Ero1a (endoplasmic reticulum oxidoreductase 1 alpha) - Rat Genome Database

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Gene: Ero1a (endoplasmic reticulum oxidoreductase 1 alpha) Rattus norvegicus
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Symbol: Ero1a
Name: endoplasmic reticulum oxidoreductase 1 alpha
RGD ID: 621713
Description: Predicted to enable protein-disulfide reductase activity. Involved in cellular response to hypoxia. Located in dendrite. Orthologous to human ERO1A (endoplasmic reticulum oxidoreductase 1 alpha); PARTICIPATES IN Endoplasmic Reticulum-associated degradation pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: endoplasmic oxidoreductin-1-like protein; endoplasmic reticulum oxidoreductase alpha; endoplasmic reticulum oxidoreductin-1-like protein; ERO1-L; ERO1-L-alpha; ERO1-like (S. cerevisiae); ERO1-like protein alpha; Ero1l; global ischemia-induced protein 11; LOC360278; oxidoreductin-1-L-alpha
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81520,974,771 - 21,010,170 (-)NCBIGRCr8
mRatBN7.21518,495,037 - 18,530,440 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,492,945 - 18,530,478 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,289,698 - 21,325,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,246,643 - 22,282,158 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,503,217 - 20,538,731 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,619,947 - 19,655,381 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,619,973 - 19,655,381 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,585,168 - 23,620,355 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,169,438 - 21,205,536 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11521,169,450 - 21,205,536NCBI
Celera1518,923,324 - 18,958,689 (-)NCBICelera
Cytogenetic Map15p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ero1aRatBrain Hypoxia-Ischemia  IEP 632668mRNA:increased expression:hippocampusRGD 

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Object Symbol
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Original Reference(s)
Ero1aRat(1->4)-beta-D-glucan multiple interactionsISOEro1a (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ERO1L mRNACTDPMID:36331819
Ero1aRat1,1-dichloroethene increases expressionISOEro1a (Mus musculus)6480464vinylidene chloride results in increased expression of ERO1A mRNACTDPMID:26682919
Ero1aRat1,2-dimethylhydrazine decreases expressionISOEro1a (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of ERO1L mRNACTDPMID:22206623
Ero1aRat17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of ERO1L mRNACTDPMID:32145629
Ero1aRat17beta-hydroxy-5alpha-androstan-3-one increases expressionISOERO1A (Homo sapiens)6480464Dihydrotestosterone results in increased expression of ERO1A mRNACTDPMID:29581250
Ero1aRat1H-pyrazole increases expressionISOEro1a (Mus musculus)6480464pyrazole results in increased expression of ERO1A mRNACTDPMID:17945193
Ero1aRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ERO1A mRNACTDPMID:25529477 and PMID:33387578
Ero1aRat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOEro1a (Mus musculus)6480464[TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in decreased expression of ERO1A mRNACTDPMID:25975270
Ero1aRat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of ERO1A mRNACTDPMID:21346803
Ero1aRat2-hydroxypropanoic acid decreases expressionISOERO1A (Homo sapiens)6480464Lactic Acid results in decreased expression of ERO1A mRNACTDPMID:30851411
Ero1aRat2-palmitoylglycerol increases expressionISOERO1A (Homo sapiens)64804642-palmitoylglycerol results in increased expression of ERO1A mRNACTDPMID:37199045
Ero1aRat3,3',4,4',5-pentachlorobiphenyl increases expressionEXP 64804643 more ...CTDPMID:23196670
Ero1aRat3-chloropropane-1,2-diol decreases expressionEXP 6480464alpha-Chlorohydrin results in decreased expression of ERO1A proteinCTDPMID:26072098
Ero1aRat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOERO1A (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of ERO1A mRNACTDPMID:28628672
Ero1aRat4,4'-sulfonyldiphenol multiple interactionsISOERO1A (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in increased expression of ERO1A mRNACTDPMID:28628672
Ero1aRat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of ERO1A mRNACTDPMID:36041667
Ero1aRatadefovir pivoxil increases expressionISOERO1A (Homo sapiens)6480464adefovir dipivoxil results in increased expression of ERO1A mRNACTDPMID:25596134
Ero1aRataflatoxin B1 decreases expressionISOEro1a (Mus musculus)6480464Aflatoxin B1 results in decreased expression of ERO1A mRNACTDPMID:19770486
Ero1aRataldehydo-D-glucose decreases expressionISOEro1a (Mus musculus)6480464Glucose results in decreased expression of ERO1A mRNACTDPMID:17178593
Ero1aRataldehydo-D-glucose multiple interactionsEXP 6480464Chlorogenic Acid inhibits the reaction [Glucose results in increased expression of ERO1A protein] and Metformin inhibits the reaction [Glucose results in increased expression of ERO1A protein]CTDPMID:34801538

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Biological Process
1 to 20 of 44 rows

  
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Original Reference(s)
Ero1aRatapoptotic process involved_inIEAUniProtKB-KW:KW-00531600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatbrown fat cell differentiation acts_upstream_of_or_withinISOEro1a (Mus musculus)1624291 PMID:18492766RGDPMID:18492766
Ero1aRatbrown fat cell differentiation acts_upstream_of_or_withinIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatcell redox homeostasis involved_inISSUniProtKB:Q96HE71600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatcell redox homeostasis acts_upstream_of_or_withinIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatcell redox homeostasis involved_inIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatcell redox homeostasis acts_upstream_of_or_withinISOEro1a (Mus musculus)1624291MGI:1859815 more ...RGDPMID:23589496
Ero1aRatcell redox homeostasis involved_inISOERO1A (Homo sapiens)1624291 PMID:29858230RGDPMID:29858230
Ero1aRatcellular response to hypoxia  IEP 10401130 RGD 
Ero1aRatchaperone cofactor-dependent protein refolding involved_inISOERO1A (Homo sapiens)1624291 PMID:11707400RGDPMID:11707400
Ero1aRatchaperone cofactor-dependent protein refolding involved_inIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatcollagen fibril organization acts_upstream_of_or_withinIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatcollagen fibril organization acts_upstream_of_or_withinISOEro1a (Mus musculus)1624291 PMID:28106121RGDPMID:28106121
Ero1aRatendoplasmic reticulum unfolded protein response acts_upstream_of_or_withinISOEro1a (Mus musculus)1624291 PMID:15601821RGDPMID:15601821
Ero1aRatendoplasmic reticulum unfolded protein response acts_upstream_of_or_withinIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatextracellular matrix organization acts_upstream_of_or_withinISOEro1a (Mus musculus)1624291MGI:1859815 more ...RGDPMID:22981861
Ero1aRatextracellular matrix organization acts_upstream_of_or_withinIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatintrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress involved_inISSUniProtKB:Q8R1801600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatintrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress involved_inIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatintrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress involved_inISOEro1a (Mus musculus)1624291 PMID:19752026RGDPMID:19752026
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Cellular Component
1 to 20 of 23 rows

  
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Original Reference(s)
Ero1aRatcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatdendrite  IDA 632668 RGD 
Ero1aRatdendrite located_inIEAUniProtKB-SubCell:SL-02831600115GO_REF:0000044UniProtGO_REF:0000044
Ero1aRatendoplasmic reticulum located_inISOERO1A (Homo sapiens)1624291 PMID:10671517 and PMID:29858230RGDPMID:10671517 and PMID:29858230
Ero1aRatendoplasmic reticulum is_active_inISOEro1a (Mus musculus)1624291 PMID:28106121RGDPMID:28106121
Ero1aRatendoplasmic reticulum located_inIEAUniProtKB-KW:KW-02561600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatendoplasmic reticulum is_active_inIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatendoplasmic reticulum located_inISSUniProtKB:Q96HE71600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatendoplasmic reticulum located_inIEAInterPro:IPR0072661600115GO_REF:0000002InterProGO_REF:0000002
Ero1aRatendoplasmic reticulum located_inIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatendoplasmic reticulum membrane located_inIEAUniProtKB-SubCell:SL-00971600115GO_REF:0000044UniProtGO_REF:0000044
Ero1aRatendoplasmic reticulum membrane is_active_inIBAPANTHER:PTN000289179 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ero1aRatextracellular region located_inIEAUniProtKB-KW:KW-09641600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatextracellular region located_inIEAUniProtKB-SubCell:SL-02431600115GO_REF:0000044UniProtGO_REF:0000044
Ero1aRatextracellular space located_inISSUniProtKB:Q96HE71600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatextracellular space located_inIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatextracellular space located_inISOERO1A (Homo sapiens)1624291 PMID:29858230RGDPMID:29858230
Ero1aRatGolgi apparatus located_inIEAUniProtKB-KW:KW-03331600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatGolgi lumen located_inISSUniProtKB:Q96HE71600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatGolgi lumen located_inIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Original Reference(s)
Ero1aRatFAD binding enablesIEAInterPro:IPR0072661600115GO_REF:0000002InterProGO_REF:0000002
Ero1aRatoxidoreductase activity enablesISSUniProtKB:Q96HE71600115GO_REF:0000024UniProtGO_REF:0000024
Ero1aRatoxidoreductase activity enablesISOEro1a (Mus musculus)1624291 PMID:15601821RGDPMID:15601821
Ero1aRatoxidoreductase activity enablesIEAUniProtKB-KW:KW-05601600115GO_REF:0000043UniProtGO_REF:0000043
Ero1aRatoxidoreductase activity enablesIEAUniProtKB:Q96HE7 and ensembl:ENSP000003790421600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatoxidoreductase activity enablesIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatoxidoreductase activity enablesISOERO1A (Homo sapiens)1624291 PMID:11707400 and PMID:29858230RGDPMID:11707400 and PMID:29858230
Ero1aRatprotein binding enablesISOERO1A (Homo sapiens)1624291UniProtKB:P07237 more ...RGDPMID:17170699 more ...
Ero1aRatprotein-disulfide reductase activity enablesIEAInterPro:IPR0072661600115GO_REF:0000002InterProGO_REF:0000002
Ero1aRatprotein-disulfide reductase activity enablesIEAUniProtKB:Q8R180 and ensembl:ENSMUSP000000223781600115GO_REF:0000107EnsemblGO_REF:0000107
Ero1aRatprotein-disulfide reductase activity enablesIBAMGI:1354385 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ero1aRatprotein-disulfide reductase activity enablesISOEro1a (Mus musculus)1624291 PMID:20308425RGDPMID:20308425
Ero1aRatthiol oxidase activity enablesIEAInterPro:IPR0072661600115GO_REF:0000002InterProGO_REF:0000002
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Imported Annotations - KEGG (archival)

Object Symbol
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Original Reference(s)
Ero1aRatEndoplasmic Reticulum-associated degradation pathway  IEA 6907045 KEGGrno:04141

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#
Reference Title
Reference Citation
1. Ero1-L, an ischemia-inducible gene from rat brain with homology to global ischemia-induced gene 11 (Giig11), is localized to neuronal dendrites by a dispersed identifier (ID) element-dependent mechanism. Chen D, etal., J Neurochem 2003 May;85(3):670-9.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. The cellular oxygen tension regulates expression of the endoplasmic oxidoreductase ERO1-Lalpha. Gess B, etal., Eur J Biochem. 2003 May;270(10):2228-35.
4. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
5. Accelerated senescence in kidneys of low-birth-weight rats after catch-up growth. Luyckx VA, etal., Am J Physiol Renal Physiol. 2009 Dec;297(6):F1697-705. doi: 10.1152/ajprenal.00462.2009. Epub 2009 Oct 14.
6. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Comprehensive gene review and curation RGD comprehensive gene curation
11. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
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PMID:10671517   PMID:11707400   PMID:15601821   PMID:18492766   PMID:19752026   PMID:19946888   PMID:20308425   PMID:22981861   PMID:23589496   PMID:25122773   PMID:25452428   PMID:30058081  
PMID:31176989   PMID:32626998   PMID:35086342  



Ero1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81520,974,771 - 21,010,170 (-)NCBIGRCr8
mRatBN7.21518,495,037 - 18,530,440 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1518,492,945 - 18,530,478 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1521,289,698 - 21,325,207 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01522,246,643 - 22,282,158 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01520,503,217 - 20,538,731 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01519,619,947 - 19,655,381 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1519,619,973 - 19,655,381 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01523,585,168 - 23,620,355 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41521,169,438 - 21,205,536 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11521,169,450 - 21,205,536NCBI
Celera1518,923,324 - 18,958,689 (-)NCBICelera
Cytogenetic Map15p14NCBI
ERO1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381452,639,915 - 52,695,558 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1452,639,915 - 52,695,900 (-)EnsemblGRCh38hg38GRCh38
GRCh371453,106,633 - 53,162,276 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361452,178,355 - 52,232,169 (-)NCBINCBI36Build 36hg18NCBI36
Build 341452,178,356 - 52,232,169NCBI
Celera1432,976,214 - 33,030,020 (-)NCBICelera
Cytogenetic Map14q22.1NCBI
HuRef1433,269,409 - 33,323,505 (-)NCBIHuRef
CHM1_11453,047,533 - 53,101,335 (-)NCBICHM1_1
T2T-CHM13v2.01446,847,757 - 46,903,365 (-)NCBIT2T-CHM13v2.0
Ero1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391445,520,544 - 45,556,029 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1445,520,544 - 45,556,228 (-)EnsemblGRCm39 Ensembl
GRCm381445,283,087 - 45,318,572 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1445,283,087 - 45,318,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv371445,903,996 - 45,938,202 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361444,206,198 - 44,240,404 (-)NCBIMGSCv36mm8
Celera1441,464,909 - 41,498,352 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1422.86NCBI
Ero1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540910,502,554 - 10,530,376 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540910,495,892 - 10,533,383 (+)NCBIChiLan1.0ChiLan1.0
ERO1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21553,770,587 - 53,826,868 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11452,987,098 - 53,043,159 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01433,236,087 - 33,292,127 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11451,520,048 - 51,575,792 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1451,520,048 - 51,575,798 (-)Ensemblpanpan1.1panPan2
ERO1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1828,864,642 - 28,913,864 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl828,864,925 - 28,914,368 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha828,609,553 - 28,658,814 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0829,030,663 - 29,080,527 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl829,029,758 - 29,081,013 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1828,704,719 - 28,754,465 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0828,776,955 - 28,826,980 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0829,105,676 - 29,155,434 (-)NCBIUU_Cfam_GSD_1.0
Ero1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864076,380,350 - 76,425,758 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366972,154,065 - 2,199,926 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366972,154,517 - 2,199,913 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ERO1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1182,265,261 - 182,318,195 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11182,268,651 - 182,318,147 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21202,436,374 - 202,588,694 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ERO1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12429,708,521 - 29,777,939 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2429,717,710 - 29,777,918 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605317,992,077 - 18,051,108 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ero1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473116,425,437 - 16,473,043 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473116,425,496 - 16,476,120 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ero1a
205 total Variants

Predicted Target Of
Summary Value
Count of predictions:364
Count of miRNA genes:226
Interacting mature miRNAs:277
Transcripts:ENSRNOT00000009404
Prediction methods:Miranda, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 19 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat

1 to 10 of 19 rows
RH143391  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,530,310 - 18,530,410 (+)MAPPERmRatBN7.2
Rnor_6.01519,655,252 - 19,655,351NCBIRnor6.0
Rnor_5.01523,620,226 - 23,620,325UniSTSRnor5.0
RGSC_v3.41521,205,407 - 21,205,506UniSTSRGSC3.4
Celera1518,958,560 - 18,958,659UniSTS
RH 3.4 Map15145.2UniSTS
Cytogenetic Map15p14UniSTS
AI599520  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21518,493,244 - 18,493,392 (+)MAPPERmRatBN7.2
Rnor_6.01519,618,155 - 19,618,302NCBIRnor6.0
Rnor_5.01523,583,376 - 23,583,523UniSTSRnor5.0
RGSC_v3.41521,167,646 - 21,167,793UniSTSRGSC3.4
Celera1518,921,532 - 18,921,679UniSTS
RH 3.4 Map15149.6UniSTS
Cytogenetic Map15p14UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000009404   ⟹   ENSRNOP00000009404
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,495,838 - 18,530,477 (-)Ensembl
Rnor_6.0 Ensembl1519,619,973 - 19,655,381 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000100831   ⟹   ENSRNOP00000094942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,492,946 - 18,530,478 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000116811   ⟹   ENSRNOP00000094430
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1518,492,945 - 18,530,447 (-)Ensembl
RefSeq Acc Id: NM_138528   ⟹   NP_612537
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81520,974,771 - 21,010,170 (-)NCBI
mRatBN7.21518,495,037 - 18,530,440 (-)NCBI
Rnor_6.01519,619,947 - 19,655,381 (-)NCBI
Rnor_5.01523,585,168 - 23,620,355 (-)NCBI
RGSC_v3.41521,169,438 - 21,205,536 (-)RGD
Celera1518,923,324 - 18,958,689 (-)RGD
Sequence:
1 to 9 of 9 rows
Protein RefSeqs NP_001420791 (Get FASTA)   NCBI Sequence Viewer  
  NP_612537 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAK01420 (Get FASTA)   NCBI Sequence Viewer  
  AAL61547 (Get FASTA)   NCBI Sequence Viewer  
  AAL61548 (Get FASTA)   NCBI Sequence Viewer  
  AAL96669 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000094430
  ENSRNOP00000094430.1
GenBank Protein Q8R4A1 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_612537   ⟸   NM_138528
- Peptide Label: precursor
- UniProtKB: Q8VH30 (UniProtKB/Swiss-Prot),   Q8VH29 (UniProtKB/Swiss-Prot),   Q8R4A1 (UniProtKB/Swiss-Prot),   A0A8I6B1Q4 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009404   ⟸   ENSRNOT00000009404
Ensembl Acc Id: ENSRNOP00000094942   ⟸   ENSRNOT00000100831
Ensembl Acc Id: ENSRNOP00000094430   ⟸   ENSRNOT00000116811

Name Modeler Protein Id AA Range Protein Structure
AF-Q8R4A1-F1-model_v2 AlphaFold Q8R4A1 1-464 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13699595
Promoter ID:EPDNEW_R10118
Type:multiple initiation site
Name:Ero1a_1
Description:endoplasmic reticulum oxidoreductase 1 alpha
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01519,655,416 - 19,655,476EPDNEW


1 to 25 of 25 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-14222 BioCyc
Ensembl Genes ENSRNOG00000006462 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000116811 ENTREZGENE
  ENSRNOT00000116811.1 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7099384 IMAGE-MGC_LOAD
InterPro Ero1 UniProtKB/Swiss-Prot
  ERO1-like_sf UniProtKB/Swiss-Prot
KEGG Report rno:171562 UniProtKB/Swiss-Prot
MGC_CLONE MGC:91493 IMAGE-MGC_LOAD
NCBI Gene 171562 ENTREZGENE
PANTHER ERO1-LIKE PROTEIN ALPHA UniProtKB/Swiss-Prot
  PTHR12613 UniProtKB/Swiss-Prot
Pfam ERO1 UniProtKB/Swiss-Prot
PhenoGen Ero1a PhenoGen
PIRSF ERO1 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000006462 RatGTEx
Superfamily-SCOP SSF110019 UniProtKB/Swiss-Prot
UniProt A0A8I6B1Q4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8L2UI53 ENTREZGENE, UniProtKB/TrEMBL
  A6KDZ5 ENTREZGENE, UniProtKB/TrEMBL
  ERO1A_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q8VH29 ENTREZGENE
  Q8VH30 ENTREZGENE
UniProt Secondary Q8VH29 UniProtKB/Swiss-Prot
  Q8VH30 UniProtKB/Swiss-Prot
1 to 25 of 25 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-07-07 Ero1a  endoplasmic reticulum oxidoreductase 1 alpha  Ero1a  endoplasmic reticulum oxidoreductase alpha  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-06-24 Ero1a  endoplasmic reticulum oxidoreductase alpha  Ero1l  ERO1-like (S. cerevisiae)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-02-23 Ero1l  ERO1-like (S. cerevisiae)  Ero1l_predicted  ERO1-like (S. cerevisiae) (predicted)  Data merged from RGD:1308220 737654 APPROVED
2005-01-20 Ero1l  ERO1-like (S. cerevisiae)      Symbol and Name status set to approved 1299863 APPROVED
2005-01-12 Ero1l_predicted  ERO1-like (S. cerevisiae) (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL
2002-08-07 Ero1l  ERO1-like (S. cerevisiae)      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_homology homologous to ischemia-inducible gene 11(Giig11) 632668
gene_process involved in oxidative endoplasmic reticulum protein folding 632668