GWAS1082728_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1082728_H (glucose measurement QTL GWAS1082728 (human)) Homo sapiens

Symbol: GWAS1082728_H
Name: glucose measurement QTL GWAS1082728 (human)
RGD ID: 596963209
Trait: glucose measurement
LOD Score: Not Available
P Value: 2.0E-18
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38577,129,235 - 77,129,236RGD_MAPPER_PIPELINEGRCh38
GRCh37576,425,060 - 76,425,061RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
6770267ZBED3-AS1ZBED3 antisense RNA 157708671577149301Human
1348334PDE8Bphosphodiesterase 8B57708671577428256Human
151674313LOC124901008uncharacterized LOC12490100857712770877131128Human


Peak: (rs4457054)
Human AssemblyChrPosition (strand)Source
GRCh38577,129,235 - 77,129,236RGD_MAPPER_PIPELINE


1 to 10 of 10 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
596962800GWAS1082319_Hglucose measurement QTL GWAS1082319 (human)1e-14glucose measurement57712923577129236Human
597514937GWAS1611011_Hglucose measurement QTL GWAS1611011 (human)2e-18glucose measurementblood glucose level (CMO:0000046)57712923577129236Human
597513992GWAS1610066_Hglucose measurement QTL GWAS1610066 (human)1e-18glucose measurementblood glucose level (CMO:0000046)57712923577129236Human
407162909GWAS811885_Hglucose measurement QTL GWAS811885 (human)2e-18glucose measurement57712923577129236Human
406983979GWAS632955_Hglucose measurement QTL GWAS632955 (human)1e-14glucose measurement57712923577129236Human
407101369GWAS750345_Hglucose measurement QTL GWAS750345 (human)1e-18glucose measurement57712923577129236Human
597456966GWAS1553040_Hglucose measurement QTL GWAS1553040 (human)1e-14glucose measurementblood glucose level (CMO:0000046)57712923577129236Human
596963209GWAS1082728_Hglucose measurement QTL GWAS1082728 (human)2e-18glucose measurement57712923577129236Human
596963210GWAS1082729_Hglucose measurement QTL GWAS1082729 (human)1e-18glucose measurement57712923577129236Human
597588849GWAS1645709_Hglucose measurement QTL GWAS1645709 (human)2e-19glucose measurementblood glucose level (CMO:0000046)57712923577129236Human

1 to 10 of 10 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1645709_H GCST90479627 Glucose (fasting status unknown, minimum, inv-norm transformed) 118,147 African American or Afro-Caribbean individuals, 57,134 Hispanic or Latin American individuals, 6,299 East Asian ancestry individuals, 419,287 European ancestry individuals G 0.2603 2E-19 18.699 rs4457054 0.02379 glucose measurement (EFO:0004468)
 PMID:39024449
GWAS1553040_H GCST90018955 Glucose levels 314,916 European ancestry individuals, 133,336 East Asian ancestry individuals C NR 1E-14 14 rs4457054 0.0203 glucose measurement (EFO:0004468)
 PMID:34594039
GWAS1610066_H GCST90271558 Random glucose levels 7,644 African ancestry individuals, 1,503 Chinese ancestry individuals, 7,407 Indian, Pakistani ancestry individuals, 458,862 European ancestry individuals C 0.6942 1E-18 18 rs4457054 0.002806817 glucose measurement (EFO:0004468)
 PMID:37679419
GWAS1611011_H GCST90271557 Random glucose levels 458,862 European ancestry individuals C 0.69 2E-18 17.699 rs4457054 0.0028 glucose measurement (EFO:0004468)
 PMID:37679419
Database
Acc Id
Source(s)
GWAS Catalog GCST90271557 GWAS Catalog

Note Type Note Reference