GWAS845672_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS845672_H (free cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS845672 (human)) Homo sapiens

Symbol: GWAS845672_H
Name: free cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS845672 (human)
RGD ID: 407196696
Trait: free cholesterol measurement, high density lipoprotein cholesterol measurement
Measurement Type: blood cholesterol level   (CMO:0002280)    
blood high density lipoprotein cholesterol level   (CMO:0000052)    
LOD Score: Not Available
P Value: 8.0E-11
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381558,541,794 - 58,541,795RGD_MAPPER_PIPELINEGRCh38
GRCh371558,833,993 - 58,833,994RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS845672_HHumanblood cholesterol level  IAGPrs6078405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538
GWAS845672_HHumanblood high density lipoprotein cholesterol level  IAGPrs6078405850206Based on the EFO term IDGWAS_CATALOGPMID:35213538

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS845672_HHumanfree cholesterol measurement  IAGPrs6078405850206 GWAS_CATALOGPMID:35213538
GWAS845672_HHumanhigh density lipoprotein cholesterol measurement  IAGPrs6078405850206 GWAS_CATALOGPMID:35213538
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
736877LIPClipase C, hepatic type155843199158569844Human

Position Markers

Peak: (rs6078)
Human AssemblyChrPosition (strand)Source
GRCh381558,541,794 - 58,541,795RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406901889GWAS550865_Htotal cholesterol measurement QTL GWAS550865 (human)0.00001total cholesterol measurementblood total cholesterol level (CMO:0000051)155854179458541795Human
407334214GWAS983190_Hvery low density lipoprotein cholesterol measurement, lipid measurement QTL GWAS983190 (human)5e-14very low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)155854179458541795Human
407242114GWAS891090_Hcholesteryl esters:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS891090 (human)1e-12free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407282819GWAS931795_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS931795 (human)1e-08blood lipid amount (VT:0003949)blood very low density lipoprotein particle diameter (CMO:0002694)155854179458541795Human
407238723GWAS887699_Htriglyceride measurement, intermediate density lipoprotein measurement QTL GWAS887699 (human)1e-18triglyceride measurement, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)155854179458541795Human
407238083GWAS887059_Hphospholipids:total lipids ratio, intermediate density lipoprotein measurement QTL GWAS887059 (human)7e-12phospholipids:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407165704GWAS814680_Hcholesteryl ester measurement, high density lipoprotein cholesterol measurement QTL GWAS814680 (human)2e-08blood lipid amount (VT:0003949)blood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407182985GWAS831961_Hvery low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio QTL GWAS831961 (human)8e-10very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407331722GWAS980698_Hvery low density lipoprotein cholesterol measurement, phospholipid measurement QTL GWAS980698 (human)2e-15very low density lipoprotein cholesterol measurement, phospholipid measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407345685GWAS994661_Hcholesteryl ester measurement, high density lipoprotein cholesterol measurement QTL GWAS994661 (human)5e-11blood lipid amount (VT:0003949)blood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
407333522GWAS982498_Hvery low density lipoprotein cholesterol measurement QTL GWAS982498 (human)8e-13very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407346128GWAS995104_Htriglyceride measurement, high density lipoprotein cholesterol measurement QTL GWAS995104 (human)6e-16triglyceride measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407265886GWAS914862_Hhigh density lipoprotein particle size measurement QTL GWAS914862 (human)3e-13free cholesterol measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407182489GWAS831465_Htriglycerides:total lipids ratio, low density lipoprotein cholesterol measurement QTL GWAS831465 (human)4e-11total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407196696GWAS845672_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS845672 (human)8e-11free cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407346008GWAS994984_Hhigh density lipoprotein cholesterol measurement QTL GWAS994984 (human)5e-15high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407184165GWAS833141_Hvery low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio QTL GWAS833141 (human)2e-09blood lipid amount (VT:0003949)blood chylomicron level (CMO:0000527)155854179458541795Human
407165414GWAS814390_Hhigh density lipoprotein cholesterol measurement QTL GWAS814390 (human)1e-10total cholesterol measurement, very low density lipoprotein cholesterol measurementblood cholesterol level (CMO:0002280)155854179458541795Human
407187808GWAS836784_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS836784 (human)3e-09chylomicron measurement, very low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407344225GWAS993201_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS993201 (human)2e-13lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407191273GWAS840249_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS840249 (human)1e-15triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155854179458541795Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human
407256235GWAS905211_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS905211 (human)3e-08chylomicron measurement, very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407282345GWAS931321_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS931321 (human)1e-11triglyceride measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)155854179458541795Human
407311350GWAS960326_Hchylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS960326 (human)5e-08chylomicron measurement, very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407289586GWAS938562_Hcholesteryl esters:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS938562 (human)3e-12triglyceride measurement, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407197244GWAS846220_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS846220 (human)1e-09free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407199231GWAS848207_Hlipid measurement, high density lipoprotein cholesterol measurement QTL GWAS848207 (human)5e-10lipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407189689GWAS838665_Htriglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement QTL GWAS838665 (human)6e-12triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurementblood very low density lipoprotein cholesterol level (CMO:0000648)155854179458541795Human
407270203GWAS919179_Htotal cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS919179 (human)6e-09total cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407346873GWAS995849_Hphospholipid measurement, high density lipoprotein cholesterol measurement QTL GWAS995849 (human)1e-13phospholipid measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human
407320760GWAS969736_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS969736 (human)5e-26free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)155854179458541795Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS550865_H GCST90134518 Total cholesterol levels 58,701 Korean ancestry individuals A NR 0.00001 5 rs6078 1.0 total cholesterol measurement (EFO:0004574)
 PMID:35884923
GWAS814390_H GCST90092851 Concentration of large HDL particles 115,082 European ancestry individuals G 0.971147 1E-10 10 rs6078 0.0693148 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS814680_H GCST90092846 Cholesteryl ester levels in large HDL 115,082 European ancestry individuals G 0.971147 2E-8 7.699 rs6078 0.0610284 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS831465_H GCST90092867 Triglycerides to total lipids ratio in large LDL 115,082 European ancestry individuals G 0.971147 4E-11 10.398 rs6078 0.0790356 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS831961_H GCST90092871 Cholesteryl esters to total lipids ratio in large VLDL 115,071 European ancestry individuals G 0.971148 8E-10 9.097 rs6078 0.0724965 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesteryl esters:total lipids ratio (EFO:0020944)
 PMID:35213538
GWAS833141_H GCST90092869 Cholesterol to total lipids ratio in large VLDL 115,071 European ancestry individuals G 0.971148 2E-9 8.699 rs6078 0.072777 very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
GWAS836784_H GCST90092852 Phospholipid levels in large HDL 115,082 European ancestry individuals G 0.971147 3E-9 8.523 rs6078 0.0644461 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092865 Phospholipids to total lipids ratio in large LDL 115,082 European ancestry individuals G 0.971147 4E-11 10.398 rs6078 0.081542 low density lipoprotein cholesterol measurement (EFO:0004611)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
GWAS838665_H GCST90092879 Triglycerides to total lipids ratio in large VLDL 115,071 European ancestry individuals G 0.971148 6E-12 11.222 rs6078 0.0844178 triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS840249_H GCST90092866 Triglyceride levels in large LDL 115,082 European ancestry individuals G 0.971147 1E-15 15 rs6078 0.0962735 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS845672_H GCST90092848 Free cholesterol levels in large HDL 115,082 European ancestry individuals G 0.971147 8E-11 10.097 rs6078 0.0701353 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS846220_H GCST90092849 Free cholesterol to total lipids ratio in large HDL 115,082 European ancestry individuals G 0.971147 1E-9 9 rs6078 0.0701511 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS848207_H GCST90092850 Total lipid levels in large HDL 115,082 European ancestry individuals G 0.971147 5E-10 9.302 rs6078 0.0672894 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS887059_H GCST90092840 Phospholipids to total lipids ratio in IDL 115,082 European ancestry individuals G 0.971147 7E-12 11.155 rs6078 0.0849378 phospholipids:total lipids ratio (EFO:0020946)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS887699_H GCST90092841 Triglyceride levels in IDL 115,082 European ancestry individuals G 0.971147 1E-18 18 rs6078 0.105872 triglyceride measurement (EFO:0004530)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS891090_H GCST90092834 Cholesteryl esters to total lipids ratio in IDL 115,082 European ancestry individuals G 0.971147 1E-12 12 rs6078 0.0853535 cholesteryl esters:total lipids ratio (EFO:0020944)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS905211_H GCST90092914 Triglyceride levels in medium LDL 115,082 European ancestry individuals G 0.971147 3E-8 7.523 rs6078 0.0669076 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS914862_H GCST90092828 Average diameter for HDL particles 115,082 European ancestry individuals G 0.971147 3E-13 12.523 rs6078 0.0796654 high density lipoprotein particle size measurement (EFO:0008592)
 PMID:35213538
None Available GCST90092832 Cholesterol to total lipids ratio in IDL 115,082 European ancestry individuals G 0.971147 1E-10 10 rs6078 0.0775383 cholesterol:total lipids ratio (EFO:0020943)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
None Available GCST90092842 Triglycerides to total lipids ratio in IDL 115,082 European ancestry individuals G 0.971147 3E-8 7.523 rs6078 0.065694 triglycerides:total lipids ratio (EFO:0020947)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:35213538
GWAS919179_H GCST90092844 Cholesterol levels in large HDL 115,082 European ancestry individuals G 0.971147 6E-9 8.222 rs6078 0.0632638 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS931321_H GCST90092890 Triglyceride levels in LDL 115,082 European ancestry individuals G 0.971147 1E-11 11 rs6078 0.0818825 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS931795_H GCST90092897 Free cholesterol to total lipids ratio in medium HDL 115,082 European ancestry individuals G 0.971147 1E-8 8 rs6078 0.0626207 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092915 Triglycerides to total lipids ratio in medium LDL 115,082 European ancestry individuals G 0.971147 7E-12 11.155 rs6078 0.0826871 triglycerides:total lipids ratio (EFO:0020947)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:35213538
GWAS938562_H GCST90092947 Cholesteryl esters to total lipids ratio in small HDL 115,082 European ancestry individuals G 0.971147 3E-12 11.523 rs6078 0.0840602 cholesteryl esters:total lipids ratio (EFO:0020944)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90092946 Cholesteryl ester levels in small HDL 115,082 European ancestry individuals G 0.971147 1E-8 8 rs6078 0.0709855 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093045 Free cholesterol to total lipids ratio in chylomicrons and extremely large VLDL 111,638 European ancestry individuals G 0.971255 3E-9 8.523 rs6078 0.0728642 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
free cholesterol:total lipids ratio (EFO:0020945)
 PMID:35213538
None Available GCST90093038 Triglyceride levels in very small VLDL 115,082 European ancestry individuals G 0.971147 3E-12 11.523 rs6078 0.0837267 triglyceride measurement (EFO:0004530)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS960326_H GCST90093049 Phospholipids to total lipids ratio in chylomicrons and extremely large VLDL 111,638 European ancestry individuals G 0.971255 5E-8 7.302 rs6078 0.0675251 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:35213538
None Available GCST90093002 Average diameter for VLDL particles 115,082 European ancestry individuals G 0.971147 1E-8 8 rs6078 0.0660494 very low density lipoprotein particle size measurement (EFO:0008594)
 PMID:35213538
None Available GCST90093004 Cholesterol levels in very large HDL 115,082 European ancestry individuals G 0.971147 4E-11 10.398 rs6078 0.0736829 total cholesterol measurement (EFO:0004574)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS969736_H GCST90092949 Free cholesterol to total lipids ratio in small HDL 115,082 European ancestry individuals G 0.971147 5E-26 25.302 rs6078 0.12304 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS980698_H GCST90093036 Phospholipid levels in very small VLDL 115,082 European ancestry individuals G 0.971147 2E-15 14.699 rs6078 0.0958288 very low density lipoprotein cholesterol measurement (EFO:0008317)
phospholipid measurement (EFO:0004639)
 PMID:35213538
None Available GCST90093032 Free cholesterol levels in very small VLDL 115,082 European ancestry individuals G 0.971147 3E-13 12.523 rs6078 0.0880168 free cholesterol measurement (EFO:0008591)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093028 Cholesterol levels in very small VLDL 115,082 European ancestry individuals G 0.971147 1E-10 10 rs6078 0.0772774 total cholesterol measurement (EFO:0004574)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093030 Cholesteryl ester levels in very small VLDL 115,082 European ancestry individuals G 0.971147 2E-9 8.699 rs6078 0.0715996 cholesteryl ester measurement (EFO:0010351)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS982498_H GCST90093035 Concentration of very small VLDL particles 115,082 European ancestry individuals G 0.971147 8E-13 12.097 rs6078 0.086861 very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
GWAS983190_H GCST90093034 Total lipid levels in very small VLDL 115,082 European ancestry individuals G 0.971147 5E-14 13.302 rs6078 0.0907964 very low density lipoprotein cholesterol measurement (EFO:0008317)
lipid measurement (EFO:0004529)
 PMID:35213538
None Available GCST90093051 Triglycerides to total lipids ratio in chylomicrons and extremely large VLDL 111,638 European ancestry individuals G 0.971255 2E-9 8.699 rs6078 0.075352 chylomicron measurement (EFO:0008596)
triglycerides:total lipids ratio (EFO:0020947)
very low density lipoprotein cholesterol measurement (EFO:0008317)
 PMID:35213538
None Available GCST90093041 Cholesterol to total lipids ratio in chylomicrons and extremely large VLDL 111,638 European ancestry individuals G 0.971255 3E-8 7.523 rs6078 0.0687333 chylomicron measurement (EFO:0008596)
very low density lipoprotein cholesterol measurement (EFO:0008317)
cholesterol:total lipids ratio (EFO:0020943)
 PMID:35213538
None Available GCST90093005 Cholesterol to total lipids ratio in very large HDL 115,056 European ancestry individuals G 0.971149 2E-15 14.699 rs6078 0.0928109 cholesterol:total lipids ratio (EFO:0020943)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093008 Free cholesterol levels in very large HDL 115,082 European ancestry individuals G 0.971147 1E-10 10 rs6078 0.0744357 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS993201_H GCST90093010 Total lipid levels in very large HDL 115,082 European ancestry individuals G 0.971147 2E-13 12.699 rs6078 0.0814449 lipid measurement (EFO:0004529)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093013 Phospholipids to total lipids ratio in very large HDL 115,056 European ancestry individuals G 0.971149 7E-12 11.155 rs6078 0.0775473 phospholipids:total lipids ratio (EFO:0020946)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS994661_H GCST90093006 Cholesteryl ester levels in very large HDL 115,082 European ancestry individuals G 0.971147 5E-11 10.302 rs6078 0.0727122 cholesteryl ester measurement (EFO:0010351)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS994984_H GCST90093011 Concentration of very large HDL particles 115,082 European ancestry individuals G 0.971147 5E-15 14.302 rs6078 0.0867687 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS995104_H GCST90093014 Triglyceride levels in very large HDL 115,082 European ancestry individuals G 0.971147 6E-16 15.222 rs6078 0.0969351 triglyceride measurement (EFO:0004530)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS995849_H GCST90093012 Phospholipid levels in very large HDL 115,082 European ancestry individuals G 0.971147 1E-13 13 rs6078 0.08224 phospholipid measurement (EFO:0004639)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90093009 Free cholesterol to total lipids ratio in very large HDL 115,056 European ancestry individuals G 0.971149 1E-12 12 rs6078 0.0772177 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
Database Acc Id Source(s)
GWAS Catalog GCST90092848 GWAS Catalog

RGD Curation Notes
Note Type Note Reference