GWAS852860_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS852860_H (verbal-numerical reasoning measurement QTL GWAS852860 (human)) Homo sapiens

Symbol: GWAS852860_H
Name: verbal-numerical reasoning measurement QTL GWAS852860 (human)
RGD ID: 407203884
Trait: verbal-numerical reasoning measurement
LOD Score: Not Available
P Value: 4.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38120,495,472 - 20,495,473RGD_MAPPER_PIPELINEGRCh38
GRCh37120,821,965 - 20,821,966RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS852860_HHumanverbal-numerical reasoning measurement  IAGPrs12076947405850206 GWAS_CATALOGPMID:32895543
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs12076947)
Human AssemblyChrPosition (strand)Source
GRCh38120,495,472 - 20,495,473RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407203884GWAS852860_Hverbal-numerical reasoning measurement QTL GWAS852860 (human)4e-09verbal-numerical reasoning measurement12049547220495473Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS852860_H GCST90011298 Verbal-numerical reasoning 171,304 British ancestry individuals ? NR 4E-9 8.398 rs12076947 N/A verbal-numerical reasoning measurement (EFO:0008394)
 PMID:32895543
Database Acc Id Source(s)
GWAS Catalog GCST90011298 GWAS Catalog

RGD Curation Notes
Note Type Note Reference