GWAS908183_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS908183_H (genomic measurement QTL GWAS908183 (human)) Homo sapiens

Symbol: GWAS908183_H
Name: genomic measurement QTL GWAS908183 (human)
RGD ID: 407259207
Trait: genomic measurement
LOD Score: Not Available
P Value: 6.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38615,313,558 - 15,313,559RGD_MAPPER_PIPELINEGRCh38
GRCh37615,313,789 - 15,313,790RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1354253JARID2jumonji and AT-rich interaction domain containing 261524606915522042Human


Peak: (rs794791)
Human AssemblyChrPosition (strand)Source
GRCh38615,313,558 - 15,313,559RGD_MAPPER_PIPELINE


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
407259207GWAS908183_Hgenomic measurement QTL GWAS908183 (human)6e-10genomic measurement61531355815313559Human
2289408BW324_HBody weight QTL 324 (human)3.150.0001Body fat amount6120803913Human
1643418BW282_HBody Weight QTL 282 (human)2.070.001Body weight6119321359Human
1643377BW325_HBody weight QTL 325 (human)2.320.0005Body fat amount6691196032911960Human
1643569GLUCO21_HGlucose level QTL 21 (human)0.021Glucose levelnon-insulin-dependent6691196032911960Human
407254062GWAS903038_Hgenomic measurement QTL GWAS903038 (human)3e-09genomic measurement61531355815313559Human
1298458BW9_HBody weight QTL 9 (human)2.70.0002Body fat amount6691196032911960Human
2289320BW390_HBody weight QTL 390 (human)2.13Body weightBMI6119321359Human
1358854MULTSCL4_HMultiple sclerosis susceptibility QTL 4 (human)Multiple sclerosis susceptibility6691196032911960Human
2289435BMD4_HBone mineral density QTL 4 (human)3.150.0001Bone mineral density6120803913Human

1 to 10 of 13 rows


Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1751986_H GCST90328148 Mosaic loss of chromosome X 806,257 European ancestry females, 77,317 East Asian ancestry females ? NR 3E-9 8.523 rs794791 N/A mosaic loss of chromosome X measurement (EFO:0022842)
 PMID:38867047
GWAS1752096_H GCST90328150 Mosaic loss of chromosome X 91,689 European ancestry female cases, 714,568 European ancestry female controls, 13,597 East Asian ancestry female cases, 63,720 East Asian ancestry female controls ? NR 6E-10 9.222 rs794791 0.0348 mosaic loss of chromosome X measurement (EFO:0022842)
 PMID:38867047
Database
Acc Id
Source(s)
GWAS Catalog GCST90328150 GWAS Catalog

Note Type Note Reference