SHGC-2664 Marker Search Result - Rat Genome Database

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Marker: SHGC-2664

Symbol: SHGC-2664
Previously known as: GDB:214688; GDB:224126; 
RGD ID: 1777367
Expected Size: 151 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371156,711,946 - 156,712,096UniSTSGRCh37
GRCh37X130,782,051 - 130,782,203UniSTSGRCh37
Build 36X130,609,732 - 130,609,884RGDNCBI36
Celera1129,783,178 - 129,783,328UniSTS
CeleraX131,168,479 - 131,168,631RGD
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map1q23.1UniSTS
HuRef1128,069,771 - 128,069,921UniSTS
HuRefX120,187,055 - 120,187,207UniSTS
GeneMap99-G3 RH Map18478.0UniSTS
Is Marker For: Genes:   HDGF   MRPL24   HDGFP1  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AGGACAGAGAGAAATAAGTGCCC
Reverse Primer GTTCTCAGAGCTAAACTTCCAAAG
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_001126050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001126051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK096411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL109853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL365256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL590666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC018991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BV177821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000462 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001609.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001631.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D16431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL298835.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL307986.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583122 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976304.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976430.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L24521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 3068 UniSTS
  474167 UniSTS
  79590 UniSTS
UniSTS SHGC-2664 UniSTS SSLP Pipeline