GWAS635524_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS635524_H (type 2 diabetes mellitus QTL GWAS635524 (human)) Homo sapiens

Symbol: GWAS635524_H
Name: type 2 diabetes mellitus QTL GWAS635524 (human)
RGD ID: 406986548
Trait: type 2 diabetes mellitus
LOD Score: Not Available
P Value: 4.0E-18
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38577,116,920 - 77,116,921RGD_MAPPER_PIPELINEGRCh38
GRCh37576,412,745 - 76,412,746RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model




#
Reference Title
Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
6770267ZBED3-AS1ZBED3 antisense RNA 157708671577149301Human
1348334PDE8Bphosphodiesterase 8B57708671577428256Human


Peak: (rs4437352)
Human AssemblyChrPosition (strand)Source
GRCh38577,116,920 - 77,116,921RGD_MAPPER_PIPELINE


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
597261496GWAS1357570_Htype 2 diabetes mellitus QTL GWAS1357570 (human)4e-18type 2 diabetes mellitus57711692077116921Human
406986548GWAS635524_Htype 2 diabetes mellitus QTL GWAS635524 (human)4e-18type 2 diabetes mellitus57711692077116921Human
596962843GWAS1082362_Htype 2 diabetes mellitus QTL GWAS1082362 (human)4e-18type 2 diabetes mellitus57711692077116921Human



Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL
GWAS Catalog Study
Disease Trait
Study Size
Risk Allele
Risk Allele Frequency
P Value
P Value MLOG
Peak Marker
Reported Odds Ratio or Beta-coefficient
Ontology Accession
PubMed
GWAS1357570_H GCST90134620 Type 2 diabetes 418 Sindhi ancestry cases from endogamous families, 984 Sindhi ancestry controls from endogamous families ? NR 4E-18 17.398 rs4437352 N/A PMID:35893037
Database
Acc Id
Source(s)
GWAS Catalog GCST90134620 GWAS Catalog

Note Type Note Reference