GWAS1035748_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1035748_H (obsolete_red blood cell distribution width QTL GWAS1035748 (human)) Homo sapiens

Symbol: GWAS1035748_H
Name: obsolete_red blood cell distribution width QTL GWAS1035748 (human)
RGD ID: 407386772
Trait: obsolete_red blood cell distribution width
LOD Score: Not Available
P Value: 2.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh385146,278,505 - 146,278,506RGD_MAPPER_PIPELINEGRCh38
GRCh375145,658,068 - 145,658,069RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1323694RBM27RNA binding motif protein 275146203605146289223Human
155751795LOC127814297RBM27-POU4F35146203605146341728Human


Peak: (rs2939523)
Human AssemblyChrPosition (strand)Source
GRCh385146,278,505 - 146,278,506RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357314AASTH54_HAllergic/atopic asthma related QTL 54 (human)3.560.0003Reversible airflow obstructiontotal serum IgE5135892246150155845Human
596950748GWAS1070267_HRed cell distribution width QTL GWAS1070267 (human)2e-10Red cell distribution width5146278505146278506Human
596976732GWAS1096251_HRed cell distribution width QTL GWAS1096251 (human)7e-09Red cell distribution width5146278505146278506Human
597109406GWAS1205480_HRed cell distribution width QTL GWAS1205480 (human)7e-09Red cell distribution widthred blood cell distribution width- standard deviation (CMO:0003232)5146278505146278506Human
597088572GWAS1184646_HRed cell distribution width QTL GWAS1184646 (human)2e-10Red cell distribution widthred blood cell distribution width- standard deviation (CMO:0003232)5146278505146278506Human
407386772GWAS1035748_Hobsolete_red blood cell distribution width QTL GWAS1035748 (human)2e-10obsolete_red blood cell distribution width5146278505146278506Human
407082460GWAS731436_Hobsolete_red blood cell distribution width QTL GWAS731436 (human)7e-09obsolete_red blood cell distribution width5146278505146278506Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1184646_H GCST90002369 Red cell distribution width 531,774 European ancestry individuals C 0.375454 2E-10 9.699 rs2939523 0.012583 Red cell distribution width (EFO:0009188)
 PMID:32888493
GWAS1205480_H GCST90002404 Red cell distribution width 408,112 British individuals A 0.622532 7E-9 8.155 rs2939523 0.013298794 Red cell distribution width (EFO:0009188)
 PMID:32888494
Database
Acc Id
Source(s)
GWAS Catalog GCST90002369 GWAS Catalog

Note Type Note Reference