GWAS701523_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS701523_H (exercise test QTL GWAS701523 (human)) Homo sapiens

Symbol: GWAS701523_H
Name: exercise test QTL GWAS701523 (human)
RGD ID: 407052547
Trait: exercise test
LOD Score: Not Available
P Value: 2.0E-9
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381557,786,063 - 57,786,064RGD_MAPPER_PIPELINEGRCh38
GRCh371558,078,261 - 58,078,262RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS701523_HHumanexercise test  IAGPrs17240160405850206 GWAS_CATALOGPMID:32572135
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs17240160)
Human AssemblyChrPosition (strand)Source
GRCh381557,786,063 - 57,786,064RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407052547GWAS701523_Hexercise test QTL GWAS701523 (human)2e-09exercise test155778606357786064Human
2299958PRSTS330_HProstate tumor susceptibility QTL 330 (human)1.020.0151Prostate tumor susceptibility153479023060790230Human
1559354LDLPS4_HLow density lipoprotein particle size QTL 4 (human)2.20.019LDL particle size153479023060790230Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS701523_H GCST010573 Cardiorespiratory fitness (800m run time) 762 Han Chinese ancestry individuals A NR 2E-9 8.699 rs17240160 26.1 exercise test (EFO:0004328)
 PMID:32572135
Database Acc Id Source(s)
GWAS Catalog GCST010573 GWAS Catalog

RGD Curation Notes
Note Type Note Reference