GWAS760930_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS760930_H (waist-hip ratio QTL GWAS760930 (human)) Homo sapiens

Symbol: GWAS760930_H
Name: waist-hip ratio QTL GWAS760930 (human)
RGD ID: 407111954
Trait: waist-hip ratio
Measurement Type: waist to hip ratio (WHR)   (CMO:0000020)    
LOD Score: Not Available
P Value: 8.0E-8
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38121,312,674 - 21,312,675RGD_MAPPER_PIPELINEGRCh38
GRCh37121,639,167 - 21,639,168RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS760930_HHumanwaist to hip ratio (WHR)  IAGPrs213010405850206Based on the EFO term IDGWAS_CATALOGPMID:30595370

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS760930_HHumanwaist-hip ratio  IAGPrs213010405850206 GWAS_CATALOGPMID:30595370
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
731823ECE1endothelin converting enzyme 112121725021345504Human

Position Markers

Peak: (rs213010)
Human AssemblyChrPosition (strand)Source
GRCh38121,312,674 - 21,312,675RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407111954GWAS760930_Hwaist-hip ratio QTL GWAS760930 (human)8e-08waist-hip ratiowaist to hip ratio (WHR) (CMO:0000020)12131267421312675Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS760930_H GCST007067 Waist-hip ratio approximately 458,000 European ancestry individuals ? NR 8E-8 7.097 rs213010 N/A waist-hip ratio (EFO:0004343)
 PMID:30595370
Database Acc Id Source(s)
GWAS Catalog GCST007067 GWAS Catalog

RGD Curation Notes
Note Type Note Reference