AA850581 Marker Search Result - Rat Genome Database

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Marker: AA850581

Symbol: AA850581
Previously known as:
RGD ID: 5086847
Expected Size: 163 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.278,915,186 - 8,915,349 (+)MAPPERmRatBN7.2
Rnor_6.0711,783,506 - 11,783,668NCBIRnor6.0
Rnor_5.0711,951,221 - 11,951,383UniSTSRnor5.0
RGSC_v3.4710,425,676 - 10,425,838UniSTSRGSC3.4
Celera77,097,925 - 7,098,087UniSTS
RH 3.4 Map726.6UniSTS
Cytogenetic Map7q11UniSTS
Is Marker For: Genes:   Plekhj1   Sf3a2  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GTCTCGCGAGGTCCTTTGAGT
Reverse Primer CAGTGGACAGGAGCAGTAGTCG
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1308627Sf3a2splicing factor 3A subunit 2789095078916104Rat
GenBank Nucleotide FQ226139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 13 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
61410Bw19Body weight QTL 196.20.001body mass (VT:0001259)body weight (CMO:0000012)7144782185Rat
1300176Hrtrt10Heart rate QTL 103.19heart pumping trait (VT:2000009)heart rate (CMO:0000002)766427026029351Rat
9590102Sffal5Serum free fatty acids level QTL 58.620.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)7532901950329019Rat
631503Bp102Blood pressure QTL 1021.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7144822433Rat
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
10755438Coatc9Coat color QTL 90coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7352928048529280Rat
9590142Scort5Serum corticosterone level QTL 524.40.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)7131962314Rat
10059592Kidm45Kidney mass QTL 453.950.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)7757398552573985Rat
2317047Wbc4White blood cell count QTL 40.01leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)7135342956Rat
10755440Coatc10Coat color QTL 100coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7749649952496499Rat

1 to 10 of 13 rows


Database
Acc Id
Source(s)
NCBI Gene 299620 UniSTS
  314634 UniSTS