GWAS723510_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS723510_H (bipolar I disorder QTL GWAS723510 (human)) Homo sapiens

Symbol: GWAS723510_H
Name: bipolar I disorder QTL GWAS723510 (human)
RGD ID: 407074534
Trait: bipolar I disorder
LOD Score: Not Available
P Value: 2.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386166,583,503 - 166,583,504RGD_MAPPER_PIPELINEGRCh38
GRCh376166,996,991 - 166,996,992RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1348784RPS6KA2ribosomal protein S6 kinase A26166409364166862773Human
1604467RAMACLRNA guanine-7 methyltransferase activating subunit like6166583009166586678Human

Position Markers

Peak: (rs960145)
Human AssemblyChrPosition (strand)Source
GRCh386166,583,503 - 166,583,504RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1643404BMD3_HBone mineral density QTL 3 (human)2.420.0005Bone mineral density6157563614170805979Human
407074534GWAS723510_Hbipolar I disorder QTL GWAS723510 (human)0.0000002bipolar I disorder6166583503166583504Human
1643367BW323_HBody weight QTL 323 (human)2.420.0005Body fat amount6157563614170805979Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS723510_H GCST008115 Bipolar I disorder 14,879 European ancestry cases, 31,358 European ancestry controls A 0.47 2E-7 6.699 rs960145 1.08166 bipolar I disorder (EFO:0009963)
 PMID:31043756
Database Acc Id Source(s)
GWAS Catalog GCST008115 GWAS Catalog

RGD Curation Notes
Note Type Note Reference