AU047742 Marker Search Result - Rat Genome Database

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Marker: AU047742

Symbol: AU047742
Previously known as:
RGD ID: 5069828
Expected Size: 172 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23106,182,844 - 106,183,016 (+)MAPPERmRatBN7.2
Rnor_6.03111,000,720 - 111,000,891NCBIRnor6.0
Rnor_6.03112,634,758 - 112,634,929NCBIRnor6.0
Rnor_5.03117,551,358 - 117,551,529UniSTSRnor5.0
Rnor_5.03119,179,438 - 119,179,609UniSTSRnor5.0
RGSC_v3.43105,709,074 - 105,709,245UniSTSRGSC3.4
Celera3105,095,833 - 105,096,004UniSTS
Cytogenetic Map3q35UniSTS
Is Marker For: Genes:   Dnajc17  




#
Reference Title
Reference Citation
1. UniSTS Pipeline RGD automated pipelines


 
Forward Primer GATGCCTCCTTCTGACAGG
Reverse Primer AACAGTCTAATGAATCTCATCA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1308015Dnajc17DnaJ heat shock protein family (Hsp40) member C173106162197106195771Rat
GenBank Nucleotide AU047742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH614257.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 40 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2312673Scl63Serum cholesterol level QTL 630.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)398535255168026850Rat
2301414Kidm37Kidney mass QTL 370.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)370653097121056321Rat
1582238Bw68Body weight QTL 683.20.0064body mass (VT:0001259)body weight (CMO:0000012)353184593115665732Rat
2302373Gluco39Glucose level QTL 395.01blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)398535386161695835Rat
1582239Epfw1Epididymal fat weight QTL 14.50.0006epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)353184593115665732Rat
70216Cm14Cardiac mass QTL 142.1heart mass (VT:0007028)heart wet weight (CMO:0000069)331172320163586636Rat
2292591Esta4Estrogen-induced thymic atrophy QTL 4thymus mass (VT:0004954)thymus wet weight (CMO:0000855)347233211147415807Rat
1358362Srcrt2Stress Responsive Cort QTL 22.78blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)338192233133483320Rat
1582216Bw65Body weight QTL 656.3body mass (VT:0001259)body weight (CMO:0000012)3102200529115665732Rat
737818Hcar12Hepatocarcinoma resistance QTL 122.6liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)329463235118376539Rat

1 to 10 of 40 rows


Database
Acc Id
Source(s)
NCBI Gene 311329 UniSTS