levels 389,354 European ancestry individuals G 0.57 1E-18 18 rs72867447 0.016 sex hormone-binding globulin measurement (EFO:0004696)
 PMID:33980691
GWAS1413045_H GCST90435413 Body mass index 403,610 European ancestry individuals ? NR 2E-17 16.699 rs72867447 0.0177906 body mass index (EFO:0004340)
 PMID:39134668
GWAS1436878_H GCST90301650 Body mass index 441,761 European ancestry individuals C NR 6E-18 17.222 rs72867447 0.0167149 body mass index (EFO:0004340)
 PMID:37280435
Database
Acc Id
Source(s)
GWAS Catalog GCST90435413 GWAS Catalog

Note Type Note Reference