GWAS943862_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS943862_H (very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS943862 (human)) Homo sapiens

Symbol: GWAS943862_H
Name: very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS943862 (human)
RGD ID: 407294886
Trait: very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio
Measurement Type: blood chylomicron level   (CMO:0000527)    
blood very low density lipoprotein cholesterol level   (CMO:0000648)    
LOD Score: Not Available
P Value: 2.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381542,409,176 - 42,409,177RGD_MAPPER_PIPELINEGRCh38
GRCh371542,701,374 - 42,701,375RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS943862_HHumanblood chylomicron level  IAGPrs28364531405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS943862_HHumanblood very low density lipoprotein cholesterol level  IAGPrs28364531405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538

Experimental Factor Annotations    Click to see Annotation Detail View
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
731876CAPN3calpain 3154235950142412317Human

Position Markers

Peak: (rs28364531)
Human AssemblyChrPosition (strand)Source
GRCh381542,409,176 - 42,409,177RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407319879GWAS968855_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS968855 (human)2e-12triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
407256068GWAS905044_Hfatty acid measurement QTL GWAS905044 (human)5e-08fatty acid measurement154240917642409177Human
407277252GWAS926228_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS926228 (human)6e-09triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
407329605GWAS978581_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS978581 (human)9e-15triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407268357GWAS917333_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS917333 (human)3e-09triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
407319043GWAS968019_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS968019 (human)4e-11triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407325440GWAS974416_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS974416 (human)1e-11triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407188236GWAS837212_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS837212 (human)5e-21low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407239950GWAS888926_Htriglyceride measurement, intermediate density lipoprotein measurement QTL GWAS888926 (human)4e-13triglyceride measurement, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)154240917642409177Human
407324684GWAS973660_Htriglyceride measurement QTL GWAS973660 (human)7e-17triglyceride measurementblood triglyceride level (CMO:0000118)154240917642409177Human
407310987GWAS959963_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS959963 (human)2e-15triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407281416GWAS930392_Hcholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS930392 (human)1e-09cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
1643273BW330_HBody Weight QTL 330 (human)1.050.014Body weightbody mass index152686671952866719Human
407255703GWAS904679_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS904679 (human)7e-10triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407318356GWAS967332_Htriglycerides:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS967332 (human)2e-11triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
407166160GWAS815136_Hcholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS815136 (human)2e-09triglycerides:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)154240917642409177Human
407159056GWAS808032_Htriglyceride measurement QTL GWAS808032 (human)2e-31triglyceride measurementblood triglyceride level (CMO:0000118)154240917642409177Human
407182545GWAS831521_Hvery low density lipoprotein cholesterol measurement QTL GWAS831521 (human)4e-08very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)154240917642409177Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
407327953GWAS976929_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS976929 (human)4e-12low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407319888GWAS968864_Hvery low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS968864 (human)3e-13very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407182557GWAS831533_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS831533 (human)1e-08triglyceride measurement, very low density lipoprotein cholesterol measurementblood triglyceride level (CMO:0000118)154240917642409177Human
407311518GWAS960494_Hvery low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS960494 (human)2e-13very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
1643523BW284_HBody Weight QTL 284 (human)1.950.0013Body weight152179288947792889Human
407315995GWAS964971_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS964971 (human)4e-14triglycerides:total lipids ratio, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407338843GWAS987819_Hchylomicron measurement, very low density lipoprotein cholesterol measurement QTL GWAS987819 (human)3e-08chylomicron measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407287067GWAS936043_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS936043 (human)3e-11very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407310488GWAS959464_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS959464 (human)8e-18triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
2289410BW327_HBody weight QTL 327 (human)3.320.0001Body fat amount151998012945980129Human
407256230GWAS905206_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS905206 (human)7e-13triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407294886GWAS943862_Hvery low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS943862 (human)2e-08very low density lipoprotein cholesterol measurementblood chylomicron level (CMO:0000527)154240917642409177Human
407258340GWAS907316_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS907316 (human)1e-10very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
407282340GWAS931316_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS931316 (human)1e-12triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
1559411SCL107_HSerum cholesterol level QTL 107 (human)3.88Lipid leveltriglyceride152654355252543552Human
407191008GWAS839984_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS839984 (human)3e-12triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human
407329826GWAS978802_Htriglyceride measurement, phospholipid measurement QTL GWAS978802 (human)9e-10triglyceride measurement, phospholipid measurementblood triglyceride level (CMO:0000118)154240917642409177Human
407329760GWAS978736_Htriglyceride measurement QTL GWAS978736 (human)5e-10triglyceride measurementblood triglyceride level (CMO:0000118)154240917642409177Human
407289455GWAS938431_Htriglyceride measurement, very low density lipoprotein cholesterol measurement QTL GWAS938431 (human)8e-09triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)154240917642409177Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
407167273GWAS816249_Hcholesteryl esters:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS816249 (human)4e-09free cholesterol measurement, chylomicron measurement, very low density lipoprotein cholesterol measurementblood triglyceride level (CMO:0000118)154240917642409177Human
2289420BW314_HBody weight QTL 314 (human)2.720.0003Body weightlean mass151998012945980129Human
407289142GWAS938118_Hfatty acid measurement QTL GWAS938118 (human)2e-10fatty acid measurement154240917642409177Human
2289430BMD7_HBone mineral density QTL 7 (human)3.320.0001Bone mineral density151998012945980129Human
407285880GWAS934856_Hlow density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio QTL GWAS934856 (human)2e-14low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)154240917642409177Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS808032_H GCST010244 Triglyceride levels 441,016 European ancestry individuals C 0.98196 2E-31 30.699 rs28364531 0.0877508 triglyceride measurement (EFO:0004530)
 PMID:32203549
GWAS815136_H GCST90092845 Cholesterol to total lipids ratio in large HDL 115,082 European ancestry individuals C 0.982019 2E-9 8.699 rs28364531 0.0879468 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS816249_H GCST90092847 Cholesteryl esters to total lipids ratio in large HDL 115,082 European ancestry individuals C 0.982019 4E-9 8.398 rs28364531 0.0874316 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS831521_H GCST90092875 Concentration of large VLDL particles 115,082 European ancestry individuals C 0.982019 4E-8 7.398 rs28364531 0.0830952 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS831533_H GCST90092876 Phospholipid levels in large VLDL 115,082 European ancestry individuals C 0.982019 1E-8 8 rs28364531 0.0858927 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS837212_H GCST90092861 Free cholesterol to total lipids ratio in large LDL 115,082 European ancestry individuals C 0.982019 5E-21 20.302 rs28364531 0.139858 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS839984_H GCST90092866 Triglyceride levels in large LDL 115,082 European ancestry individuals C 0.982019 3E-12 11.523 rs28364531 0.106833 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS888926_H GCST90092841 Triglyceride levels in IDL 115,082 European ancestry individuals C 0.982019 4E-13 12.398 rs28364531 0.110561 triglyceride measurement (EFO:0004530)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
None Available GCST90092929 Ratio of monounsaturated fatty acids to total fatty acids 115,006 European ancestry individuals C 0.982012 4E-9 8.398 rs28364531 0.0885926 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS904679_H GCST90092927 Triglycerides to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.982019 7E-10 9.155 rs28364531 0.0908844 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS905044_H GCST90092928 Monounsaturated fatty acid levels 115,006 European ancestry individuals C 0.982012 5E-8 7.302 rs28364531 0.0841074 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS905206_H GCST90092914 Triglyceride levels in medium LDL 115,082 European ancestry individuals C 0.982019 7E-13 12.155 rs28364531 0.109522 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS907316_H GCST90092917 Cholesterol to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.982019 1E-10 10 rs28364531 0.0948849 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
None Available GCST90092903 Triglycerides to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.982019 4E-9 8.398 rs28364531 0.0881096 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS917333_H GCST90092829 Triglyceride levels in HDL 115,082 European ancestry individuals C 0.982019 3E-9 8.523 rs28364531 0.0906683 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS926228_H GCST90092902 Triglyceride levels in medium HDL 115,082 European ancestry individuals C 0.982019 6E-9 8.222 rs28364531 0.0889553 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS930392_H GCST90092893 Cholesterol to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.982019 1E-9 9 rs28364531 0.0906085 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092895 Cholesteryl esters to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.982019 1E-9 9 rs28364531 0.0918813 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092901 Phospholipids to total lipids ratio in medium HDL 115,082 European ancestry individuals C 0.982019 1E-8 8 rs28364531 0.0848788 phospholipids:total lipids ratio (EFO:0020946)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS931316_H GCST90092890 Triglyceride levels in LDL 115,082 European ancestry individuals C 0.982019 1E-12 12 rs28364531 0.108591 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS934856_H GCST90092909 Free cholesterol to total lipids ratio in medium LDL 115,082 European ancestry individuals C 0.982019 2E-14 13.699 rs28364531 0.114184 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS936043_H GCST90092919 Cholesteryl esters to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.982019 3E-11 10.523 rs28364531 0.0974643 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS938118_H GCST90092935 Ratio of omega-6 fatty acids to total fatty acids 115,006 European ancestry individuals C 0.982012 2E-10 9.699 rs28364531 0.0950916 fatty acid measurement (EFO:0005110)
 PMID:35213538
GWAS938431_H GCST90092926 Triglyceride levels in medium VLDL 115,082 European ancestry individuals C 0.982019 8E-9 8.097 rs28364531 0.0877275 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS943862_H GCST90092921 Free cholesterol to total lipids ratio in medium VLDL 115,082 European ancestry individuals C 0.982019 2E-8 7.699 rs28364531 0.0840899 very low density lipoprotein cholesterol measurement (EFO:0008317)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
None Available GCST90093044 Free cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.982019 4E-9 8.398 rs28364531 0.0887697 free cholesterol measurement (EFO:0008591)
chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093040 Cholesterol levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.982019 1E-8 8 rs28364531 0.0859907 chylomicron measurement (EFO:0008596)
total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS959464_H GCST90093039 Triglycerides to total lipids ratio in very small VLDL 115,082 European ancestry individuals C 0.982019 8E-18 17.097 rs28364531 0.127306 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS959963_H GCST90093038 Triglyceride levels in very small VLDL 115,082 European ancestry individuals C 0.982019 2E-15 14.699 rs28364531 0.120404 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093048 Phospholipid levels in chylomicrons and extremely large VLDL 115,082 European ancestry individuals C 0.982019 2E-8 7.699 rs28364531 0.084802 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
GWAS960494_H GCST90092973 Free cholesterol to total lipids ratio in small VLDL 115,082 European ancestry individuals C 0.982019 2E-13 12.699 rs28364531 0.109305 very low density lipoprotein cholesterol measurement (EFO:0008317)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
None Available GCST90093015 Triglycerides to total lipids ratio in very large HDL 115,056 European ancestry individuals C 0.982015 2E-9 8.699 rs28364531 0.0881986 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS964971_H GCST90092967 Triglycerides to total lipids ratio in small LDL 115,082 European ancestry individuals C 0.982019 4E-14 13.398 rs28364531 0.113685 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
None Available GCST90092974 Total lipid levels in small VLDL 115,082 European ancestry individuals C 0.982019 4E-8 7.398 rs28364531 0.0846641 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
None Available GCST90093003 Triglyceride levels in VLDL 115,082 European ancestry individuals C 0.982019 4E-9 8.398 rs28364531 0.0883317 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS967332_H GCST90092955 Triglycerides to total lipids ratio in small HDL 115,082 European ancestry individuals C 0.982019 2E-11 10.699 rs28364531 0.0999131 triglycerides:total lipids ratio (EFO:0020947)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS968019_H GCST90092979 Triglycerides to total lipids ratio in small VLDL 115,082 European ancestry individuals C 0.982019 4E-11 10.398 rs28364531 0.0998478 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS968855_H GCST90092954 Triglyceride levels in small HDL 115,082 European ancestry individuals C 0.982019 2E-12 11.699 rs28364531 0.106365 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS968864_H GCST90092977 Phospholipids to total lipids ratio in small VLDL 115,082 European ancestry individuals C 0.982019 3E-13 12.523 rs28364531 0.108439 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
None Available GCST90092975 Concentration of small VLDL particles 115,082 European ancestry individuals C 0.982019 1E-8 8 rs28364531 0.0880737 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093023 Concentration of very large VLDL particles 115,082 European ancestry individuals C 0.982019 2E-8 7.699 rs28364531 0.083838 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS973660_H GCST90179149 Triglyceride levels (MTAG) 361,194 European ancestry individuals T NR 7E-17 16.155 rs28364531 0.078619 triglyceride measurement (EFO:0004530)
 PMID:36376304
GWAS974416_H GCST90092966 Triglyceride levels in small LDL 115,082 European ancestry individuals C 0.982019 1E-11 11 rs28364531 0.102995 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS976929_H GCST90092961 Free cholesterol to total lipids ratio in small LDL 115,082 European ancestry individuals C 0.982019 4E-12 11.398 rs28364531 0.104837 low density lipoprotein cholesterol measurement (EFO:0004611)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
GWAS978581_H GCST90092978 Triglyceride levels in small VLDL 115,082 European ancestry individuals C 0.982019 9E-15 14.046 rs28364531 0.116985 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS978736_H GCST90092992 Total triglycerides levels 115,082 European ancestry individuals C 0.982019 5E-10 9.302 rs28364531 0.0941004 triglyceride measurement (EFO:0004530)
 PMID:35213538
GWAS978802_H GCST90092983 Ratio of triglycerides to phosphoglycerides 115,006 European ancestry individuals C 0.982012 9E-10 9.046 rs28364531 0.0889164 triglyceride measurement (EFO:0004530)
phospholipid measurement (EFO:0004639)
 PMID:35213538
None Available GCST90093026 Triglyceride levels in very large VLDL 115,082 European ancestry individuals C 0.982019 1E-8 8 rs28364531 0.0857637 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS987819_H GCST90093047 Concentration of chylomicrons and extremely large VLDL particles 115,082 European ancestry individuals C 0.982019 3E-8 7.523 rs28364531 0.083013 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
Database Acc Id Source(s)
GWAS Catalog GCST90092921 GWAS Catalog
  GCST90093023 GWAS Catalog
  GCST90093048 GWAS Catalog

RGD Curation Notes
Note Type Note Reference