Ip6k2 (inositol hexakisphosphate kinase 2) - Rat Genome Database

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Gene: Ip6k2 (inositol hexakisphosphate kinase 2) Rattus norvegicus
Analyze
Symbol: Ip6k2
Name: inositol hexakisphosphate kinase 2
RGD ID: 620529
Description: Predicted to enable flavonoid binding activity and inositol hexakisphosphate 5-kinase activity. Involved in phosphate ion transport. Predicted to be located in cell junction; fibrillar center; and nucleoplasm. Predicted to be active in cytoplasm and nucleus. Orthologous to human IP6K2 (inositol hexakisphosphate kinase 2); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ihpk2; inositol hexaphosphate kinase 2; InsP6 kinase 2; P(i)-uptake stimulator; Pius
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,362,154 - 118,388,668 (+)NCBIGRCr8
mRatBN7.28109,483,843 - 109,510,172 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,484,310 - 109,510,166 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8115,103,519 - 115,127,769 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,302,698 - 113,326,948 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08111,145,495 - 111,169,746 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,574,136 - 117,599,849 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,574,161 - 117,599,848 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,921,132 - 116,944,750 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,836,756 - 113,861,895 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,870,909 - 113,881,351 (+)NCBI
Celera8108,780,684 - 108,804,293 (+)NCBICelera
Cytogenetic Map8q32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ip6k2RatAicardi-Goutieres Syndrome 1  ISOIP6K2 (Homo sapiens)8554872ClinVar Annotator: match by term: Aicardi-Goutieres syndrome 1ClinVarPMID:16845398 and PMID:28492532
Ip6k2RatProgressive Microcephaly with Seizures and Cerebral and Cerebellar Atrophy  ISOIP6K2 (Homo sapiens)8554872ClinVar Annotator: match by term: Microcephaly more ...ClinVarPMID:28492532
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ip6k2RatHuntington's disease  ISOIP6K2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21652713

1 to 20 of 111 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ip6k2Rat(+)-catechin multiple interactionsISOIP6K2 (Homo sapiens)6480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of IP6K2 mRNACTDPMID:24763279
Ip6k2Rat(-)-epigallocatechin 3-gallate multiple interactionsISOIP6K2 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in increased expression of IP6K2 mRNACTDPMID:22079256
Ip6k2Rat1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane decreases expressionISOIp6k2 (Mus musculus)64804642 more ...CTDPMID:25575267
Ip6k2Rat1,2-dimethylhydrazine decreases expressionISOIp6k2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of IP6K2 mRNACTDPMID:22206623
Ip6k2Rat1,2-dimethylhydrazine multiple interactionsISOIp6k2 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of IP6K2 mRNACTDPMID:22206623
Ip6k2Rat17beta-estradiol decreases expressionISOIP6K2 (Homo sapiens)6480464Estradiol results in decreased expression of IP6K2 mRNACTDPMID:23019147 and PMID:31614463
Ip6k2Rat17beta-estradiol affects expressionEXP 6480464Estradiol affects the expression of IP6K2 mRNACTDPMID:32145629
Ip6k2Rat17beta-estradiol decreases expressionISOIp6k2 (Mus musculus)6480464Estradiol results in decreased expression of IP6K2 mRNACTDPMID:25575267 and PMID:39298647
Ip6k2Rat17beta-estradiol affects expressionISOIP6K2 (Homo sapiens)6480464Estradiol affects the expression of IP6K2 mRNACTDPMID:22574217
Ip6k2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of IP6K2 mRNACTDPMID:21215274 and PMID:33387578
Ip6k2Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of IP6K2 mRNACTDPMID:32109520
Ip6k2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOIP6K2 (Homo sapiens)6480464Tetrachlorodibenzodioxin affects the expression of IP6K2 mRNACTDPMID:22574217
Ip6k2Rat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of IP6K2 mRNACTDPMID:21346803
Ip6k2Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of IP6K2 mRNACTDPMID:21346803
Ip6k2Rat2-methylcholine affects expressionISOIP6K2 (Homo sapiens)6480464beta-methylcholine affects the expression of IP6K2 mRNACTDPMID:21179406
Ip6k2Rat4,4'-sulfonyldiphenol decreases expressionISOIp6k2 (Mus musculus)6480464bisphenol S results in decreased expression of IP6K2 mRNACTDPMID:39298647
Ip6k2Rat4,4'-sulfonyldiphenol increases methylationISOIP6K2 (Homo sapiens)6480464bisphenol S results in increased methylation of IP6K2 geneCTDPMID:31601247
Ip6k2Rat4-hydroxyphenyl retinamide increases expressionISOIp6k2 (Mus musculus)6480464Fenretinide results in increased expression of IP6K2 mRNACTDPMID:28973697
Ip6k2Rat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of IP6K2 mRNACTDPMID:25825206
Ip6k2Rat6-propyl-2-thiouracil decreases expressionEXP 6480464Propylthiouracil results in decreased expression of IP6K2 mRNACTDPMID:30047161

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Biological Process
1 to 20 of 23 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ip6k2Ratcellular response to flavonoid involved_inISOIP6K2 (Homo sapiens)1624291 PMID:30624931RGDPMID:30624931
Ip6k2Ratcellular response to flavonoid involved_inISSUniProtKB:Q9UHH91600115GO_REF:0000024UniProtGO_REF:0000024
Ip6k2Ratcellular response to flavonoid involved_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol phosphate biosynthetic process involved_inIBACGD:CAL0000185409 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ip6k2Ratinositol phosphate biosynthetic process involved_inISOIp6k2 (Mus musculus)1624291MGI:5635272 PMID:24657168RGDPMID:24657168
Ip6k2Ratinositol phosphate biosynthetic process involved_inIEAUniProtKB:Q80V72 and ensembl:ENSMUSP000000820911600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol phosphate biosynthetic process involved_inIEAInterPro:IPR0055221600115GO_REF:0000002InterProGO_REF:0000002
Ip6k2Ratinositol phosphate metabolic process involved_inISSUniProtKB:Q9UHH91600115GO_REF:0000024UniProtGO_REF:0000024
Ip6k2Ratinositol phosphate metabolic process involved_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol phosphate metabolic process involved_inISOIP6K2 (Homo sapiens)1624291 PMID:30624931RGDPMID:30624931
Ip6k2Ratlipid metabolic process involved_inIEAUniProtKB-KW:KW-04431600115GO_REF:0000043UniProtGO_REF:0000043
Ip6k2Ratnegative regulation of cell growth involved_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnegative regulation of cell growth involved_inISOIP6K2 (Homo sapiens)1624291 PMID:11337497RGDPMID:11337497
Ip6k2Ratphosphate ion transport  IDA 633655 RGD 
Ip6k2Ratphosphatidylinositol metabolic process involved_inIEAUniPathway:UPA009491600115GO_REF:0000041UniProtGO_REF:0000041
Ip6k2Ratphosphatidylinositol phosphate biosynthetic process involved_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratphosphatidylinositol phosphate biosynthetic process involved_inIBAPANTHER:PTN000274018 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ip6k2Ratphosphatidylinositol phosphate biosynthetic process involved_inISOIP6K2 (Homo sapiens)1624291 PMID:10574768RGDPMID:10574768
Ip6k2Ratpositive regulation of apoptotic process involved_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratpositive regulation of apoptotic process involved_inISOIP6K2 (Homo sapiens)1624291 PMID:11337497RGDPMID:11337497
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Cellular Component
1 to 17 of 17 rows

  
Object Symbol
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Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
Ip6k2Ratcell junction located_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratcell junction located_inISOIP6K2 (Homo sapiens) and UniProtKB:Q9UHH9-11624291 RGDGO_REF:0000052
Ip6k2Ratcell junction located_inIEAUniProtKB:B2RCP4 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratcytoplasm is_active_inIBAFB:FBgn0032147 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ip6k2Ratfibrillar center located_inIEAUniProtKB:B2RCP4 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratfibrillar center located_inISOIP6K2 (Homo sapiens) and UniProtKB:Q9UHH9-11624291 RGDGO_REF:0000052
Ip6k2Ratfibrillar center located_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnucleoplasm located_inIEAUniProtKB:B2RCP4 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnucleoplasm located_inISOIP6K2 (Homo sapiens) and UniProtKB:Q9UHH9-11624291 RGDGO_REF:0000052
Ip6k2Ratnucleoplasm located_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnucleus located_inISOIP6K2 (Homo sapiens)1624291 PMID:11502751RGDPMID:11502751
Ip6k2Ratnucleus located_inIEAUniProtKB:Q80V72 and ensembl:ENSMUSP000000820911600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnucleus located_inIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Ip6k2Ratnucleus is_active_inIBAFB:FBgn0031267 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ip6k2Ratnucleus located_inISOIp6k2 (Mus musculus)1624291 PMID:11502751RGDPMID:11502751
Ip6k2Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
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Molecular Function
1 to 18 of 18 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ip6k2RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Ip6k2Ratflavonoid binding enablesISOIP6K2 (Homo sapiens)1624291 PMID:30624931RGDPMID:30624931
Ip6k2Ratflavonoid binding enablesIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratflavonoid binding enablesISSUniProtKB:Q9UHH91600115GO_REF:0000024UniProtGO_REF:0000024
Ip6k2Ratinositol hexakisphosphate 5-kinase activity enablesISOIP6K2 (Homo sapiens)1624291 PMID:30624931RGDPMID:30624931
Ip6k2Ratinositol hexakisphosphate 5-kinase activity enablesIEARHEA:127931600115GO_REF:0000116RHEAGO_REF:0000116
Ip6k2Ratinositol hexakisphosphate 5-kinase activity enablesIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol hexakisphosphate 5-kinase activity enablesISSUniProtKB:Q9UHH91600115GO_REF:0000024UniProtGO_REF:0000024
Ip6k2Ratinositol hexakisphosphate kinase activity enablesIBAMGI:1923750 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ip6k2Ratinositol hexakisphosphate kinase activity enablesIEAUniProtKB:Q9UHH9 and ensembl:ENSP000003311031600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol hexakisphosphate kinase activity enablesISOIp6k2 (Mus musculus)1624291MGI:5635272 PMID:24657168RGDPMID:24657168
Ip6k2Ratinositol hexakisphosphate kinase activity enablesIEAUniProtKB:Q80V72 and ensembl:ENSMUSP000000820911600115GO_REF:0000107EnsemblGO_REF:0000107
Ip6k2Ratinositol hexakisphosphate kinase activity enablesISOIP6K2 (Homo sapiens)1624291 PMID:10574768RGDPMID:10574768
Ip6k2Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Ip6k2Ratkinase activity enablesIEAInterPro:IPR0055221600115GO_REF:0000002InterProGO_REF:0000002
Ip6k2Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Ip6k2Ratprotein binding enablesISOIP6K2 (Homo sapiens)1624291UniProtKB:O60568 more ...RGDPMID:18195352 more ...
Ip6k2Rattransferase activity enablesIEAUniProtKB-KW:KW-08081600115GO_REF:0000043UniProtGO_REF:0000043
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#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Regulation of intestinal Na+-dependent phosphate co-transporters by a low-phosphate diet and 1,25-dihydroxyvitamin D3. Katai K, etal., Biochem J 1999 Nov 1;343 Pt 3:705-12.
3. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:10574768   PMID:11337497   PMID:11502751   PMID:12477932   PMID:30624931  



Ip6k2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88118,362,154 - 118,388,668 (+)NCBIGRCr8
mRatBN7.28109,483,843 - 109,510,172 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8109,484,310 - 109,510,166 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8115,103,519 - 115,127,769 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08113,302,698 - 113,326,948 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08111,145,495 - 111,169,746 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08117,574,136 - 117,599,849 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8117,574,161 - 117,599,848 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08116,921,132 - 116,944,750 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48113,836,756 - 113,861,895 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18113,870,909 - 113,881,351 (+)NCBI
Celera8108,780,684 - 108,804,293 (+)NCBICelera
Cytogenetic Map8q32NCBI
IP6K2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38348,688,003 - 48,717,221 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl348,688,003 - 48,740,353 (-)EnsemblGRCh38hg38GRCh38
GRCh37348,725,436 - 48,754,654 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36348,700,440 - 48,729,710 (-)NCBINCBI36Build 36hg18NCBI36
Build 34348,700,440 - 48,729,710NCBI
Celera348,681,373 - 48,710,646 (-)NCBICelera
Cytogenetic Map3p21.31NCBI
HuRef348,783,857 - 48,813,325 (-)NCBIHuRef
CHM1_1348,677,527 - 48,706,810 (-)NCBICHM1_1
T2T-CHM13v2.0348,716,988 - 48,746,201 (-)NCBIT2T-CHM13v2.0
Ip6k2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399108,660,928 - 108,683,532 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9108,660,995 - 108,683,536 (+)EnsemblGRCm39 Ensembl
GRCm389108,783,764 - 108,806,333 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9108,783,796 - 108,806,337 (+)EnsemblGRCm38mm10GRCm38
MGSCv379108,698,325 - 108,708,664 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369108,653,217 - 108,663,556 (+)NCBIMGSCv36mm8
Celera9108,403,128 - 108,413,468 (+)NCBICelera
Cytogenetic Map9F2NCBI
cM Map959.63NCBI
Ip6k2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955532766,577 - 794,409 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955532766,577 - 794,461 (-)NCBIChiLan1.0ChiLan1.0
IP6K2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2248,662,753 - 48,693,498 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1348,667,521 - 48,698,266 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0348,608,902 - 48,638,185 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1349,690,486 - 49,719,811 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl349,690,486 - 49,719,798 (-)Ensemblpanpan1.1panPan2
IP6K2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12040,403,260 - 40,437,863 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2040,427,083 - 40,437,804 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2040,320,579 - 40,355,092 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02040,888,751 - 40,923,377 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2040,888,832 - 40,923,377 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12040,126,293 - 40,160,881 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02040,530,369 - 40,565,188 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02040,812,078 - 40,846,684 (+)NCBIUU_Cfam_GSD_1.0
Ip6k2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560263,726,780 - 63,755,149 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936529486,879 - 515,674 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936529487,277 - 515,614 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IP6K2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1331,379,521 - 31,406,911 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11331,379,516 - 31,406,989 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21334,646,759 - 34,655,148 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IP6K2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12210,097,730 - 10,121,325 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2210,097,746 - 10,121,840 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041156,967,477 - 156,992,136 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ip6k2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247302,697,098 - 2,734,636 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247302,697,098 - 2,734,198 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Ip6k2
95 total Variants

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:47
Interacting mature miRNAs:56
Transcripts:ENSRNOT00000027584
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 22 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2303171Bp331Blood pressure QTL 3315.570.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)861290298119084929Rat
1549909Stresp11Stress response QTL 116.830.0019stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)873473045118473045Rat
631210Bw3Body weight QTL35.9mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)869349194112783834Rat
1358903Bp252Blood pressure QTL 25270.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)893965141123900184Rat
1554321Bmd3Bone mineral density QTL 37.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)840952565123900184Rat
9590292Uminl3Urine mineral level QTL 33.620.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)871888757116888757Rat
8694446Bw170Body weight QTL 17012.070.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)871888757116888757Rat
631650Stl6Serum triglyceride level QTL 640.0019blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)810378157112202585Rat
631653Bp125Blood pressure QTL 1253.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)866142385111142385Rat
1581557Eae16Experimental allergic encephalomyelitis QTL 163.8nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)88462195110921472Rat

1 to 10 of 22 rows
RH144690  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,497,031 - 109,497,247 (+)MAPPERmRatBN7.2
Rnor_6.08117,586,900 - 117,587,115NCBIRnor6.0
Rnor_5.08116,932,067 - 116,932,282UniSTSRnor5.0
RGSC_v3.48113,848,833 - 113,849,048UniSTSRGSC3.4
Celera8108,791,530 - 108,791,745UniSTS
RH 3.4 Map81115.3UniSTS
Cytogenetic Map8q32UniSTS
UniSTS:532317  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.28109,509,564 - 109,509,986 (+)MAPPERmRatBN7.2
Rnor_6.08117,599,243 - 117,599,664NCBIRnor6.0
Rnor_5.08116,944,144 - 116,944,565UniSTSRnor5.0
Celera8108,803,687 - 108,804,108UniSTS
Cytogenetic Map8q32UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000027584   ⟹   ENSRNOP00000027584
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,499,531 - 109,510,166 (+)Ensembl
Rnor_6.0 Ensembl8117,576,788 - 117,599,848 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077078   ⟹   ENSRNOP00000071056
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,484,310 - 109,510,166 (+)Ensembl
Rnor_6.0 Ensembl8117,574,161 - 117,599,843 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000099109   ⟹   ENSRNOP00000092455
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl8109,499,531 - 109,500,567 (+)Ensembl
RefSeq Acc Id: NM_021660   ⟹   NP_067692
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,364,677 - 118,388,668 (+)NCBI
mRatBN7.28109,486,179 - 109,510,172 (+)NCBI
Rnor_6.08117,576,048 - 117,599,849 (+)NCBI
Rnor_5.08116,921,132 - 116,944,750 (+)NCBI
RGSC_v3.48113,836,756 - 113,861,895 (+)RGD
Celera8108,780,684 - 108,804,293 (+)RGD
Sequence:
RefSeq Acc Id: XM_008766564   ⟹   XP_008764786
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,362,645 - 118,388,668 (+)NCBI
mRatBN7.28109,484,212 - 109,510,172 (+)NCBI
Rnor_6.08117,574,137 - 117,599,849 (+)NCBI
Sequence:
RefSeq Acc Id: XM_039082043   ⟹   XP_038937971
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,364,824 - 118,388,668 (+)NCBI
mRatBN7.28109,486,926 - 109,510,172 (+)NCBI
RefSeq Acc Id: XM_039082044   ⟹   XP_038937972
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,362,450 - 118,379,799 (+)NCBI
mRatBN7.28109,483,843 - 109,501,302 (+)NCBI
RefSeq Acc Id: XM_039082045   ⟹   XP_038937973
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,362,154 - 118,379,799 (+)NCBI
mRatBN7.28109,483,847 - 109,501,302 (+)NCBI
RefSeq Acc Id: XM_063266056   ⟹   XP_063122126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,363,096 - 118,388,668 (+)NCBI
RefSeq Acc Id: XM_063266057   ⟹   XP_063122127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,362,710 - 118,388,668 (+)NCBI
RefSeq Acc Id: XM_063266058   ⟹   XP_063122128
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr88118,378,110 - 118,388,668 (+)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: NP_067692   ⟸   NM_021660
- UniProtKB: Q5XIU6 (UniProtKB/Swiss-Prot),   Q9R0U1 (UniProtKB/Swiss-Prot),   A6I382 (UniProtKB/TrEMBL),   A0A8L2UKG6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008764786   ⟸   XM_008766564
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSRNOP00000071056   ⟸   ENSRNOT00000077078
Ensembl Acc Id: ENSRNOP00000027584   ⟸   ENSRNOT00000027584
RefSeq Acc Id: XP_038937972   ⟸   XM_039082044
- Peptide Label: isoform X2

Name Modeler Protein Id AA Range Protein Structure
AF-Q9R0U1-F1-model_v2 AlphaFold Q9R0U1 1-425 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13696324
Promoter ID:EPDNEW_R6840
Type:initiation region
Name:Ip6k2_1
Description:inositol hexakisphosphate kinase 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.08117,574,173 - 117,574,233EPDNEW


1 to 28 of 28 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-29116 BioCyc
BioCyc Pathway PWY-6369 [inositol diphosphates biosynthesis] BioCyc
BioCyc Pathway Image PWY-6369 BioCyc
Ensembl Genes ENSRNOG00000020361 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000027584 ENTREZGENE
  ENSRNOT00000077078 ENTREZGENE
  ENSRNOT00000077078.2 UniProtKB/Swiss-Prot
Gene3D-CATH 3.30.470.160 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7112777 IMAGE-MGC_LOAD
InterPro IPK UniProtKB/Swiss-Prot
  IPK_sf UniProtKB/Swiss-Prot
KEGG Report rno:59268 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93905 IMAGE-MGC_LOAD
NCBI Gene 59268 ENTREZGENE
PANTHER INOSITOL HEXAKISPHOSPHATE KINASE 2 UniProtKB/Swiss-Prot
  PTHR12400 UniProtKB/Swiss-Prot
Pfam IPK UniProtKB/Swiss-Prot
PhenoGen Ip6k2 PhenoGen
RatGTEx ENSRNOG00000020361 RatGTEx
Superfamily-SCOP SAICAR synthase-like UniProtKB/Swiss-Prot
UniProt A0A8I6AHJ9_RAT UniProtKB/TrEMBL
  A0A8L2UKG6 ENTREZGENE, UniProtKB/TrEMBL
  A6I382 ENTREZGENE, UniProtKB/TrEMBL
  A6I383 ENTREZGENE, UniProtKB/TrEMBL
  IP6K2_RAT UniProtKB/Swiss-Prot
  Q5XIU6 ENTREZGENE
  Q9R0U1 ENTREZGENE
UniProt Secondary Q5XIU6 UniProtKB/Swiss-Prot
1 to 28 of 28 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2009-02-26 Ip6k2  inositol hexakisphosphate kinase 2  Ihpk2  inositol hexaphosphate kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ihpk2  inositol hexaphosphate kinase 2  Pius  PiUS protein  Symbol and Name updated 1299863 APPROVED
2002-08-07 Pius  PiUS protein      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_protein 424 amino acids; 51 kDa 633655