GWAS669602_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS669602_H (educational attainment QTL GWAS669602 (human)) Homo sapiens

Symbol: GWAS669602_H
Name: educational attainment QTL GWAS669602 (human)
RGD ID: 407020626
Trait: educational attainment
LOD Score: Not Available
P Value: 8.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh384172,992,880 - 172,992,881RGD_MAPPER_PIPELINEGRCh38
GRCh374173,914,031 - 173,914,032RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS669602_HHumaneducational attainment  IAGPrs28890012405850206 GWAS_CATALOGPMID:35361970
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2301498GALNTL6polypeptide N-acetylgalactosaminyltransferase like 64171813404173041559Human

Position Markers

Peak: (rs28890012)
Human AssemblyChrPosition (strand)Source
GRCh384172,992,880 - 172,992,881RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407020626GWAS669602_Heducational attainment QTL GWAS669602 (human)8e-10educational attainment4172992880172992881Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS669602_H GCST90105038 Educational attainment 3,037,499 European ancestry individuals A 0.8207 8E-10 9.097 rs28890012 0.00866891 educational attainment (EFO:0011015)
 PMID:35361970
Database Acc Id Source(s)
GWAS Catalog GCST90105038 GWAS Catalog

RGD Curation Notes
Note Type Note Reference