GWAS777075_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS777075_H (esterified cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS777075 (human)) Homo sapiens

Symbol: GWAS777075_H
Name: esterified cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS777075 (human)
RGD ID: 407128099
Trait: esterified cholesterol measurement, low density lipoprotein cholesterol measurement
Measurement Type: blood low density lipoprotein cholesterol level   (CMO:0000053)    
LOD Score: Not Available
P Value: 2E-138
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38221,065,354 - 21,065,355RGD_MAPPER_PIPELINEGRCh38
GRCh37221,288,226 - 21,288,227RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS777075_HHumanblood low density lipoprotein cholesterol level  IAGPrs563290405850206Based on the EFO term IDGWAS_CATALOGPMID:38448586

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS777075_HHumanesterified cholesterol measurement  IAGPrs563290405850206 GWAS_CATALOGPMID:38448586
GWAS777075_HHumanlow density lipoprotein cholesterol measurement  IAGPrs563290405850206 GWAS_CATALOGPMID:38448586
Experimental Data Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs563290)
Human AssemblyChrPosition (strand)Source
GRCh38221,065,354 - 21,065,355RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407278788GWAS927764_Htotal cholesterol measurement QTL GWAS927764 (human)4e-14total cholesterol measurementblood total cholesterol level (CMO:0000051)22106535421065355Human
407278789GWAS927765_Htotal cholesterol measurement QTL GWAS927765 (human)3e-130total cholesterol measurementblood total cholesterol level (CMO:0000051)22106535421065355Human
407161024GWAS810000_Hlow density lipoprotein cholesterol measurement QTL GWAS810000 (human)1e-15low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407161025GWAS810001_Hlow density lipoprotein cholesterol measurement QTL GWAS810001 (human)2e-142low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407278787GWAS927763_Htotal cholesterol measurement QTL GWAS927763 (human)8e-117total cholesterol measurementblood total cholesterol level (CMO:0000051)22106535421065355Human
407080389GWAS729365_Hlow density lipoprotein cholesterol measurement, lipid measurement QTL GWAS729365 (human)1e-140low density lipoprotein cholesterol measurement, lipid measurementblood lipid measurement (CMO:0000050)22106535421065355Human
407325248GWAS974224_Hhematocrit QTL GWAS974224 (human)8e-09hematocrithematocrit (CMO:0000037)22106535421065355Human
407077706GWAS726682_Homega-3 polyunsaturated fatty acid measurement QTL GWAS726682 (human)1e-36omega-3 polyunsaturated fatty acid measurement22106535421065355Human
407086537GWAS735513_Htotal cholesterol in large LDL QTL GWAS735513 (human)6e-141total cholesterol in large LDL22106535421065355Human
407120458GWAS769434_Hphospholipids in large LDL measurement QTL GWAS769434 (human)1e-135phospholipids in large LDL measurementblood low density lipoprotein phospholipid level (CMO:0001568)22106535421065355Human
407086290GWAS735266_Hcholesterol esters in large LDL measurement QTL GWAS735266 (human)8e-139cholesterol esters in large LDL measurement22106535421065355Human
407087442GWAS736418_Htotal lipids in IDL QTL GWAS736418 (human)2e-145total lipids in IDL22106535421065355Human
407095890GWAS744866_Hcholesterol esters in medium LDL measurement QTL GWAS744866 (human)4e-138cholesterol esters in medium LDL measurement22106535421065355Human
407087186GWAS736162_Htriglycerides in IDL measurement QTL GWAS736162 (human)8e-105triglycerides in IDL measurementblood lipoprotein triglyceride level (CMO:0002685)22106535421065355Human
407091793GWAS740769_Hfree cholesterol in large LDL measurement QTL GWAS740769 (human)1e-145free cholesterol in large LDL measurement22106535421065355Human
407142609GWAS791585_Htriglyceride measurement QTL GWAS791585 (human)0.0000002triglyceride measurementblood triglyceride level (CMO:0000118)22106535421065355Human
407344594GWAS993570_Hhigh density lipoprotein cholesterol measurement QTL GWAS993570 (human)1e-33high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)22106535421065355Human
407126109GWAS775085_Hfree cholesterol in small LDL measurement QTL GWAS775085 (human)1e-111free cholesterol in small LDL measurement 22106535421065355Human
407273308GWAS922284_Hhemoglobin measurement QTL GWAS922284 (human)2e-12hemoglobin measurementhemoglobin measurement (CMO:0000508)22106535421065355Human
407068888GWAS717864_Htotal cholesterol in IDL QTL GWAS717864 (human)5e-133total cholesterol in IDL22106535421065355Human
407296100GWAS945076_Htotal cholesterol measurement QTL GWAS945076 (human)4e-24total cholesterol measurementblood total cholesterol level (CMO:0000051)22106535421065355Human
407125351GWAS774327_Hlow density lipoprotein cholesterol measurement QTL GWAS774327 (human)1e-134low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407118817GWAS767793_Hintermediate density lipoprotein measurement QTL GWAS767793 (human)1e-146intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)22106535421065355Human
407130095GWAS779071_Hlow density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS779071 (human)9e-131low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407086446GWAS735422_Hlow density lipoprotein cholesterol measurement QTL GWAS735422 (human)4e-142low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407107955GWAS756931_Hlow density lipoprotein cholesterol measurement QTL GWAS756931 (human)3e-147low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407093882GWAS742858_Htotal cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS742858 (human)9e-140total cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407143943GWAS792919_Hsphingomyelin measurement QTL GWAS792919 (human)4e-66sphingomyelin measurement22106535421065355Human
407127169GWAS776145_Htotal cholesterol in small LDL QTL GWAS776145 (human)5e-136total cholesterol in small LDL22106535421065355Human
407104262GWAS753238_Htotal lipids in large LDL QTL GWAS753238 (human)3e-146total lipids in large LDL22106535421065355Human
407121932GWAS770908_Htotal lipids in small LDL QTL GWAS770908 (human)6e-134total lipids in small LDL22106535421065355Human
407075467GWAS724443_Hesterified cholesterol measurement, intermediate density lipoprotein measurement QTL GWAS724443 (human)2e-123esterified cholesterol measurement, intermediate density lipoprotein measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)22106535421065355Human
407118729GWAS767705_Hlow density lipoprotein cholesterol measurement, phospholipids:total lipids ratio QTL GWAS767705 (human)7e-153low density lipoprotein cholesterol measurement, phospholipids:total lipids ratioblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407092108GWAS741084_Hfree cholesterol in medium LDL measurement QTL GWAS741084 (human)4e-128free cholesterol in medium LDL measurement 22106535421065355Human
407081619GWAS730595_Hfree cholesterol in IDL measurement QTL GWAS730595 (human)3e-151free cholesterol in IDL measurementblood intermediate density lipoprotein cholesterol level (CMO:0001562)22106535421065355Human
407057297GWAS706273_Hesterified cholesterol measurement QTL GWAS706273 (human)3e-110esterified cholesterol measurement22106535421065355Human
407320211GWAS969187_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS969187 (human)5e-109free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)22106535421065355Human
407165715GWAS814691_Hfree cholesterol:total lipids ratio, high density lipoprotein cholesterol measurement QTL GWAS814691 (human)3e-78free cholesterol:total lipids ratio, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)22106535421065355Human
407150104GWAS799080_Hlow density lipoprotein triglyceride measurement QTL GWAS799080 (human)1e-08low density lipoprotein triglyceride measurementblood low density lipoprotein triglyceride level (CMO:0002687)22106535421065355Human
407127192GWAS776168_Hphospholipids in small LDL measurement QTL GWAS776168 (human)7e-100phospholipids in small LDL measurement 22106535421065355Human
407273754GWAS922730_Hhematocrit QTL GWAS922730 (human)5e-11hematocrithematocrit (CMO:0000037)22106535421065355Human
407128099GWAS777075_Hesterified cholesterol measurement, low density lipoprotein cholesterol measurement QTL GWAS777075 (human)2e-138esterified cholesterol measurement, low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407086763GWAS735739_Hphospholipids in medium LDL measurement QTL GWAS735739 (human)2e-118phospholipids in medium LDL measurementblood low density lipoprotein phospholipid level (CMO:0001568)22106535421065355Human
407122605GWAS771581_Htotal cholesterol in medium LDL QTL GWAS771581 (human)7e-138total cholesterol in medium LDL22106535421065355Human
407271213GWAS920189_Hhemoglobin measurement QTL GWAS920189 (human)3e-11hemoglobin measurementhemoglobin measurement (CMO:0000508)22106535421065355Human
407345333GWAS994309_Hfree cholesterol measurement, high density lipoprotein cholesterol measurement QTL GWAS994309 (human)8e-30free cholesterol measurement, high density lipoprotein cholesterol measurementblood high density lipoprotein cholesterol level (CMO:0000052)22106535421065355Human
407295793GWAS944769_Hlow density lipoprotein cholesterol measurement QTL GWAS944769 (human)1e-29low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407161023GWAS809999_Hlow density lipoprotein cholesterol measurement QTL GWAS809999 (human)1e-127low density lipoprotein cholesterol measurementblood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human
407090879GWAS739855_Htriglyceride measurement, low density lipoprotein cholesterol measurement QTL GWAS739855 (human)1e-107triglycerides in medium LDL measurement blood low density lipoprotein cholesterol level (CMO:0000053)22106535421065355Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS706273_H GCST90301957 Esterified cholesterol levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 3E-110 109.523 rs563290 0.1144 esterified cholesterol measurement (EFO:0008589)
 PMID:38448586
GWAS717864_H GCST90301975 Total Cholesterol in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 5E-133 132.302 rs563290 0.1254 total cholesterol in IDL (EFO:0022184)
 PMID:38448586
GWAS724443_H GCST90301977 Cholesterol esters in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 2E-123 122.699 rs563290 0.1208 esterified cholesterol measurement (EFO:0008589)
intermediate density lipoprotein measurement (EFO:0008595)
 PMID:38448586
GWAS726682_H GCST90301959 Omega-3 fatty acids levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-36 36 rs563290 0.0651 omega-3 polyunsaturated fatty acid measurement (EFO:0010119)
 PMID:38448586
GWAS729365_H GCST90302049 Total lipid levels in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-140 140 rs563290 0.1296 low density lipoprotein cholesterol measurement (EFO:0004611)
lipid measurement (EFO:0004529)
 PMID:38448586
GWAS730595_H GCST90301979 Free cholesterol in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 3E-151 150.523 rs563290 0.134 free cholesterol in IDL measurement (EFO:0022181)
 PMID:38448586
GWAS735266_H GCST90302009 Cholesterol esters in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 8E-139 138.097 rs563290 0.1287 cholesterol esters in large LDL measurement (EFO:0022165)
 PMID:38448586
GWAS735422_H GCST90302050 Concentration of medium LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 4E-142 141.398 rs563290 0.1303 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS735513_H GCST90302007 Total cholesterol in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 6E-141 140.222 rs563290 0.1296 total cholesterol in large LDL (EFO:0022167)
 PMID:38448586
GWAS735739_H GCST90302051 Phospholipids in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 2E-118 117.699 rs563290 0.1188 phospholipids in medium LDL measurement (EFO:0022183)
 PMID:38448586
GWAS736162_H GCST90301985 Triglycerides in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 8E-105 104.097 rs563290 0.1115 triglycerides in IDL measurement (EFO:0022149)
 PMID:38448586
GWAS736418_H GCST90301981 Total lipids in IDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 2E-145 144.699 rs563290 0.1313 total lipids in IDL (EFO:0022161)
 PMID:38448586
GWAS739855_H GCST90301993 Triglyceride levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-107 107 rs563290 0.1133 triglyceride measurement (EFO:0004530)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS740769_H GCST90302011 Free cholesterol in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-145 145 rs563290 0.1316 free cholesterol in large LDL measurement (EFO:0022176)
 PMID:38448586
GWAS741084_H GCST90302047 Free cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 4E-128 127.398 rs563290 0.1233 free cholesterol in medium LDL measurement (EFO:0022268)
 PMID:38448586
GWAS742858_H GCST90301991 Total cholesterol levels in LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 9E-140 139.046 rs563290 0.1292 total cholesterol measurement (EFO:0004574)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS744866_H GCST90302045 Cholesterol esters in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 4E-138 137.398 rs563290 0.1285 cholesterol esters in medium LDL measurement (EFO:0022186)
 PMID:38448586
GWAS753238_H GCST90302013 Total lipids in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 3E-146 145.523 rs563290 0.132 total lipids in large LDL (EFO:0022163)
 PMID:38448586
GWAS756931_H GCST90302014 Concentration of large LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 3E-147 146.523 rs563290 0.1325 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS767705_H GCST90302016 Phospholipids to total lipids ratio in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8174 7E-153 152.155 rs563290 0.138 low density lipoprotein cholesterol measurement (EFO:0004611)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:38448586
GWAS767793_H GCST90301982 Concentration of IDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 1E-146 146 rs563290 0.1319 intermediate density lipoprotein measurement (EFO:0008595)
 PMID:38448586
GWAS769434_H GCST90302015 Phospholipids in large LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-135 135 rs563290 0.1272 phospholipids in large LDL measurement (EFO:0022174)
 PMID:38448586
GWAS770908_H GCST90302097 Total lipids in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 6E-134 133.222 rs563290 0.1263 total lipids in small LDL (EFO:0022168)
 PMID:38448586
GWAS771581_H GCST90302043 Total cholesterol in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 7E-138 137.155 rs563290 0.1283 total cholesterol in medium LDL (EFO:0022185)
 PMID:38448586
GWAS774327_H GCST90302098 Concentration of small LDL particles 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-134 134 rs563290 0.1267 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS775085_H GCST90302095 Free cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8178 1E-111 111 rs563290 0.1147 free cholesterol in small LDL measurement (EFO:0022271)
 PMID:38448586
GWAS776145_H GCST90302091 Total Cholesterol in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 5E-136 135.302 rs563290 0.1274 total cholesterol in small LDL (EFO:0022179)
 PMID:38448586
GWAS776168_H GCST90302099 Phospholipids in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 7E-100 99.155 rs563290 0.1089 phospholipids in small LDL measurement (EFO:0022297)
 PMID:38448586
GWAS777075_H GCST90302093 Cholesterol esters in small LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 2E-138 137.699 rs563290 0.1286 esterified cholesterol measurement (EFO:0008589)
low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:38448586
GWAS779071_H GCST90302052 Phospholipids to total lipids ratio in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8179 9E-131 130.046 rs563290 0.1269 low density lipoprotein cholesterol measurement (EFO:0004611)
phospholipids:total lipids ratio (EFO:0020946)
 PMID:38448586
None Available GCST90302053 Triglycerides in medium LDL 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 120,241 European ancestry individuals A 0.8177 1E-107 107 rs563290 0.1132 triglycerides in medium LDL measurement (EFO:0022322)
 PMID:38448586
GWAS791585_H GCST007142 Triglycerides 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G NR 2E-7 6.699 rs563290 0.025 triglyceride measurement (EFO:0004530)
 PMID:29507422
GWAS792919_H GCST90302103 Sphingomyelins levels 4,435 East Asian ancestry individuals, 11,340 South Asian ancestry individuals, 110,896 European ancestry individuals A 0.8175 4E-66 65.398 rs563290 0.0902 sphingomyelin measurement (EFO:0010118)
 PMID:38448586
GWAS809999_H GCST007141 Low density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G 0.191 1E-127 127 rs563290 0.143 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:29507422
GWAS810000_H GCST007141 Low density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G 0.178 1E-15 15 rs563290 0.156 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:29507422
GWAS810001_H GCST007141 Low density lipoprotein cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G NR 2E-142 141.699 rs563290 0.141 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:29507422
GWAS814691_H GCST90092849 Free cholesterol to total lipids ratio in large HDL 115,082 European ancestry individuals G 0.180537 3E-78 77.523 rs563290 0.0932491 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS920189_H GCST90002314 Hemoglobin concentration 746,431 African American or Afro-Caribbean, African ancestry, European ancestry, East Asian ancestry, Hispanic or Latin American and South Asian ancestry individuals A 0.845276 3E-11 10.523 rs563290 N/A hemoglobin measurement (EFO:0004509)
 PMID:32888493
GWAS922284_H GCST90002310 Hemoglobin concentration 563,946 European ancestry individuals A 0.817876 2E-12 11.699 rs563290 0.016813 hemoglobin measurement (EFO:0004509)
 PMID:32888493
GWAS922730_H GCST90002304 Hematocrit 562,259 European ancestry individuals A 0.81772 5E-11 10.302 rs563290 0.015715 hematocrit (EFO:0004348)
 PMID:32888493
GWAS927763_H GCST007143 Total cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G 0.191 8E-117 116.097 rs563290 0.133 total cholesterol measurement (EFO:0004574)
 PMID:29507422
GWAS927764_H GCST007143 Total cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G 0.178 4E-14 13.398 rs563290 0.147 total cholesterol measurement (EFO:0004574)
 PMID:29507422
GWAS927765_H GCST007143 Total cholesterol levels 76,627 European ancestry individuals, 7,795 Hispanic individuals, 6,855 East Asian ancestry individuals, 2,958 African American individuals, 439 South Asian ancestry individuals G NR 3E-130 129.523 rs563290 0.131 total cholesterol measurement (EFO:0004574)
 PMID:29507422
GWAS944769_H GCST008037 Low density lipoprotein cholesterol levels 9,720 African American individuals, 17,373 Hispanic/Latino individuals, 2,316 Asian ancestry individuals, 1,900 Native Hawaiian ancestry individuals, 591 Native American ancestry individuals, 321 individuals ? NR 1E-29 29 rs563290 4.33531 low density lipoprotein cholesterol measurement (EFO:0004611)
 PMID:31217584
GWAS945076_H GCST008045 Total cholesterol levels 10,137 African American individuals, 17,802 Hispanic/Latino individuals, 2,387 Asian ancestry individuals, 1,915 Native Hawaiian ancestry individuals, 604 Native American ancestry individuals, 340 individuals ? NR 4E-24 23.398 rs563290 4.317919 total cholesterol measurement (EFO:0004574)
 PMID:31217584
GWAS969187_H GCST90092949 Free cholesterol to total lipids ratio in small HDL 115,082 European ancestry individuals G 0.180537 5E-109 108.302 rs563290 0.112522 free cholesterol:total lipids ratio (EFO:0020945)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS974224_H GCST90018960 Hematocrit 350,475 European ancestry individuals, 153,015 East Asian ancestry individuals A NR 8E-9 8.097 rs563290 0.0146 hematocrit (EFO:0004348)
 PMID:34594039
GWAS993570_H GCST90093011 Concentration of very large HDL particles 115,082 European ancestry individuals G 0.180537 1E-33 33 rs563290 0.0582859 high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
GWAS994309_H GCST90093008 Free cholesterol levels in very large HDL 115,082 European ancestry individuals G 0.180537 8E-30 29.097 rs563290 0.0566223 free cholesterol measurement (EFO:0008591)
high density lipoprotein cholesterol measurement (EFO:0004612)
 PMID:35213538
None Available GCST90091714 Postprandial triglycerides levels in medium LDL null A 0.832387854 1E-8 8 rs563290 0.163636 low density lipoprotein triglyceride measurement (EFO:0009946)
 PMID:34610981
Database Acc Id Source(s)
GWAS Catalog GCST90302093 GWAS Catalog

RGD Curation Notes
Note Type Note Reference