GWAS958927_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS958927_H (chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS958927 (human)) Homo sapiens

Symbol: GWAS958927_H
Name: chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS958927 (human)
RGD ID: 407309951
Trait: chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement
Measurement Type: blood chylomicron level   (CMO:0000527)    
blood total cholesterol level   (CMO:0000051)    
blood very low density lipoprotein cholesterol level   (CMO:0000648)    
LOD Score: Not Available
P Value: 1.0E-21
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38819,945,573 - 19,945,574RGD_MAPPER_PIPELINEGRCh38
GRCh37819,803,084 - 19,803,085RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS958927_HHumanblood chylomicron level  IAGPrs6999612405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS958927_HHumanblood total cholesterol level  IAGPrs6999612405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS958927_HHumanblood very low density lipoprotein cholesterol level  IAGPrs6999612405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538

Experimental Factor Annotations    Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
70836LPLlipoprotein lipase81993925319967259Human

Position Markers

Peak: (rs6999612)
Human AssemblyChrPosition (strand)Source
GRCh38819,945,573 - 19,945,574RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407316679GWAS965655_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS965655 (human)2e-38triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407296837GWAS945813_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS945813 (human)3e-17very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407318980GWAS967956_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS967956 (human)1e-24triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407239371GWAS888347_Htriglycerides:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS888347 (human)7e-25triglycerides:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)81994557319945574Human
407266262GWAS915238_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS915238 (human)8e-24total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407269461GWAS918437_Hcholesterol:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS918437 (human)9e-30cholesterol:total lipids ratio, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)81994557319945574Human
407330001GWAS978977_Htriglyceride measurement, phospholipid measurement QTL GWAS978977 (human)1e-35triglyceride measurement, phospholipid measurementblood triglyceride level (CMO:0000118)81994557319945574Human
407184978GWAS833954_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS833954 (human)3e-22blood lipid amount (VT:0003949)blood lipid measurement (CMO:0000050)81994557319945574Human
407308255GWAS957231_Hhigh density lipoprotein cholesterol measurement QTL GWAS957231 (human)3e-27high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407340765GWAS989741_Hcholesteryl ester measurement, chylomicron measurement, very low density lipoprotein cholesterol measurement QTL GWAS989741 (human)5e-22blood lipid amount (VT:0003949)blood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407345885GWAS994861_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS994861 (human)8e-11phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407261657GWAS910633_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS910633 (human)9e-27low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
1298482BP2_HBlood pressure QTL 2 (human)1.8Blood pressurediastolic8695325632953256Human
407190113GWAS839089_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS839089 (human)2e-29triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407287778GWAS936754_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS936754 (human)6e-15very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407308142GWAS957118_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS957118 (human)2e-21chylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407333611GWAS982587_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS982587 (human)2e-27triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407339243GWAS988219_Hchylomicron measurement, very low density lipoprotein cholesterol measurement QTL GWAS988219 (human)9e-20chylomicron measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407240426GWAS889402_Htriglyceride measurement, intermediate density lipoprotein measurement QTL GWAS889402 (human)4e-19triglyceride measurement, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)81994557319945574Human
407328119GWAS977095_Htotal cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS977095 (human)4e-24triglyceride measurementblood triglyceride level (CMO:0000118)81994557319945574Human
407282167GWAS931143_Hcholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS931143 (human)7e-27cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407342325GWAS991301_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS991301 (human)1e-10free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
1558703SCL6_HSerum cholesterol level QTL 1 (human)1.2Lipid levelHDL cholesterol81246863538468635Human
407309951GWAS958927_Hchylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS958927 (human)1e-21chylomicron measurement, total cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407181436GWAS830412_Htotal cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS830412 (human)1e-25very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407260031GWAS909007_Hlow density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS909007 (human)4e-08low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407184507GWAS833483_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS833483 (human)5e-15triglycerides:total lipids ratio, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407166970GWAS815946_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS815946 (human)5e-21very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407331705GWAS980681_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS980681 (human)7e-29very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407346552GWAS995528_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS995528 (human)2e-10lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407325189GWAS974165_Hvery low density lipoprotein cholesterol measurement QTL GWAS974165 (human)9e-26very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407310479GWAS959455_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS959455 (human)5e-17chylomicron measurement, very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)81994557319945574Human
407285388GWAS934364_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS934364 (human)4e-25triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407258893GWAS907869_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS907869 (human)7e-32triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407309449GWAS958425_Hchylomicron measurement, triglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS958425 (human)3e-13blood lipid amount (VT:0003949)blood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407322261GWAS971237_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS971237 (human)5e-26very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407193494GWAS842470_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS842470 (human)1e-29low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407290770GWAS939746_Hfree cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS939746 (human)4e-18free cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407167506GWAS816482_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS816482 (human)1e-22lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407314206GWAS963182_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS963182 (human)6e-25free cholesterol measurement, very low density lipoprotein cholesterol measurementblood cholesterol level (CMO:0002280)81994557319945574Human
407310237GWAS959213_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS959213 (human)2e-22triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407266717GWAS915693_Hhigh density lipoprotein particle size measurement QTL GWAS915693 (human)1e-17high density lipoprotein particle size measurementblood high density lipoprotein particle diameter (CMO:0002692)81994557319945574Human
407283482GWAS932458_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS932458 (human)2e-17very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood lipid measurement (CMO:0000050)81994557319945574Human
407294491GWAS943467_Hlow density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS943467 (human)2e-11low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407330458GWAS979434_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS979434 (human)6e-32triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407316506GWAS965482_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS965482 (human)5e-12total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407182497GWAS831473_Hcholesteryl ester measurement, very low density lipoprotein cholesterol measurement QTL GWAS831473 (human)2e-23blood lipid amount (VT:0003949)blood very low density lipoprotein particle diameter (CMO:0002694)81994557319945574Human
407298339GWAS947315_Hfatty acid measurement QTL GWAS947315 (human)1e-18triglycerides:total lipids ratio, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407180973GWAS829949_Hfree cholesterol measurement, very low density lipoprotein cholesterol measurement QTL GWAS829949 (human)8e-27free cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407320111GWAS969087_Hvery low density lipoprotein cholesterol measurement QTL GWAS969087 (human)5e-27very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407326511GWAS975487_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS975487 (human)2e-25triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407182255GWAS831231_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS831231 (human)8e-28very low density lipoprotein cholesterol measurement, phospholipid measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human
407325997GWAS974973_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS974973 (human)8e-20low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)81994557319945574Human
407242412GWAS891388_Hcholesteryl esters:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS891388 (human)3e-29blood lipid amount (VT:0003949)blood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407195690GWAS844666_Hcholesteryl ester measurement, high density lipoprotein cholesterol measurement QTL GWAS844666 (human)2e-24blood lipid amount (VT:0003949)blood lipid measurement (CMO:0000050)81994557319945574Human
407257396GWAS906372_Hfatty acid measurement QTL GWAS906372 (human)5e-14fatty acid measurement81994557319945574Human
407184574GWAS833550_Hvery low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS833550 (human)3e-25very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)81994557319945574Human
407181370GWAS830346_Hvery low density lipoprotein cholesterol measurement QTL GWAS830346 (human)1e-26triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)81994557319945574Human
407198906GWAS847882_Hhigh density lipoprotein cholesterol measurement QTL GWAS847882 (human)2e-20free cholesterol measurement, chylomicron measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)81994557319945574Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS815946_H GCST90092848 Free cholesterol levels in large HDL 115,082 European ancestry individuals T 0.981904 5E-21 20.302 rs6999612 0.128315 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS816482_H GCST90092850 Total lipid levels in large HDL 115,082 European ancestry individuals T 0.981904 1E-22 22 rs6999612 0.133719 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS829949_H GCST90092872 Free cholesterol levels in large VLDL 115,082 European ancestry individuals T 0.981904 8E-27 26.097 rs6999612 0.160845 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS830346_H GCST90092875 Concentration of large VLDL particles 115,082 European ancestry individuals T 0.981904 1E-26 26 rs6999612 0.1601 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS830412_H GCST90092868 Cholesterol levels in large VLDL 115,082 European ancestry individuals T 0.981904 1E-25 25 rs6999612 0.159096 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS831231_H GCST90092876 Phospholipid levels in large VLDL 115,082 European ancestry individuals T 0.981904 8E-28 27.097 rs6999612 0.163714 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS831473_H GCST90092870 Cholesteryl ester levels in large VLDL 115,082 European ancestry individuals T 0.981904 2E-23 22.699 rs6999612 0.15344 cholesteryl ester measurement (EFO:0010351)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092877 Phospholipids to total lipids ratio in large VLDL 115,071 European ancestry individuals T 0.981902 1E-25 25 rs6999612 0.157725 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
GWAS833483_H GCST90092867 Triglycerides to total lipids ratio in large LDL 115,082 European ancestry individuals T 0.981904 5E-15 14.302 rs6999612 0.118381 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS833550_H GCST90092874 Total lipid levels in large VLDL 115,082 European ancestry individuals T 0.981904 3E-25 24.523 rs6999612 0.155776 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS833954_H GCST90092878 Triglyceride levels in large VLDL 115,082 European ancestry individuals T 0.981904 3E-22 21.523 rs6999612 0.145036 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092852 Phospholipid levels in large HDL 115,082 European ancestry individuals T 0.981904 2E-23 22.699 rs6999612 0.13659 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS839089_H GCST90092855 Triglycerides to total lipids ratio in large HDL 115,082 European ancestry individuals T 0.981904 2E-29 28.699 rs6999612 0.164387 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS842470_H GCST90092861 Free cholesterol to total lipids ratio in large LDL 115,082 European ancestry individuals T 0.981904 1E-29 29 rs6999612 0.166532 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS844666_H GCST90092846 Cholesteryl ester levels in large HDL 115,082 European ancestry individuals T 0.981904 2E-24 23.699 rs6999612 0.139978 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS847882_H GCST90092851 Concentration of large HDL particles 115,082 European ancestry individuals T 0.981904 2E-20 19.699 rs6999612 0.126278 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS888347_H GCST90092842 Triglycerides to total lipids ratio in IDL 115,082 European ancestry individuals T 0.981904 7E-25 24.155 rs6999612 0.15351 triglycerides:total lipids ratio (EFO:0020947)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS889402_H GCST90092841 Triglyceride levels in IDL 115,082 European ancestry individuals T 0.981904 4E-19 18.398 rs6999612 0.135469 triglyceride measurement (EFO:0004530)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS891388_H GCST90092834 Cholesteryl esters to total lipids ratio in IDL 115,082 European ancestry individuals T 0.981904 3E-29 28.523 rs6999612 0.169784 cholesteryl esters:total lipids ratio (EFO:0020944)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
None Available GCST90092823 Cholesteryl ester levels in HDL 115,082 European ancestry individuals T 0.981904 3E-29 28.523 rs6999612 0.156661 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092929 Ratio of monounsaturated fatty acids to total fatty acids 115,006 European ancestry individuals T 0.981909 2E-23 22.699 rs6999612 0.148434 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS906372_H GCST90092928 Monounsaturated fatty acid levels 115,006 European ancestry individuals T 0.981909 5E-14 13.302 rs6999612 0.115439 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS907869_H GCST90092903 Triglycerides to total lipids ratio in medium HDL 115,082 European ancestry individuals T 0.981904 7E-32 31.155 rs6999612 0.174361 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS909007_H GCST90092913 Phospholipids to total lipids ratio in medium LDL 115,082 European ancestry individuals T 0.981904 4E-8 7.398 rs6999612 0.0849161 low density lipoprotein cholesterol measurement (EFO:0004611)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
GWAS910633_H GCST90092909 Free cholesterol to total lipids ratio in medium LDL 115,082 European ancestry individuals T 0.981904 9E-27 26.046 rs6999612 0.158511 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS915238_H GCST90092844 Cholesterol levels in large HDL 115,082 European ancestry individuals T 0.981904 8E-24 23.097 rs6999612 0.137837 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS915693_H GCST90092828 Average diameter for HDL particles 115,082 European ancestry individuals T 0.981904 1E-17 17 rs6999612 0.117576 high density lipoprotein particle size measurement (EFO:0008592)
 PMID:35213538
GWAS918437_H GCST90092832 Cholesterol to total lipids ratio in IDL 115,082 European ancestry individuals T 0.981904 9E-30 29.046 rs6999612 0.171102 cholesterol:total lipids ratio (EFO:0020943)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS931143_H GCST90092893 Cholesterol to total lipids ratio in medium HDL 115,082 European ancestry individuals T 0.981904 7E-27 26.155 rs6999612 0.15845 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS932458_H GCST90092897 Free cholesterol to total lipids ratio in medium HDL 115,082 European ancestry individuals T 0.981904 2E-17 16.699 rs6999612 0.117446 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092895 Cholesteryl esters to total lipids ratio in medium HDL 115,082 European ancestry individuals T 0.981904 2E-23 22.699 rs6999612 0.149746 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS934364_H GCST90092926 Triglyceride levels in medium VLDL 115,082 European ancestry individuals T 0.981904 4E-25 24.398 rs6999612 0.155959 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS936754_H GCST90092917 Cholesterol to total lipids ratio in medium VLDL 115,082 European ancestry individuals T 0.981904 6E-15 14.222 rs6999612 0.113921 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS939746_H GCST90092998 Free cholesterol levels in VLDL 115,082 European ancestry individuals T 0.981904 4E-18 17.398 rs6999612 0.133743 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093001 Phospholipid levels in VLDL 115,082 European ancestry individuals T 0.981904 5E-21 20.302 rs6999612 0.144208 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
None Available GCST90092999 Total lipid levels in VLDL 115,082 European ancestry individuals T 0.981904 3E-22 21.523 rs6999612 0.147462 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
None Available GCST90092922 Total lipid levels in medium VLDL 115,082 European ancestry individuals T 0.981904 2E-17 16.699 rs6999612 0.130711 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS943467_H GCST90092907 Cholesteryl esters to total lipids ratio in medium LDL 115,082 European ancestry individuals T 0.981904 2E-11 10.699 rs6999612 0.10448 low density lipoprotein cholesterol measurement (EFO:0004611)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS945813_H GCST90092919 Cholesteryl esters to total lipids ratio in medium VLDL 115,082 European ancestry individuals T 0.981904 3E-17 16.523 rs6999612 0.122697 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS947315_H GCST90092940 Ratio of polyunsaturated fatty acids to monounsaturated fatty acids 115,006 European ancestry individuals T 0.981909 1E-18 18 rs6999612 0.130948 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS957118_H GCST90093048 Phospholipid levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 2E-21 20.699 rs6999612 0.141352 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS957231_H GCST90092822 HDL cholesterol levels 115,082 European ancestry individuals T 0.981904 3E-27 26.523 rs6999612 0.150444 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS958425_H GCST90093050 Triglyceride levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 3E-13 12.523 rs6999612 0.109472 chylomicron measurement (EFO:0008596)
triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093044 Free cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 2E-20 19.699 rs6999612 0.138757 free cholesterol measurement (EFO:0008591)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS958927_H GCST90093040 Cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 1E-21 21 rs6999612 0.143112 chylomicron measurement (EFO:0008596)
total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS959213_H GCST90093039 Triglycerides to total lipids ratio in very small VLDL 115,082 European ancestry individuals T 0.981904 2E-22 21.699 rs6999612 0.143543 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS959455_H GCST90093046 Total lipid levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 5E-17 16.302 rs6999612 0.125452 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
None Available GCST90093018 Cholesteryl ester levels in very large VLDL 115,082 European ancestry individuals T 0.981904 3E-22 21.523 rs6999612 0.148409 cholesteryl ester measurement (EFO:0010351)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092973 Free cholesterol to total lipids ratio in small VLDL 115,082 European ancestry individuals T 0.981904 2E-17 16.699 rs6999612 0.125951 very low density lipoprotein cholesterol measurement (EFO:0008317)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS963182_H GCST90093024 Phospholipid levels in very large VLDL 115,082 European ancestry individuals T 0.981904 6E-25 24.222 rs6999612 0.154569 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
None Available GCST90093003 Triglyceride levels in VLDL 115,082 European ancestry individuals T 0.981904 2E-24 23.699 rs6999612 0.152088 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS965482_H GCST90093004 Cholesterol levels in very large HDL 115,082 European ancestry individuals T 0.981904 5E-12 11.302 rs6999612 0.0968272 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS965655_H GCST90092955 Triglycerides to total lipids ratio in small HDL 115,082 European ancestry individuals T 0.981904 2E-38 37.699 rs6999612 0.190955 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS967956_H GCST90092954 Triglyceride levels in small HDL 115,082 European ancestry individuals T 0.981904 1E-24 24 rs6999612 0.153697 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS969087_H GCST90092975 Concentration of small VLDL particles 115,082 European ancestry individuals T 0.981904 5E-27 26.302 rs6999612 0.164487 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093020 Free cholesterol levels in very large VLDL 115,082 European ancestry individuals T 0.981904 6E-25 24.222 rs6999612 0.155012 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS971237_H GCST90093029 Cholesterol to total lipids ratio in very small VLDL 115,082 European ancestry individuals T 0.981904 5E-26 25.302 rs6999612 0.154813 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS974165_H GCST90093023 Concentration of very large VLDL particles 115,082 European ancestry individuals T 0.981904 9E-26 25.046 rs6999612 0.156466 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092967 Triglycerides to total lipids ratio in small LDL 115,082 European ancestry individuals T 0.981904 1E-18 18 rs6999612 0.132004 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS974973_H GCST90092961 Free cholesterol to total lipids ratio in small LDL 115,082 European ancestry individuals T 0.981904 8E-20 19.097 rs6999612 0.136407 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS975487_H GCST90092966 Triglyceride levels in small LDL 115,082 European ancestry individuals T 0.981904 2E-25 24.699 rs6999612 0.157361 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS977095_H GCST90093016 Cholesterol levels in very large VLDL 115,082 European ancestry individuals T 0.981904 4E-24 23.398 rs6999612 0.153642 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90092992 Total triglycerides levels 115,082 European ancestry individuals T 0.981904 4E-24 23.398 rs6999612 0.151728 triglyceride measurement (EFO:0004530)
 PMID:35213538
GWAS978977_H GCST90092983 Ratio of triglycerides to phosphoglycerides 115,006 European ancestry individuals T 0.981909 1E-35 35 rs6999612 0.179658 triglyceride measurement (EFO:0004530)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS979434_H GCST90092978 Triglyceride levels in small VLDL 115,082 European ancestry individuals T 0.981904 6E-32 31.222 rs6999612 0.176228 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093022 Total lipid levels in very large VLDL 115,082 European ancestry individuals T 0.981904 2E-24 23.699 rs6999612 0.152105 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
GWAS980681_H GCST90093031 Cholesteryl esters to total lipids ratio in very small VLDL 115,082 European ancestry individuals T 0.981904 7E-29 28.155 rs6999612 0.162499 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
None Available GCST90093026 Triglyceride levels in very large VLDL 115,082 European ancestry individuals T 0.981904 2E-23 22.699 rs6999612 0.14783 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS982587_H GCST90093038 Triglyceride levels in very small VLDL 115,082 European ancestry individuals T 0.981904 2E-27 26.699 rs6999612 0.16379 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093015 Triglycerides to total lipids ratio in very large HDL 115,056 European ancestry individuals T 0.9819 1E-26 26 rs6999612 0.155726 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS988219_H GCST90093047 Concentration of chylomicrons and extremely large VLDL particles 115,082 European ancestry individuals T 0.981904 9E-20 19.046 rs6999612 0.135828 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS989741_H GCST90093042 Cholesteryl ester levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals T 0.981904 5E-22 21.302 rs6999612 0.144758 cholesteryl ester measurement (EFO:0010351)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS991301_H GCST90093009 Free cholesterol to total lipids ratio in very large HDL 115,056 European ancestry individuals T 0.9819 1E-10 10 rs6999612 0.088692 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093002 Average diameter for VLDL particles 115,082 European ancestry individuals T 0.981904 2E-23 22.699 rs6999612 0.144428 very low density lipoprotein particle size measurement (EFO:0008594)
 PMID:35213538
GWAS994861_H GCST90093012 Phospholipid levels in very large HDL 115,082 European ancestry individuals T 0.981904 8E-11 10.097 rs6999612 0.0908691 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093006 Cholesteryl ester levels in very large HDL 115,082 European ancestry individuals T 0.981904 3E-13 12.523 rs6999612 0.101539 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS995528_H GCST90093010 Total lipid levels in very large HDL 115,082 European ancestry individuals T 0.981904 2E-10 9.699 rs6999612 0.0885852 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
Database Acc Id Source(s)
GWAS Catalog GCST90093040 GWAS Catalog

RGD Curation Notes
Note Type Note Reference