D2S2389 Marker Search Result - Rat Genome Database

Symbol:

D2S2389

Previously known as:

AFMa090zh5; HSA090ZH5; GDB:614754;

RGD ID:

1342366

Expected Size:

231 (bp)

Position

Human Assembly	Chr	Position (strand)	Source	JBrowse
GRCh37	2	227,646,451 - 227,646,681	UniSTS	GRCh37
Build 36	2	227,354,695 - 227,354,925	RGD	NCBI36
Celera	2	221,415,981 - 221,416,211	RGD
Cytogenetic Map	2	q36	UniSTS
HuRef	2	219,490,027 - 219,490,257	UniSTS
Marshfield Genetic Map	2	228.61	UniSTS
Marshfield Genetic Map	2	228.61	RGD
Genethon Genetic Map	2	236.1	UniSTS
deCODE Assembly Map	2	229.85	UniSTS

Is Marker For:

Genes: IRS1

Annotation

References - curated

#	Reference Title	Reference Citation
1.	Comprehensive human genetic maps: individual and sex-specific variation in recombination.	Broman KW, etal., Am J Hum Genet 1998 Sep;63(3):861-9.
2.	UniSTS Pipeline	RGD automated pipelines

Strains and Sequence

Sequence


Forward Primer	GCCTCTGTAGGGACTTGTGA
Reverse Primer	TTTGTAGAGTACCCTGGAAGTTACC

Region

Nucleotide Sequences


GenBank Nucleotide	AC010735	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH003497	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH471063	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000253	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM000664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CM001610.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS486054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DS990692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL000029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL295483.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GL583000	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JH976313.1	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	Z51990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Additional Information

External Database Links

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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