GWAS1044819_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1044819_H (COVID-19 QTL GWAS1044819 (human)) Homo sapiens

Symbol: GWAS1044819_H
Name: COVID-19 QTL GWAS1044819 (human)
RGD ID: 407395843
Trait: COVID-19
LOD Score: Not Available
P Value: 8.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38113,471,716 - 13,471,717RGD_MAPPER_PIPELINEGRCh38
GRCh37113,798,184 - 13,798,185RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1044819_HHumanCOVID-19  IAGPrs6695939405850206 GWAS_CATALOGPMID:35224516
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs6695939)
Human AssemblyChrPosition (strand)Source
GRCh38113,471,716 - 13,471,717RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407395843GWAS1044819_HCOVID-19 QTL GWAS1044819 (human)0.000008COVID-1911347171613471717Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1044819_H GCST90104722 COVID-19 563 cases, 10,446 controls A 0.01550158 0.000008 5.097 rs6695939 1.2057 PMID:35224516
Database Acc Id Source(s)
GWAS Catalog GCST90104722 GWAS Catalog

RGD Curation Notes
Note Type Note Reference