GWAS649713_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS649713_H (diastolic blood pressure QTL GWAS649713 (human)) Homo sapiens

Symbol: GWAS649713_H
Name: diastolic blood pressure QTL GWAS649713 (human)
RGD ID: 407000737
Trait: diastolic blood pressure
Measurement Type: diastolic blood pressure   (CMO:0000005)    
LOD Score: Not Available
P Value: 1.0E-7
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382207,544,615 - 207,544,616RGD_MAPPER_PIPELINEGRCh38
GRCh372208,409,339 - 208,409,340RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




Clinical Measurement
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS649713_HHumandiastolic blood pressure  IAGPrs2360970405850206Based on the EFO term IDGWAS_CATALOGPMID:27841878

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
GWAS649713_HHumandiastolic blood pressure  IAGPrs2360970405850206 GWAS_CATALOGPMID:27841878

#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
730886CREB1cAMP responsive element binding protein 12207529962207605988Human


Peak: (rs2360970)
Human AssemblyChrPosition (strand)Source
GRCh382207,544,615 - 207,544,616RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2293458PRSTS291_HProstate tumor susceptibility QTL 291 (human)0.012Prostate tumor susceptibility2200715236226715236Human
407000737GWAS649713_Hdiastolic blood pressure QTL GWAS649713 (human)0.0000001diastolic blood pressurediastolic blood pressure (CMO:0000005)2207544615207544616Human
1643053BW117_HBody Weight QTL 117 (human)2.40.00044Body weight2200715236226715236Human
407002636GWAS651612_Hsystolic blood pressure QTL GWAS651612 (human)2e-08systolic blood pressuresystolic blood pressure (CMO:0000004)2207544615207544616Human
1643254BW125_HBody Weight QTL 125 (human)1.450.005Body weightbody mass index2200715236226715236Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS649713_H GCST007094 Diastolic blood pressure 295,529 European ancestry individuals, 8,231 Latino individuals, 3,058 African American individuals, 2,029 African British individuals, 7,701 East Asian ancestry individuals, 2,735 South Asian ancestry individuals, 1,979 mixed and unknown ancestry individuals G NR 1E-7 7 rs2360970 0.124 diastolic blood pressure (EFO:0006336)
 PMID:27841878
GWAS651612_H GCST007099 Systolic blood pressure 295,529 European ancestry individuals, 8,231 Latino individuals, 3,058 African American individuals, 2,029 African British individuals, 7,701 East Asian ancestry individuals, 2,735 South Asian ancestry individuals, 1,979 mixed and unknown ancestry individuals G NR 2E-8 7.699 rs2360970 0.215 systolic blood pressure (EFO:0006335)
 PMID:27841878
Database
Acc Id
Source(s)
GWAS Catalog GCST007094 GWAS Catalog

Note Type Note Reference