GWAS804026_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS804026_H (S-warfarin to R-warfarin ratio measurement QTL GWAS804026 (human)) Homo sapiens

Symbol: GWAS804026_H
Name: S-warfarin to R-warfarin ratio measurement QTL GWAS804026 (human)
RGD ID: 407155050
Trait: S-warfarin to R-warfarin ratio measurement
LOD Score: Not Available
P Value: 8.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38379,055,059 - 79,055,060RGD_MAPPER_PIPELINEGRCh38
GRCh37379,104,209 - 79,104,210RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS804026_HHumanS-warfarin to R-warfarin ratio measurement  IAGPrs7625358405850206 GWAS_CATALOGPMID:36210801
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
735617ROBO1roundabout guidance receptor 137859723979767998Human

Position Markers

Peak: (rs7625358)
Human AssemblyChrPosition (strand)Source
GRCh38379,055,059 - 79,055,060RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407155050GWAS804026_HS-warfarin to R-warfarin ratio measurement QTL GWAS804026 (human)0.000008S-warfarin to R-warfarin ratio measurement37905505979055060Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS804026_H GCST90129570 S-warfarin to R-warfarin ratio 524 Sub-Saharan African ancestry individuals ? NR 0.000008 5.097 rs7625358 0.28131 S-warfarin to R-warfarin ratio measurement (EFO:0803331)
 PMID:36210801
Database Acc Id Source(s)
GWAS Catalog GCST90129570 GWAS Catalog

RGD Curation Notes
Note Type Note Reference