RH102456 Marker Search Result - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Marker: RH102456

Symbol: RH102456
Previously known as: stSG53904; 
RGD ID: 1697858
Expected Size: 130 (bp)
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37630,593,987 - 30,594,116UniSTSGRCh37
Build 36630,701,966 - 30,702,095RGDNCBI36
Celera632,192,105 - 32,192,234RGD
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map6p21.33UniSTS
HuRef630,394,155 - 30,394,284UniSTS
GeneMap99-GB4 RH Map6118.72UniSTS
Is Marker For: Genes:   ATAT1   MRPS18B  


Annotation


References - curated
# Reference Title Reference Citation
1. UniSTS Pipeline RGD automated pipelines

Strains and Sequence

Sequence
 
Forward Primer AACGGCAACAATGTTTAGCC
Reverse Primer AAATCCAGGAAATGAATGTTGC
 

Region

Nucleotide Sequences
RefSeq Transcripts NM_014046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB023049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB110933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB110934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB202094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC006049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF100761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL662800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL732442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL845353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BA000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX119957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX908728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003453 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH003501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000496 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM000668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CM001614.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR753328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR759778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS486075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DS990713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000254 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL300797.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GL583147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JH976331.1 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
NCBI Gene 28973 UniSTS
  79969 UniSTS
UniSTS RH102456 UniSTS SSLP Pipeline