GWAS966134_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS966134_H (low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS966134 (human)) Homo sapiens

Symbol: GWAS966134_H
Name: low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS966134 (human)
RGD ID: 407317158
Trait: low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio
Measurement Type: blood low density lipoprotein cholesterol level   (CMO:0000053)    
LOD Score: Not Available
P Value: 1.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386160,100,853 - 160,100,854RGD_MAPPER_PIPELINEGRCh38
GRCh376160,521,885 - 160,521,886RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS966134_HHumanblood low density lipoprotein cholesterol level  IAGPrs146203232405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS966134_HHumancholesteryl esters:total lipids ratio  IAGPrs146203232405850206 GWAS_CATALOGPMID:35213538
GWAS966134_HHumanlow density lipoprotein cholesterol measurement  IAGPrs146203232405850206 GWAS_CATALOGPMID:35213538
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
732660IGF2Rinsulin like growth factor 2 receptor6159969082160111504Human

Position Markers

Peak: (rs146203232)
Human AssemblyChrPosition (strand)Source
GRCh386160,100,853 - 160,100,854RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407033152GWAS682128_Htriglycerides in very small VLDL measurement QTL GWAS682128 (human)3e-13triglycerides in very small VLDL measurementblood very low density lipoprotein triglyceride level (CMO:0002688)6160100853160100854Human
407006912GWAS655888_HX-24422 measurement QTL GWAS655888 (human)9e-13X-24422 measurement6160100853160100854Human
407315397GWAS964373_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS964373 (human)9e-12triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)6160100853160100854Human
407182918GWAS831894_Hvery low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS831894 (human)1e-15very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407068356GWAS717332_Htriglycerides in very small VLDL measurement QTL GWAS717332 (human)9e-20triglycerides in very small VLDL measurementblood very low density lipoprotein triglyceride level (CMO:0002688)6160100853160100854Human
407091140GWAS740116_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS740116 (human)3e-16blood lipid amount (VT:0003949)blood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407128789GWAS777765_Htriglycerides in small LDL measurement QTL GWAS777765 (human)9e-18triglycerides in small LDL measurement 6160100853160100854Human
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
407033943GWAS682919_Hcholesterol in very large VLDL measurement QTL GWAS682919 (human)2e-12cholesterol in very large VLDL measurement 6160100853160100854Human
407118291GWAS767267_Htriglycerides in IDL measurement QTL GWAS767267 (human)7e-15triglycerides in IDL measurementblood lipoprotein triglyceride level (CMO:0002685)6160100853160100854Human
407282652GWAS931628_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS931628 (human)3e-17triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)6160100853160100854Human
407052511GWAS701487_Hphospholipids in VLDL measurement QTL GWAS701487 (human)1e-20phospholipids in VLDL measurement 6160100853160100854Human
407076066GWAS725042_Hfree cholesterol measurement QTL GWAS725042 (human)1e-12free cholesterol measurementblood cholesterol level (CMO:0002280)6160100853160100854Human
407055456GWAS704432_Htotal lipids in very small VLDL measurement QTL GWAS704432 (human)1e-22total lipids in very small VLDL measurement6160100853160100854Human
407240161GWAS889137_Htriglyceride measurement, intermediate density lipoprotein measurement QTL GWAS889137 (human)6e-18triglyceride measurement, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)6160100853160100854Human
407291361GWAS940337_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS940337 (human)1e-16very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407036651GWAS685627_Htriglycerides in medium LDL measurement QTL GWAS685627 (human)8e-14metabolite measurement6160100853160100854Human
407312365GWAS961341_Htriacylglycerol 50:0 measurement QTL GWAS961341 (human)2e-08triacylglycerol 50:0 measurement6160100853160100854Human
407329772GWAS978748_Hvery low density lipoprotein cholesterol measurement QTL GWAS978748 (human)7e-18very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407326315GWAS975291_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS975291 (human)6e-14triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)6160100853160100854Human
407144171GWAS793147_Hserum metabolite measurement QTL GWAS793147 (human)2e-18triglyceride measurementblood triglyceride level (CMO:0000118)6160100853160100854Human
407182199GWAS831175_Hcholesteryl ester measurement, very low density lipoprotein cholesterol measurement QTL GWAS831175 (human)7e-16blood lipid amount (VT:0003949)blood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407081337GWAS730313_H1-methylnicotinamide measurement QTL GWAS730313 (human)2e-171-methylnicotinamide measurementblood low density lipoprotein cholesterol level (CMO:0000053)6160100853160100854Human
407331196GWAS980172_Hvery low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS980172 (human)8e-11very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)6160100853160100854Human
407039868GWAS688844_Htotal lipids in VLDL measurement QTL GWAS688844 (human)4e-12total lipids in VLDL measurement 6160100853160100854Human
407323641GWAS972617_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS972617 (human)6e-12very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407239419GWAS888395_Hfamilial hyperlipidemia QTL GWAS888395 (human)2e-15familial hyperlipidemia6160100853160100854Human
407314181GWAS963157_Htriacylglycerol 54:1 measurement QTL GWAS963157 (human)3e-08blood triglyceride amount (VT:0002644)6160100853160100854Human
407029889GWAS678865_Hvery low density lipoprotein cholesterol measurement QTL GWAS678865 (human)3e-15pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407323393GWAS972369_Hfree cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS972369 (human)8e-13free cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407024901GWAS673877_Hphospholipids:total lipids ratio QTL GWAS673877 (human)2e-13phospholipids:total lipids ratio6160100853160100854Human
407037317GWAS686293_Hcholesteryl ester measurement QTL GWAS686293 (human)6e-16blood lipid amount (VT:0003949)6160100853160100854Human
407332736GWAS981712_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS981712 (human)4e-16triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407054602GWAS703578_Hvery low density lipoprotein cholesterol measurement QTL GWAS703578 (human)2e-23very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407185420GWAS834396_Htotal cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS834396 (human)8e-15total cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
407120009GWAS768985_Htotal lipids in IDL QTL GWAS768985 (human)1e-18total lipids in IDL6160100853160100854Human
407072909GWAS721885_Hapolipoprotein A 1 measurement, apolipoprotein B measurement QTL GWAS721885 (human)3e-25apolipoprotein A 1 measurement, apolipoprotein B measurementblood apoliprotein B level (CMO:0000522)6160100853160100854Human
407063963GWAS712939_Hpimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) measurement QTL GWAS712939 (human)1e-13pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) measurement6160100853160100854Human
407090201GWAS739177_Hintermediate density lipoprotein measurement QTL GWAS739177 (human)3e-19intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)6160100853160100854Human
407040671GWAS689647_Htotal lipids in small VLDL QTL GWAS689647 (human)1e-14total cholesterol measurement, very low density lipoprotein cholesterol measurementblood total cholesterol level (CMO:0000051)6160100853160100854Human
407187099GWAS836075_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS836075 (human)1e-17very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)6160100853160100854Human
407317158GWAS966134_Hlow density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS966134 (human)1e-08low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)6160100853160100854Human
407088544GWAS737520_Htriglycerides in IDL measurement QTL GWAS737520 (human)7e-19triglycerides in IDL measurementblood lipoprotein triglyceride level (CMO:0002685)6160100853160100854Human
407110433GWAS759409_Htriglycerides in LDL measurement QTL GWAS759409 (human)2e-14triglycerides in LDL measurement 6160100853160100854Human
407041188GWAS690164_Hmonounsaturated fatty acids; 16:1, 18:1 measurement QTL GWAS690164 (human)6e-10monounsaturated fatty acids; 16:1, 18:1 measurement6160100853160100854Human
407040045GWAS689021_Htriglycerides in large LDL measurement QTL GWAS689021 (human)5e-15triglycerides in large LDL measurement 6160100853160100854Human
407111467GWAS760443_Htriglycerides in large LDL measurement QTL GWAS760443 (human)7e-17triglycerides in large LDL measurement 6160100853160100854Human
407344435GWAS993411_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS993411 (human)2e-10triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)6160100853160100854Human
407260978GWAS909954_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS909954 (human)2e-16triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)6160100853160100854Human
407239097GWAS888073_Hfamilial hyperlipidemia QTL GWAS888073 (human)2e-11very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human
407150778GWAS799754_Hvery low density lipoprotein cholesterol measurement, esterified cholesterol measurement QTL GWAS799754 (human)8e-17very low density lipoprotein cholesterol measurement, esterified cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)6160100853160100854Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS655888_H GCST90266713 Plasma X-24422 levels in chronic kidney disease 4,925 European ancestry individuals T 0.09 9E-13 12.046 rs146203232 0.173 X-24422 measurement (EFO:0800880)
 PMID:37277652
GWAS673877_H GCST90269686 Phospholipids to total lipids in large VLDL percentage (UKB data field 23589) 88,321 European ancestry individuals T 0.0752796 2E-13 12.699 rs146203232 0.0646367 phospholipids:total lipids ratio (EFO:0020946)
 PMID:36764567
GWAS678865_H GCST90269525 Concentration of VLDL particles (UKB data field 23428) 88,329 European ancestry individuals T 0.0752784 3E-15 14.523 rs146203232 0.0706231 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:36764567
GWAS682128_H GCST90269619 Triglycerides in very small VLDL (UKB data field 23522) 88,329 European ancestry individuals T 0.0752784 3E-13 12.523 rs146203232 0.0645207 triglycerides in very small VLDL measurement (EFO:0022144)
 PMID:36764567
GWAS682919_H GCST90269588 Cholesterol in very large VLDL (UKB data field 23491) 88,329 European ancestry individuals T 0.0752784 2E-12 11.699 rs146203232 0.0621104 cholesterol in very large VLDL measurement (EFO:0022230)
 PMID:36764567
None Available GCST90269609 Cholesterol in small VLDL (UKB data field 23512) 88,329 European ancestry individuals T 0.0752784 3E-15 14.523 rs146203232 0.0710176 cholesterol in small VLDL measurement (EFO:0022228)
 PMID:36764567
GWAS685627_H GCST90269640 Triglycerides in medium LDL (UKB data field 23543) 88,329 European ancestry individuals T 0.0752784 8E-14 13.097 rs146203232 0.0659289 triglycerides in medium LDL measurement (EFO:0022322)
 PMID:36764567
GWAS686293_H GCST90269610 Cholesteryl esters in small VLDL (UKB data field 23513) 88,329 European ancestry individuals T 0.0752784 6E-16 15.222 rs146203232 0.0729493 cholesteryl ester measurement (EFO:0010351)
 PMID:36764567
GWAS688844_H GCST90269521 Total lipids in VLDL (UKB data field 23424) 88,329 European ancestry individuals T 0.0752784 4E-12 11.398 rs146203232 0.0613063 total lipids in VLDL measurement (EFO:0022314)
 PMID:36764567
GWAS689021_H GCST90269633 Triglycerides in large LDL (UKB data field 23536) 88,329 European ancestry individuals T 0.0752784 5E-15 14.302 rs146203232 0.06923 triglycerides in large LDL measurement (EFO:0022319)
 PMID:36764567
GWAS689647_H GCST90269607 Total lipids in small VLDL (UKB data field 23510) 88,329 European ancestry individuals T 0.0752784 1E-14 14 rs146203232 0.0686074 total lipids in small VLDL (EFO:0022148)
 PMID:36764567
None Available GCST90269606 Concentration of small VLDL particles (UKB data field 23509) 88,329 European ancestry individuals T 0.0752784 1E-14 14 rs146203232 0.0688741 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:36764567
GWAS690164_H GCST90269544 Monounsaturated fatty acids levels (UKB data field 23447) 88,268 European ancestry individuals T 0.0752622 6E-10 9.222 rs146203232 0.0551892 monounsaturated fatty acids (EFO:0022187)
 PMID:36764567
GWAS701487_H GCST90302158 Phospholipids in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 1E-20 20 rs146203232 0.0734 phospholipids in VLDL measurement (EFO:0022301)
 PMID:38448586
GWAS703578_H GCST90302157 Concentration of very small VLDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 2E-23 22.699 rs146203232 0.0781 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:38448586
GWAS704432_H GCST90302156 Total lipids in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 1E-22 22 rs146203232 0.0768 total lipids in very small VLDL measurement (EFO:0022156)
 PMID:38448586
None Available GCST90265018 Urine diacetylspermidine* levels in chronic kidney disease 4,840 European ancestry individuals T 0.09 8E-14 13.097 rs146203232 0.197 metabolite measurement (EFO:0004725)
 PMID:37277652
None Available GCST90265848 Plasma pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) levels in chronic kidney disease 4,850 European ancestry individuals T 0.09 3E-15 14.523 rs146203232 0.207 pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) measurement (EFO:0800494)
 PMID:37277652
GWAS712939_H GCST90265849 Urine pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) levels in chronic kidney disease 4,905 European ancestry individuals T 0.09 1E-13 13 rs146203232 0.211 pimeloylcarnitine/3-methyladipoylcarnitine (C7-DC) measurement (EFO:0800494)
 PMID:37277652
GWAS717332_H GCST90302160 Triglycerides in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 9E-20 19.046 rs146203232 0.072 triglycerides in very small VLDL measurement (EFO:0022144)
 PMID:38448586
GWAS721885_H GCST90301947 Ratio of apolipoprotein B to apolipoprotein A1 levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0726 3E-25 24.523 rs146203232 0.0822 apolipoprotein A 1 measurement (EFO:0004614)
apolipoprotein B measurement (EFO:0004615)
 PMID:38448586
GWAS725042_H GCST90301963 Free cholesterol levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0724 1E-12 12 rs146203232 0.0558 free cholesterol measurement (EFO:0008591)
 PMID:38448586
GWAS730313_H GCST90244918 1-methylnicotinamide levels 14,296 European ancestry individuals T 0.0812 2E-17 16.699 rs146203232 0.15702406 1-methylnicotinamide measurement (EFO:0021829)
 PMID:36357675
GWAS737520_H GCST90301985 Triglycerides in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 7E-19 18.155 rs146203232 0.0701 triglycerides in IDL measurement (EFO:0022149)
 PMID:38448586
None Available GCST90302048 Free cholesterol to total lipids ratio in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0727 2E-17 16.699 rs146203232 0.0687 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:38448586
GWAS739177_H GCST90301982 Concentration of IDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 3E-19 18.523 rs146203232 0.0707 intermediate density lipoprotein measurement (EFO:0008595)
 PMID:38448586
GWAS740116_H GCST90301993 Triglyceride levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0726 3E-16 15.523 rs146203232 0.0648 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS759409_H GCST90269506 Triglycerides in LDL (UKB data field 23409) 88,329 European ancestry individuals T 0.0752784 2E-14 13.699 rs146203232 0.0680026 triglycerides in LDL measurement (EFO:0022320)
 PMID:36764567
GWAS760443_H GCST90302017 Triglycerides in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 7E-17 16.155 rs146203232 0.0659 triglycerides in large LDL measurement (EFO:0022319)
 PMID:38448586
None Available GCST90302016 Phospholipids to total lipids ratio in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0726 3E-16 15.523 rs146203232 0.0661 low density lipoprotein cholesterol measurement (EFO:0004611)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:38448586
GWAS767267_H GCST90269626 Triglycerides in IDL (UKB data field 23529) 88,329 European ancestry individuals T 0.0752784 7E-15 14.155 rs146203232 0.0687635 triglycerides in IDL measurement (EFO:0022149)
 PMID:36764567
GWAS768985_H GCST90301981 Total lipids in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 1E-18 18 rs146203232 0.0692 total lipids in IDL (EFO:0022161)
 PMID:38448586
GWAS777765_H GCST90302101 Triglycerides in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0726 9E-18 17.046 rs146203232 0.0681 triglycerides in small LDL measurement (EFO:0022323)
 PMID:38448586
None Available GCST90302053 Triglycerides in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 1E-14 14 rs146203232 0.0613 triglycerides in medium LDL measurement (EFO:0022322)
 PMID:38448586
GWAS793147_H GCST005648 Serum metabolite concentrations in chronic kidney disease 1,143 European ancestry cases T NR 2E-18 17.699 rs146203232 0.541769 serum metabolite measurement (EFO:0005653)
 PMID:29545352
GWAS799754_H GCST90302152 Cholesterol esters in very small VLDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals T 0.0725 8E-17 16.097 rs146203232 0.0655 very low density lipoprotein cholesterol measurement (EFO:0008317)
esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
GWAS831175_H GCST90092870 Cholesteryl ester levels in large VLDL 115,082 European ancestry individuals C 0.925338 7E-16 15.155 rs146203232 0.0628465 cholesteryl ester measurement (EFO:0010351)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS831894_H GCST90092877 Phospholipids to total lipids ratio in large VLDL 115,071 European ancestry individuals C 0.925336 1E-15 15 rs146203232 0.0613784 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
GWAS834396_H GCST90092868 Cholesterol levels in large VLDL 115,082 European ancestry individuals C 0.925338 8E-15 14.097 rs146203232 0.0598181 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS836075_H GCST90092866 Triglyceride levels in large LDL 115,082 European ancestry individuals C 0.925338 1E-17 17 rs146203232 0.0659743 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS888073_H GCST90104005 Familial combined hyperlipidemia defined by Dutch criteria 17,485 British ancestry cases, 331,737 British ancestry controls C 0.925143 2E-11 10.699 rs146203232 0.138159 PMID:34906840
GWAS888395_H GCST90104006 Familial combined hyperlipidemia defined by Consensus criteria 39,961 British ancestry cases, 309,261 British ancestry controls C 0.925143 2E-15 14.699 rs146203232 0.114613 PMID:34906840
GWAS889137_H GCST90092841 Triglyceride levels in IDL 115,082 European ancestry individuals C 0.925338 6E-18 17.222 rs146203232 0.0665111 triglyceride measurement (EFO:0004530)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS909954_H GCST90092914 Triglyceride levels in medium LDL 115,082 European ancestry individuals C 0.925338 2E-16 15.699 rs146203232 0.0633078 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS931628_H GCST90092890 Triglyceride levels in LDL 115,082 European ancestry individuals C 0.925338 3E-17 16.523 rs146203232 0.0651159 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
None Available GCST90092895 Cholesteryl esters to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.925338 2E-11 10.699 rs146203232 0.0512029 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS940337_H GCST90093001 Phospholipid levels in VLDL 115,082 European ancestry individuals C 0.925338 1E-16 16 rs146203232 0.064585 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS961341_H GCST90024540 Triacylglycerol (50:0) [NL-18:0] levels 4,492 European ancestry individuals T NR 2E-8 7.699 rs146203232 0.229 triacylglycerol 50:0 measurement (EFO:0021480)
 PMID:35668104
None Available GCST90093018 Cholesteryl ester levels in very large VLDL 115,082 European ancestry individuals C 0.925338 3E-16 15.523 rs146203232 0.0633202 cholesteryl ester measurement (EFO:0010351)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS963157_H GCST90024563 Triacylglycerol (54:1) [NL-18:1] levels 4,492 European ancestry individuals T NR 3E-8 7.523 rs146203232 0.227 triacylglycerol 54:1 measurement (EFO:0010419)
 PMID:35668104
None Available GCST90092974 Total lipid levels in small VLDL 115,082 European ancestry individuals C 0.925338 1E-17 17 rs146203232 0.0666875 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS964373_H GCST90092955 Triglycerides to total lipids ratio in small HDL 115,082 European ancestry individuals C 0.925338 9E-12 11.046 rs146203232 0.0509989 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS966134_H GCST90092959 Cholesteryl esters to total lipids ratio in small LDL 115,082 European ancestry individuals C 0.925338 1E-8 8 rs146203232 0.0447624 low density lipoprotein cholesterol measurement (EFO:0004611)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
None Available GCST90179149 Triglyceride levels (MTAG) 361,194 European ancestry individuals T NR 2E-18 17.699 rs146203232 0.041297 triglyceride measurement (EFO:0004530)
 PMID:36376304
None Available GCST90093023 Concentration of very large VLDL particles 115,082 European ancestry individuals C 0.925338 2E-11 10.699 rs146203232 0.0507857 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS972369_H GCST90093020 Free cholesterol levels in very large VLDL 115,082 European ancestry individuals C 0.925338 8E-13 12.097 rs146203232 0.0546175 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS972617_H GCST90093024 Phospholipid levels in very large VLDL 115,082 European ancestry individuals C 0.925338 6E-12 11.222 rs146203232 0.0523572 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS975291_H GCST90092966 Triglyceride levels in small LDL 115,082 European ancestry individuals C 0.925338 6E-14 13.222 rs146203232 0.0574635 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
None Available GCST90093016 Cholesterol levels in very large VLDL 115,082 European ancestry individuals C 0.925338 1E-14 14 rs146203232 0.0594577 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS978748_H GCST90092975 Concentration of small VLDL particles 115,082 European ancestry individuals C 0.925338 7E-18 17.155 rs146203232 0.0668614 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS980172_H GCST90093022 Total lipid levels in very large VLDL 115,082 European ancestry individuals C 0.925338 8E-11 10.097 rs146203232 0.0493292 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS981712_H GCST90093038 Triglyceride levels in very small VLDL 115,082 European ancestry individuals C 0.925338 4E-16 15.398 rs146203232 0.0624999 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS993411_H GCST90093014 Triglyceride levels in very large HDL 115,082 European ancestry individuals C 0.925338 2E-10 9.699 rs146203232 0.0488877 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
Database Acc Id Source(s)
GWAS Catalog GCST90092959 GWAS Catalog

RGD Curation Notes
Note Type Note Reference