D8Got35 Marker Search Result - Rat Genome Database

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Marker: D8Got35

Symbol: D8Got35
Previously known as: oxsts2608; OT52.13; 
RGD ID: 44375
Expected Size: 299 (bp)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2829,872,146 - 29,872,445 (+)MAPPERmRatBN7.2
Rnor_6.0832,570,743 - 32,571,041NCBIRnor6.0
Rnor_5.0832,595,543 - 32,595,841UniSTSRnor5.0
RGSC_v3.4831,185,048 - 31,185,347RGDRGSC3.4
RGSC_v3.4831,185,049 - 31,185,347UniSTSRGSC3.4
RGSC_v3.1831,193,815 - 31,194,113RGD
Celera831,333,192 - 31,333,490UniSTS
RH 3.4 Map8214.5UniSTS
RH 3.4 Map8214.5RGD
RH 2.0 Map8181.5RGD
Cytogenetic Map8q13UniSTS
Is Marker For: Genes:   Tmem45b  




#
Reference Title
Reference Citation
1. Data downloaded from Wellcome Trust, University of Oxford Data downloaded from Wellcome Trust, University of Oxford
2. High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence. Kwitek AE, etal., Genome Res. 2004 Apr;14(4):750-7
3. UniSTS Pipeline RGD automated pipelines
4. RH Map Project RH Map Project, Laboratory of Genetic Research Website, 1-JUL-99, Laboratory of Genetic Research, Medical College of Wisconsin, http://www.lgr.mcw.edu/LGR/
5. A high density integrated genetic linkage and radiation hybrid map of the laboratory rat Steen RG, Kwitek-Black AE, etal., Genome Research, 1999, 6:1-8


 
Forward Primer TGAGGACTGCCATTAGGTGA
Reverse Primer TGCTAGGGAGACAGGCAGA
 


The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
1305586Tmem45btransmembrane protein 45b82986527629910453Rat
GenBank Nucleotide AU025902 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


1 to 10 of 35 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1357398Slep3Serum leptin concentration QTL 33.43blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)8971246341866876Rat
2317030Wbc5White blood cell count QTL 53.210.005leukocyte quantity (VT:0000217)white blood cell count (CMO:0000027)8873663553736635Rat
1331804Cm30Cardiac mass QTL 303.77443heart mass (VT:0007028)heart wet weight (CMO:0000069)82824291253961020Rat
2317032Ginf2Gastrointestinal inflammation QTL 23.210.005liver integrity trait (VT:0010547)liver granuloma severity score (CMO:0002157)8470581049705810Rat
2301416Bp315Blood pressure QTL 3150.008arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)8767057852670578Rat
2317036Livw3Liver weight QTL 32.430.01liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)8470581049705810Rat
12880023Bw184Body weight QTL 1840.001body mass (VT:0001259)body weight (CMO:0000012)8209764047097640Rat
1354627Despr14Despair related QTL 140.0056locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)8768895552688955Rat
12880028Cm103Cardiac mass QTL 1030.02heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)8209764047097640Rat
2317051Aia18Adjuvant induced arthritis QTL 182.42joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)8873663553736635Rat

1 to 10 of 35 rows


Database
Acc Id
Source(s)
NCBI Gene 315524 UniSTS