RH139088 Marker Search Result - Rat Genome Database

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Marker: RH139088

Symbol: RH139088
Previously known as: AI556225; 
RGD ID: 5076286
Expected Size: 164 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2851,547,904 - 51,548,068 (+)MAPPERmRatBN7.2
Rnor_6.0855,630,532 - 55,630,695NCBIRnor6.0
Rnor_5.0854,225,290 - 54,225,453UniSTSRnor5.0
RGSC_v3.4854,560,434 - 54,560,597UniSTSRGSC3.4
Celera851,093,372 - 51,093,535UniSTS
RH 3.4 Map8551.7UniSTS
Cytogenetic Map8q24UniSTS
Is Marker For: Genes:   Pou2af1  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer CCAGAGACAGACAGTGAGTGGG
Reverse Primer CAGCATATTGTCATAGCAACAGGA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1594728Pou2af1POU class 2 homeobox associating factor 185152181351548819Rat
RefSeq Transcripts NM_001109599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 61 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298065Scl16Serum cholesterol level QTL 163.8blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)83085640475856404Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
1578769Uae31Urinary albumin excretion QTL 313.30.001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)830848154101699754Rat
1298079Activ2Activity QTL 29.50.000001voluntary movement trait (VT:0003491)rearing measurement (CMO:0001515)84186687686866876Rat
11556286Cm81Cardiac mass QTL 810.01heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)83084815461290444Rat
70161Bp62Blood pressure QTL 622.90.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)84269268490165460Rat
1578765Klgr1Kidney lesion grade QTL 13.30.0001kidney morphology trait (VT:0002135)organ lesion measurement (CMO:0000677)830848154101699754Rat
1582222Epfw2Epididymal fat weight QTL 23.20.0005epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)83173772976737729Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
61464Niddm11Non-insulin dependent diabetes mellitus QTL 113.10.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)83558203280582032Rat

1 to 10 of 61 rows


Database
Acc Id
Source(s)
NCBI Gene 690528 UniSTS