Dnttip2 (deoxynucleotidyltransferase, terminal, interacting protein 2) - Rat Genome Database

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Gene: Dnttip2 (deoxynucleotidyltransferase, terminal, interacting protein 2) Rattus norvegicus
Analyze
Symbol: Dnttip2
Name: deoxynucleotidyltransferase, terminal, interacting protein 2
RGD ID: 6497192
Description: Predicted to be involved in RNA processing and ribosomal small subunit biogenesis. Predicted to be located in chromosome and nucleoplasm. Predicted to be part of small-subunit processome. Predicted to be active in nucleolus. Orthologous to human DNTTIP2 (deoxynucleotidyltransferase terminal interacting protein 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: deoxynucleotidyltransferase terminal-interacting protein 2; deoxynucleotidyltransferase terminal-interacting protein 2-like; LOC100910753; RGD1309084
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82213,058,975 - 213,071,020 (+)NCBIGRCr8
mRatBN7.22210,374,321 - 210,386,366 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2210,374,289 - 210,385,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2218,047,634 - 218,059,654 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02215,955,400 - 215,967,419 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02210,797,358 - 210,809,377 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02225,854,618 - 225,867,103 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02243,890,016 - 243,901,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2202,803,891 - 202,814,911 (+)NCBICelera
Cytogenetic Map2q42NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 76 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnttip2Rat(-)-epigallocatechin 3-gallate multiple interactionsISODNTTIP2 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in increased expression of DNTTIP2 mRNACTDPMID:22079256
Dnttip2Rat(1->4)-beta-D-glucan multiple interactionsISODnttip2 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of DNTTIP2 mRNACTDPMID:36331819
Dnttip2Rat1,2-dimethylhydrazine multiple interactionsISODnttip2 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of DNTTIP2 mRNACTDPMID:22206623
Dnttip2Rat17beta-estradiol increases expressionISODNTTIP2 (Homo sapiens)6480464Estradiol results in increased expression of DNTTIP2 mRNACTDPMID:31614463
Dnttip2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISODnttip2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of DNTTIP2 mRNACTDPMID:19465110
Dnttip2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of DNTTIP2 mRNACTDPMID:32109520
Dnttip2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISODNTTIP2 (Homo sapiens)6480464Tetrachlorodibenzodioxin results in increased expression of DNTTIP2 mRNACTDPMID:18762178
Dnttip2Rat2,3,7,8-Tetrachlorodibenzofuran increases expressionEXP 64804642 more ...CTDPMID:32109520
Dnttip2Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of DNTTIP2 mRNACTDPMID:21346803
Dnttip2Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of DNTTIP2 mRNACTDPMID:21346803
Dnttip2Rat4,4'-sulfonyldiphenol increases expressionISODnttip2 (Mus musculus)6480464bisphenol S results in increased expression of DNTTIP2 mRNACTDPMID:39298647
Dnttip2Ratacrylamide increases expressionISODNTTIP2 (Homo sapiens)6480464Acrylamide results in increased expression of DNTTIP2 mRNACTDPMID:32763439
Dnttip2Rataflatoxin M1 decreases expressionISODNTTIP2 (Homo sapiens)6480464Aflatoxin M1 results in decreased expression of DNTTIP2 mRNACTDPMID:30928695
Dnttip2Rataristolochic acid A decreases expressionISODNTTIP2 (Homo sapiens)6480464aristolochic acid I results in decreased expression of DNTTIP2 mRNACTDPMID:33212167
Dnttip2Ratazoxystrobin decreases expressionISODNTTIP2 (Homo sapiens)6480464azoxystrobin results in decreased expression of DNTTIP2 mRNACTDPMID:33512557
Dnttip2Ratbenzo[a]pyrene increases expressionISODNTTIP2 (Homo sapiens)6480464Benzo(a)pyrene results in increased expression of DNTTIP2 mRNACTDPMID:20106945 more ...
Dnttip2Ratbenzo[a]pyrene increases methylationISODNTTIP2 (Homo sapiens)6480464Benzo(a)pyrene results in increased methylation of DNTTIP2 promoterCTDPMID:27901495
Dnttip2Ratbenzo[a]pyrene increases expressionISODnttip2 (Mus musculus)6480464Benzo(a)pyrene results in increased expression of DNTTIP2 mRNACTDPMID:19770486
Dnttip2Ratbis(2-ethylhexyl) phthalate decreases expressionISODnttip2 (Mus musculus)6480464Diethylhexyl Phthalate results in decreased expression of DNTTIP2 mRNACTDPMID:33754040
Dnttip2Ratbisphenol A increases expressionEXP 6480464bisphenol A results in increased expression of DNTTIP2 mRNACTDPMID:25181051

1 to 20 of 76 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnttip2Ratribosomal small subunit biogenesis involved_inISODNTTIP2 (Homo sapiens)1624291 PMID:34516797RGDPMID:34516797
Dnttip2Ratribosomal small subunit biogenesis involved_inIEAUniProtKB:Q5QJE6 and ensembl:ENSP000004110101600115GO_REF:0000107EnsemblGO_REF:0000107
Dnttip2RatRNA processing involved_inIBAPANTHER:PTN000495509 and SGD:S0000040411600115GO_REF:0000033GO_CentralGO_REF:0000033

Cellular Component
1 to 11 of 11 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnttip2Ratchromosome located_inIEAUniProtKB:Q5QJE6 and ensembl:ENSP000004110101600115GO_REF:0000107EnsemblGO_REF:0000107
Dnttip2Ratchromosome located_inISODNTTIP2 (Homo sapiens)1624291 RGDGO_REF:0000052
Dnttip2Ratnucleolus located_inISODNTTIP2 (Homo sapiens)1624291 RGDGO_REF:0000052
Dnttip2Ratnucleolus located_inIEAUniProtKB:Q5QJE6 and ensembl:ENSP000004110101600115GO_REF:0000107EnsemblGO_REF:0000107
Dnttip2Ratnucleolus is_active_inIBAPANTHER:PTN000495509 and UniProtKB:Q5QJE61600115GO_REF:0000033GO_CentralGO_REF:0000033
Dnttip2Ratnucleolus located_inIEAUniProtKB-SubCell:SL-01881600115GO_REF:0000044UniProtGO_REF:0000044
Dnttip2Ratnucleoplasm located_inISODNTTIP2 (Homo sapiens)1624291 RGDGO_REF:0000052
Dnttip2Ratnucleoplasm located_inIEAUniProtKB:Q5QJE6 and ensembl:ENSP000004110101600115GO_REF:0000107EnsemblGO_REF:0000107
Dnttip2Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Dnttip2Ratsmall-subunit processome part_ofIEAUniProtKB:Q5QJE6 and ensembl:ENSP000004110101600115GO_REF:0000107EnsemblGO_REF:0000107
Dnttip2Ratsmall-subunit processome part_ofISODNTTIP2 (Homo sapiens)1624291 PMID:34516797RGDPMID:34516797
1 to 11 of 11 rows

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Dnttip2Ratprotein binding enablesISODNTTIP2 (Homo sapiens)1624291UniProtKB:O76064 more ...RGDPMID:32296183


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:22658674   PMID:22681889  



Dnttip2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82213,058,975 - 213,071,020 (+)NCBIGRCr8
mRatBN7.22210,374,321 - 210,386,366 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2210,374,289 - 210,385,581 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2218,047,634 - 218,059,654 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02215,955,400 - 215,967,419 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02210,797,358 - 210,809,377 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02225,854,618 - 225,867,103 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02243,890,016 - 243,901,692 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera2202,803,891 - 202,814,911 (+)NCBICelera
Cytogenetic Map2q42NCBI
DNTTIP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38193,866,284 - 93,879,206 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl193,866,284 - 93,879,918 (-)EnsemblGRCh38hg38GRCh38
GRCh37194,331,840 - 94,344,762 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36194,107,924 - 94,117,330 (-)NCBINCBI36Build 36hg18NCBI36
Celera192,586,515 - 92,598,428 (-)NCBICelera
Cytogenetic Map1p22.1NCBI
HuRef192,453,561 - 92,465,814 (-)NCBIHuRef
CHM1_1194,449,991 - 94,459,730 (-)NCBICHM1_1
T2T-CHM13v2.0193,712,032 - 93,727,460 (-)NCBIT2T-CHM13v2.0
Dnttip2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm393122,068,045 - 122,078,920 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl3122,068,037 - 122,078,920 (+)EnsemblGRCm39 Ensembl
GRCm383122,274,414 - 122,285,271 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl3122,274,388 - 122,285,271 (+)EnsemblGRCm38mm10GRCm38
MGSCv373121,977,332 - 121,988,189 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv363122,266,436 - 122,277,293 (+)NCBIMGSCv36mm8
Celera3128,671,337 - 128,682,192 (+)NCBICelera
Cytogenetic Map3G1NCBI
cM Map352.94NCBI
Dnttip2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955423817,108 - 828,618 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955423817,034 - 828,706 (+)NCBIChiLan1.0ChiLan1.0
DNTTIP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21133,138,378 - 133,154,936 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11132,297,820 - 132,312,040 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0196,528,951 - 96,542,869 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1195,260,910 - 95,272,834 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl195,260,910 - 95,272,834 (-)Ensemblpanpan1.1panPan2
DNTTIP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1655,248,437 - 55,264,187 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl655,235,542 - 55,263,728 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha657,956,352 - 57,973,334 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0655,624,197 - 55,640,983 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl655,624,212 - 55,671,907 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1655,303,929 - 55,320,881 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0655,289,044 - 55,305,809 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0655,741,618 - 55,758,528 (+)NCBIUU_Cfam_GSD_1.0
Dnttip2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058103,556,052 - 103,566,645 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365375,380,919 - 5,394,944 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365375,381,358 - 5,391,956 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DNTTIP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4123,394,740 - 123,414,511 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14123,394,771 - 123,408,460 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24135,040,518 - 135,053,878 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DNTTIP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12039,368,484 - 39,381,022 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2039,369,348 - 39,381,537 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603378,669,649 - 78,682,103 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dnttip2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247423,759,621 - 3,770,475 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Dnttip2
108 total Variants

Predicted Target Of
Summary Value
Count of predictions:11
Count of miRNA genes:9
Interacting mature miRNAs:11
Transcripts:ENSRNOT00000036931
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1578648Bss11Bone structure and strength QTL 114.7femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)2114837527211674221Rat
1358356Srcrt1Stress Responsive Cort QTL13.66blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)2161699179222436696Rat
1331734Bp204Blood pressure QTL 2043.61192arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2168358098223265385Rat
2301408Kidm36Kidney mass QTL 360.002kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)2190613715226808892Rat
2307174Activ3Activity QTL 34.830.000058locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)2168594495213594495Rat
1598813Memor9Memory QTL 92.7exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)2199341726234244620Rat
1331794Bp202Blood pressure QTL 2023.66819arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2141194931223265385Rat
1331805Cm29Cardiac mass QTL 293.50746heart mass (VT:0007028)heart wet weight (CMO:0000069)2141194931223265385Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
2298479Eau5Experimental allergic uveoretinitis QTL 50.0021uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)2202446871237938339Rat

1 to 10 of 47 rows
RH140811  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82213,069,233 - 213,070,056 (+)Marker Load Pipeline
mRatBN7.22210,384,579 - 210,385,402 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,866,141NCBIRnor6.0
Rnor_5.02243,900,718 - 243,901,540UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,933,355UniSTSRGSC3.4
Celera2202,813,125 - 202,813,947UniSTS
RH 3.4 Map21523.0UniSTS
AU045884  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr82213,069,233 - 213,070,039 (+)Marker Load Pipeline
mRatBN7.22210,384,579 - 210,385,385 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,866,124NCBIRnor6.0
Rnor_5.02243,900,718 - 243,901,523UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,933,338UniSTSRGSC3.4
Celera2202,813,125 - 202,813,930UniSTS
RH124727  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22210,384,579 - 210,384,665 (+)MAPPERmRatBN7.2
Rnor_6.02225,865,319 - 225,865,404NCBIRnor6.0
Rnor_5.02243,900,718 - 243,900,803UniSTSRnor5.0
RGSC_v3.42218,932,533 - 218,932,618UniSTSRGSC3.4
Celera2202,813,125 - 202,813,210UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


RefSeq Transcripts NM_001399742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000036931   ⟹   ENSRNOP00000037874
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,308 - 210,385,581 (+)Ensembl
Rnor_6.0 Ensembl2225,854,629 - 225,866,357 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097814   ⟹   ENSRNOP00000077110
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,289 - 210,383,466 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000108329   ⟹   ENSRNOP00000086946
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl2210,374,289 - 210,384,923 (+)Ensembl
RefSeq Acc Id: NM_001399742   ⟹   NP_001386671
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr82213,058,975 - 213,071,020 (+)NCBI
mRatBN7.22210,374,321 - 210,386,366 (+)NCBI
Protein RefSeqs NP_001386671 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000037874
  ENSRNOP00000037874.5
  ENSRNOP00000077110.1
  ENSRNOP00000086946.1
Ensembl Acc Id: ENSRNOP00000037874   ⟸   ENSRNOT00000036931
Ensembl Acc Id: ENSRNOP00000077110   ⟸   ENSRNOT00000097814
Ensembl Acc Id: ENSRNOP00000086946   ⟸   ENSRNOT00000108329
RefSeq Acc Id: NP_001386671   ⟸   NM_001399742
- UniProtKB: D3ZHM7 (UniProtKB/TrEMBL),   A0A8I6GEL2 (UniProtKB/TrEMBL)
Fcf2 pre-rRNA processing C-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-D3ZHM7-F1-model_v2 AlphaFold D3ZHM7 1-761 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13691726
Promoter ID:EPDNEW_R2248
Type:initiation region
Name:Dnttip2_1
Description:deoxynucleotidyltransferase, terminal, interacting protein 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.02225,854,650 - 225,854,710EPDNEW


1 to 17 of 17 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-51378 BioCyc
Ensembl Genes ENSRNOG00000025025 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000036931 ENTREZGENE
  ENSRNOT00000036931.7 UniProtKB/TrEMBL
  ENSRNOT00000097814.1 UniProtKB/TrEMBL
  ENSRNOT00000108329.1 UniProtKB/TrEMBL
InterPro Fcf2 UniProtKB/TrEMBL
  Fcf2/DNTTIP2 UniProtKB/TrEMBL
NCBI Gene LOC100910753 ENTREZGENE
PANTHER DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 UniProtKB/TrEMBL
  PTHR21686 UniProtKB/TrEMBL
Pfam Fcf2 UniProtKB/TrEMBL
PhenoGen Dnttip2 PhenoGen
RatGTEx ENSRNOG00000025025 RatGTEx
UniProt A0A8I5Y170_RAT UniProtKB/TrEMBL
  A0A8I6GEL2 ENTREZGENE, UniProtKB/TrEMBL
  D3ZHM7 ENTREZGENE, UniProtKB/TrEMBL
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-08 Dnttip2  deoxynucleotidyltransferase, terminal, interacting protein 2  LOC100910753  deoxynucleotidyltransferase terminal-interacting protein 2-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910753  deoxynucleotidyltransferase terminal-interacting protein 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL