GWAS851833_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS851833_H (abdominal fat cell number QTL GWAS851833 (human)) Homo sapiens

Symbol: GWAS851833_H
Name: abdominal fat cell number QTL GWAS851833 (human)
RGD ID: 407202857
Trait: abdominal fat cell number
LOD Score: Not Available
P Value: 8.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3815,211,427 - 5,211,428RGD_MAPPER_PIPELINEGRCh38
GRCh3715,271,487 - 5,271,488RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS851833_HHumanabdominal fat cell number  IAGPrs148400317405850206 GWAS_CATALOGPMID:35320353
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs148400317)
Human AssemblyChrPosition (strand)Source
GRCh3815,211,427 - 5,211,428RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
407202857GWAS851833_Habdominal fat cell number QTL GWAS851833 (human)0.000008abdominal fat cell number152114275211428Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS851833_H GCST90104785 Abdominal fat cell number 896 individuals ? 0.013 0.000008 5.097 rs148400317 0.127 abdominal fat cell number (EFO:0021534)
 PMID:35320353
Database Acc Id Source(s)
GWAS Catalog GCST90104785 GWAS Catalog

RGD Curation Notes
Note Type Note Reference