Symbol:
Susd3
Name:
sushi domain containing 3
RGD ID:
1310933
Description:
Predicted to be active in plasma membrane. Orthologous to human SUSD3 (sushi domain containing 3); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; alpha-Zearalanol.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
LOC306810; sushi domain-containing protein 3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 15,607,259 - 15,623,322 (+) NCBI GRCr8 mRatBN7.2 17 15,400,845 - 15,417,851 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 15,400,845 - 15,417,044 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 15,287,857 - 15,304,102 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 16,892,916 - 16,909,158 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 15,214,636 - 15,230,877 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 15,814,132 - 15,830,328 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 15,814,132 - 15,830,328 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 17,878,841 - 17,895,037 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 21,359,497 - 21,375,693 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 17 21,359,021 - 21,375,679 (+) NCBI Celera 17 15,131,176 - 15,147,372 (+) NCBI Celera Cytogenetic Map 17 p14 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Susd3 Rat 1,1-dichloroethene decreases expression ISO Susd3 (Mus musculus) 6480464 vinylidene chloride results in decreased expression of SUSD3 mRNA CTD PMID:26682919 Susd3 Rat 1,2-dimethylhydrazine increases expression ISO Susd3 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in increased expression of SUSD3 mRNA CTD PMID:22206623 Susd3 Rat 17alpha-ethynylestradiol increases expression EXP 6480464 Ethinyl Estradiol results in increased expression of SUSD3 mRNA CTD PMID:17557909 Susd3 Rat 17beta-estradiol decreases expression ISO SUSD3 (Homo sapiens) 6480464 Estradiol results in decreased expression of SUSD3 mRNA CTD PMID:20106945 Susd3 Rat 17beta-estradiol increases expression ISO SUSD3 (Homo sapiens) 6480464 Estradiol results in increased expression of SUSD3 mRNA CTD PMID:21185374 Susd3 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression ISO SUSD3 (Homo sapiens) 6480464 Tetrachlorodibenzodioxin results in decreased expression of SUSD3 mRNA CTD PMID:20106945 and PMID:26238291 Susd3 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of SUSD3 mRNA CTD PMID:33387578 and PMID:34747641 Susd3 Rat 4-hydroxyphenyl retinamide decreases expression ISO Susd3 (Mus musculus) 6480464 Fenretinide results in decreased expression of SUSD3 mRNA CTD PMID:28973697 Susd3 Rat 4-hydroxyphenyl retinamide increases expression ISO Susd3 (Mus musculus) 6480464 Fenretinide results in increased expression of SUSD3 mRNA CTD PMID:28973697 Susd3 Rat aflatoxin B1 affects expression ISO SUSD3 (Homo sapiens) 6480464 Aflatoxin B1 affects the expression of SUSD3 protein CTD PMID:20106945 Susd3 Rat aflatoxin B1 decreases expression ISO SUSD3 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of SUSD3 mRNA CTD PMID:22100608 Susd3 Rat all-trans-retinoic acid increases expression ISO SUSD3 (Homo sapiens) 6480464 Tretinoin results in increased expression of SUSD3 mRNA CTD PMID:33167477 Susd3 Rat alpha-Zearalanol increases expression EXP 6480464 Zeranol results in increased expression of SUSD3 mRNA CTD PMID:35163327 Susd3 Rat amphetamine increases expression EXP 6480464 Amphetamine results in increased expression of SUSD3 mRNA CTD PMID:30779732 Susd3 Rat atrazine affects methylation EXP 6480464 Atrazine affects the methylation of SUSD3 gene CTD PMID:28931070 Susd3 Rat benzo[a]pyrene decreases expression ISO SUSD3 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of SUSD3 mRNA CTD PMID:20106945 more ... Susd3 Rat benzo[a]pyrene increases methylation ISO SUSD3 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of SUSD3 promoter CTD PMID:27901495 Susd3 Rat bis(2-ethylhexyl) phthalate decreases expression ISO Susd3 (Mus musculus) 6480464 Diethylhexyl Phthalate results in decreased expression of SUSD3 mRNA CTD PMID:34319233 Susd3 Rat bis(2-ethylhexyl) phthalate increases expression ISO Susd3 (Mus musculus) 6480464 Diethylhexyl Phthalate results in increased expression of SUSD3 mRNA CTD PMID:33754040 Susd3 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of SUSD3 mRNA CTD PMID:25181051 and PMID:32145629 Susd3 Rat bisphenol A increases expression ISO Susd3 (Mus musculus) 6480464 bisphenol A results in increased expression of SUSD3 mRNA CTD PMID:38074096 Susd3 Rat bisphenol A decreases expression ISO Susd3 (Mus musculus) 6480464 bisphenol A results in decreased expression of SUSD3 mRNA CTD PMID:30245210 Susd3 Rat buta-1,3-diene decreases expression ISO Susd3 (Mus musculus) 6480464 1 and 3-butadiene results in decreased expression of SUSD3 mRNA CTD PMID:29038090 Susd3 Rat butanal increases expression ISO SUSD3 (Homo sapiens) 6480464 butyraldehyde results in increased expression of SUSD3 mRNA CTD PMID:26079696 Susd3 Rat cadmium atom multiple interactions ISO Susd3 (Mus musculus) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of SUSD3 mRNA CTD PMID:37325564 Susd3 Rat cadmium dichloride decreases methylation EXP 6480464 Cadmium Chloride results in decreased methylation of SUSD3 promoter CTD PMID:22457795 Susd3 Rat cadmium dichloride multiple interactions ISO Susd3 (Mus musculus) 6480464 [Cadmium Chloride results in increased abundance of Cadmium] which results in increased expression of SUSD3 mRNA CTD PMID:37325564 Susd3 Rat cadmium dichloride decreases expression ISO SUSD3 (Homo sapiens) 6480464 Cadmium Chloride results in decreased expression of SUSD3 mRNA CTD PMID:38382870 Susd3 Rat calcitriol increases expression ISO SUSD3 (Homo sapiens) 6480464 Calcitriol results in increased expression of SUSD3 mRNA CTD PMID:26485663 Susd3 Rat chlorpyrifos increases expression ISO Susd3 (Mus musculus) 6480464 Chlorpyrifos results in increased expression of SUSD3 mRNA CTD PMID:37019170 Susd3 Rat choline multiple interactions ISO Susd3 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of SUSD3 mRNA CTD PMID:20938992 Susd3 Rat copper atom increases expression EXP 6480464 Copper deficiency results in increased expression of SUSD3 mRNA CTD PMID:26033743 Susd3 Rat copper atom multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in decreased expression of SUSD3 mRNA CTD PMID:20971185 Susd3 Rat copper(0) increases expression EXP 6480464 Copper deficiency results in increased expression of SUSD3 mRNA CTD PMID:26033743 Susd3 Rat copper(0) multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in decreased expression of SUSD3 mRNA CTD PMID:20971185 Susd3 Rat copper(II) sulfate decreases expression ISO SUSD3 (Homo sapiens) 6480464 Copper Sulfate results in decreased expression of SUSD3 mRNA CTD PMID:19549813 Susd3 Rat cyclosporin A decreases expression ISO SUSD3 (Homo sapiens) 6480464 Cyclosporine results in decreased expression of SUSD3 mRNA CTD PMID:20106945 Susd3 Rat Dibutyl phosphate affects expression ISO SUSD3 (Homo sapiens) 6480464 di-n-butylphosphoric acid affects the expression of SUSD3 mRNA CTD PMID:37042841 Susd3 Rat dibutyl phthalate decreases expression EXP 6480464 Dibutyl Phthalate results in decreased expression of SUSD3 mRNA CTD PMID:21266533 Susd3 Rat dibutyl phthalate decreases expression ISO Susd3 (Mus musculus) 6480464 Dibutyl Phthalate results in decreased expression of SUSD3 mRNA CTD PMID:17361019 and PMID:21266533 Susd3 Rat dimethylarsinic acid multiple interactions ISO Susd3 (Mus musculus) 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of SUSD3 mRNA CTD PMID:34876320 Susd3 Rat diquat increases expression ISO Susd3 (Mus musculus) 6480464 Diquat results in increased expression of SUSD3 mRNA CTD PMID:36851058 Susd3 Rat dorsomorphin multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Susd3 Rat entinostat multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SUSD3 mRNA CTD PMID:27188386 Susd3 Rat entinostat increases expression ISO SUSD3 (Homo sapiens) 6480464 entinostat results in increased expression of SUSD3 mRNA CTD PMID:26272509 and PMID:27188386 Susd3 Rat folic acid multiple interactions ISO Susd3 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of SUSD3 mRNA CTD PMID:20938992 Susd3 Rat formaldehyde decreases expression ISO SUSD3 (Homo sapiens) 6480464 Formaldehyde results in decreased expression of SUSD3 mRNA CTD PMID:23649840 Susd3 Rat furan decreases methylation EXP 6480464 furan results in decreased methylation of SUSD3 gene CTD PMID:27387713 Susd3 Rat furan increases expression EXP 6480464 furan results in increased expression of SUSD3 mRNA CTD PMID:27387713 Susd3 Rat genistein increases expression ISO SUSD3 (Homo sapiens) 6480464 Genistein results in increased expression of SUSD3 mRNA CTD PMID:20884965 Susd3 Rat genistein increases expression ISO Susd3 (Mus musculus) 6480464 Genistein results in increased expression of SUSD3 mRNA CTD PMID:32186404 Susd3 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of SUSD3 mRNA CTD PMID:33387578 Susd3 Rat GW 4064 increases expression ISO Susd3 (Mus musculus) 6480464 GW 4064 results in increased expression of SUSD3 mRNA CTD PMID:26655953 Susd3 Rat L-methionine multiple interactions ISO Susd3 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in increased expression of SUSD3 mRNA CTD PMID:20938992 Susd3 Rat lipopolysaccharide decreases expression ISO SUSD3 (Homo sapiens) 6480464 Lipopolysaccharides results in decreased expression of SUSD3 mRNA CTD PMID:35811015 Susd3 Rat lipopolysaccharide multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [S-(1 more ... CTD PMID:35811015 Susd3 Rat methyl methanesulfonate decreases expression ISO SUSD3 (Homo sapiens) 6480464 Methyl Methanesulfonate results in decreased expression of SUSD3 mRNA CTD PMID:23649840 Susd3 Rat methylarsonic acid multiple interactions ISO Susd3 (Mus musculus) 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of SUSD3 mRNA CTD PMID:34876320 Susd3 Rat methylparaben decreases expression ISO SUSD3 (Homo sapiens) 6480464 methylparaben results in decreased expression of SUSD3 mRNA CTD PMID:17121429 Susd3 Rat mono(2-ethylhexyl) phthalate decreases expression EXP 6480464 mono-(2-ethylhexyl)phthalate results in decreased expression of SUSD3 mRNA CTD PMID:16809437 Susd3 Rat mono(2-ethylhexyl) phthalate increases expression EXP 6480464 mono-(2-ethylhexyl)phthalate results in increased expression of SUSD3 mRNA CTD PMID:16809437 Susd3 Rat nickel atom increases expression ISO SUSD3 (Homo sapiens) 6480464 Nickel results in increased expression of SUSD3 mRNA CTD PMID:24768652 and PMID:25583101 Susd3 Rat nitrates multiple interactions ISO Susd3 (Mus musculus) 6480464 [Particulate Matter results in increased abundance of Nitrates] which results in increased expression of SUSD3 mRNA CTD PMID:35964746 Susd3 Rat O-methyleugenol decreases expression ISO SUSD3 (Homo sapiens) 6480464 methyleugenol results in decreased expression of SUSD3 mRNA CTD PMID:32234424 Susd3 Rat panobinostat multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SUSD3 mRNA CTD PMID:27188386 Susd3 Rat panobinostat increases expression ISO SUSD3 (Homo sapiens) 6480464 panobinostat results in increased expression of SUSD3 mRNA CTD PMID:26272509 Susd3 Rat paracetamol affects expression ISO Susd3 (Mus musculus) 6480464 Acetaminophen affects the expression of SUSD3 mRNA CTD PMID:17562736 Susd3 Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of SUSD3 mRNA CTD PMID:33387578 Susd3 Rat paracetamol decreases expression ISO SUSD3 (Homo sapiens) 6480464 Acetaminophen results in decreased expression of SUSD3 mRNA CTD PMID:22230336 and PMID:29067470 Susd3 Rat pentanal increases expression ISO SUSD3 (Homo sapiens) 6480464 pentanal results in increased expression of SUSD3 mRNA CTD PMID:26079696 Susd3 Rat perfluorohexanesulfonic acid increases expression ISO Susd3 (Mus musculus) 6480464 perfluorohexanesulfonic acid results in increased expression of SUSD3 mRNA CTD PMID:37995155 Susd3 Rat pirinixic acid multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of SUSD3 mRNA CTD PMID:19710929 Susd3 Rat quercetin decreases expression ISO SUSD3 (Homo sapiens) 6480464 Quercetin results in decreased expression of SUSD3 mRNA CTD PMID:21632981 Susd3 Rat S-(1,2-dichlorovinyl)-L-cysteine multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [S-(1 more ... CTD PMID:35811015 Susd3 Rat SB 431542 multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Susd3 Rat sevoflurane affects expression EXP 6480464 sevoflurane affects the expression of SUSD3 mRNA CTD PMID:15967596 Susd3 Rat sodium arsenate multiple interactions ISO Susd3 (Mus musculus) 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of SUSD3 mRNA CTD PMID:34876320 Susd3 Rat sodium arsenite decreases expression ISO SUSD3 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of SUSD3 mRNA CTD PMID:29301061 Susd3 Rat sodium arsenite increases expression ISO Susd3 (Mus musculus) 6480464 sodium arsenite results in increased expression of SUSD3 mRNA CTD PMID:37682722 Susd3 Rat sodium arsenite multiple interactions ISO Susd3 (Mus musculus) 6480464 [sodium arsenate co-treated with sodium arsenite co-treated with monomethylarsonic acid co-treated with Cacodylic Acid] results in increased expression of SUSD3 mRNA CTD PMID:34876320 Susd3 Rat titanium dioxide increases expression EXP 6480464 titanium dioxide results in increased expression of SUSD3 mRNA CTD PMID:30012374 Susd3 Rat titanium dioxide increases methylation ISO Susd3 (Mus musculus) 6480464 titanium dioxide results in increased methylation of SUSD3 gene CTD PMID:35295148 Susd3 Rat trichloroethene increases methylation EXP 6480464 Trichloroethylene results in increased methylation of SUSD3 gene CTD PMID:27618143 Susd3 Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of SUSD3 mRNA CTD PMID:33387578 Susd3 Rat trichostatin A increases expression ISO SUSD3 (Homo sapiens) 6480464 trichostatin A results in increased expression of SUSD3 mRNA CTD PMID:24935251 Susd3 Rat valproic acid increases expression ISO Susd3 (Mus musculus) 6480464 Valproic Acid results in increased expression of SUSD3 mRNA CTD PMID:19136453 Susd3 Rat valproic acid multiple interactions ISO SUSD3 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SUSD3 mRNA CTD PMID:27188386 Susd3 Rat valproic acid increases expression ISO SUSD3 (Homo sapiens) 6480464 Valproic Acid results in increased expression of SUSD3 mRNA CTD PMID:23179753 more ... Susd3 Rat valproic acid affects expression ISO SUSD3 (Homo sapiens) 6480464 Valproic Acid affects the expression of SUSD3 mRNA CTD PMID:25979313 Susd3 Rat valproic acid increases methylation ISO SUSD3 (Homo sapiens) 6480464 Valproic Acid results in increased methylation of SUSD3 gene CTD PMID:29154799 Susd3 Rat vinclozolin increases expression EXP 6480464 vinclozolin results in increased expression of SUSD3 mRNA CTD PMID:20566332
1,1-dichloroethene (ISO) 1,2-dimethylhydrazine (ISO) 17alpha-ethynylestradiol (EXP) 17beta-estradiol (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 4-hydroxyphenyl retinamide (ISO) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) alpha-Zearalanol (EXP) amphetamine (EXP) atrazine (EXP) benzo[a]pyrene (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) buta-1,3-diene (ISO) butanal (ISO) cadmium atom (ISO) cadmium dichloride (EXP,ISO) calcitriol (ISO) chlorpyrifos (ISO) choline (ISO) copper atom (EXP,ISO) copper(0) (EXP,ISO) copper(II) sulfate (ISO) cyclosporin A (ISO) Dibutyl phosphate (ISO) dibutyl phthalate (EXP,ISO) dimethylarsinic acid (ISO) diquat (ISO) dorsomorphin (ISO) entinostat (ISO) folic acid (ISO) formaldehyde (ISO) furan (EXP) genistein (ISO) gentamycin (EXP) GW 4064 (ISO) L-methionine (ISO) lipopolysaccharide (ISO) methyl methanesulfonate (ISO) methylarsonic acid (ISO) methylparaben (ISO) mono(2-ethylhexyl) phthalate (EXP) nickel atom (ISO) nitrates (ISO) O-methyleugenol (ISO) panobinostat (ISO) paracetamol (EXP,ISO) pentanal (ISO) perfluorohexanesulfonic acid (ISO) pirinixic acid (ISO) quercetin (ISO) S-(1,2-dichlorovinyl)-L-cysteine (ISO) SB 431542 (ISO) sevoflurane (EXP) sodium arsenate (ISO) sodium arsenite (ISO) titanium dioxide (EXP,ISO) trichloroethene (EXP) trichostatin A (ISO) valproic acid (ISO) vinclozolin (EXP)
Susd3 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 17 15,607,259 - 15,623,322 (+) NCBI GRCr8 mRatBN7.2 17 15,400,845 - 15,417,851 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 17 15,400,845 - 15,417,044 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 17 15,287,857 - 15,304,102 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 17 16,892,916 - 16,909,158 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 17 15,214,636 - 15,230,877 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 17 15,814,132 - 15,830,328 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 17 15,814,132 - 15,830,328 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 17 17,878,841 - 17,895,037 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 17 21,359,497 - 21,375,693 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 17 21,359,021 - 21,375,679 (+) NCBI Celera 17 15,131,176 - 15,147,372 (+) NCBI Celera Cytogenetic Map 17 p14 NCBI
SUSD3 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 9 93,058,701 - 93,085,133 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 9 93,058,688 - 93,085,133 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 9 95,820,983 - 95,847,415 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 9 94,860,810 - 94,887,236 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 9 92,900,543 - 92,926,969 NCBI Celera 9 66,262,735 - 66,289,161 (+) NCBI Celera Cytogenetic Map 9 q22.31 NCBI HuRef 9 65,497,947 - 65,524,291 (+) NCBI HuRef CHM1_1 9 95,967,649 - 95,994,079 (+) NCBI CHM1_1 T2T-CHM13v2.0 9 105,225,370 - 105,251,803 (+) NCBI T2T-CHM13v2.0
Susd3 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 13 49,378,993 - 49,402,197 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 13 49,384,166 - 49,402,182 (-) Ensembl GRCm39 Ensembl GRCm38 13 49,230,511 - 49,248,706 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 13 49,230,690 - 49,248,706 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 13 49,326,202 - 49,343,532 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 13 49,242,770 - 49,260,100 (-) NCBI MGSCv36 mm8 Celera 13 50,320,993 - 50,338,373 (-) NCBI Celera Cytogenetic Map 13 A5 NCBI cM Map 13 25.16 NCBI
Susd3 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955515 4,929,843 - 4,949,404 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955515 4,929,803 - 4,949,374 (-) NCBI ChiLan1.0 ChiLan1.0
SUSD3 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 11 46,342,737 - 46,369,135 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 9 46,345,121 - 46,371,510 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 9 64,182,304 - 64,208,703 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 9 92,249,042 - 92,275,305 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 9 92,249,042 - 92,275,305 (+) Ensembl panpan1.1 panPan2
SUSD3 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 1 98,599,938 - 98,613,635 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 1 98,600,353 - 98,613,664 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 1 98,993,964 - 99,008,338 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 1 99,216,894 - 99,231,265 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 1 99,217,309 - 99,231,248 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 1 98,830,085 - 98,844,450 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 1 98,565,430 - 98,579,791 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 1 99,321,040 - 99,335,409 (-) NCBI UU_Cfam_GSD_1.0
Susd3 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024404944 8,222,556 - 8,242,697 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936487 2,439,005 - 2,460,213 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936487 2,439,052 - 2,458,838 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SUSD3
SUSD3 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 12 103,446,404 - 103,472,885 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 12 103,446,467 - 103,472,498 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666038 91,721,017 - 91,747,167 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Susd3
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Predicted Target Of
Count of predictions: 153 Count of miRNA genes: 116 Interacting mature miRNAs: 131 Transcripts: ENSRNOT00000032997 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
1354581 Bp247 Blood pressure QTL 247 4.5 arterial blood pressure trait (VT:2000000) pulse pressure (CMO:0000292) 17 1 69599340 Rat 2300002 Iddm36 Insulin dependent diabetes mellitus QTL 36 1.98 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 17 9991286 40540197 Rat 631499 Stl1 Serum triglyceride level QTL 1 3.6 blood triglyceride amount (VT:0002644) blood triglyceride level (CMO:0000118) 17 3271398 27389946 Rat 2293664 Bmd28 Bone mineral density QTL 28 5.1 0.0001 femur mineral mass (VT:0010011) trabecular volumetric bone mineral density (CMO:0001729) 17 4354487 27028127 Rat 1300123 Bp194 Blood pressure QTL 194 2.82 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 17 2115149 34551001 Rat 1582224 Epfw4 Epididymal fat weight QTL 4 3.5 0.0058 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 17 9201365 23653323 Rat 1582225 Bw67 Body weight QTL 67 6.2 0.0001 body mass (VT:0001259) body weight (CMO:0000012) 17 9201365 23653323 Rat 1582226 Bw64 Body weight QTL 64 4.2 0.0017 body mass (VT:0001259) body weight (CMO:0000012) 17 9201365 23653323 Rat 1354651 Lmblg2 Limb length QTL 2 6 tibia length (VT:0004357) tibia length (CMO:0000450) 17 4299130 69599340 Rat 10401807 Kidm52 Kidney mass QTL 52 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 17 1 31701463 Rat 10054088 Scort28 Serum corticosterone level QTL 28 2.04 0.0102 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 17 4528038 49528038 Rat 1354630 Cm34 Cardiac mass QTL 34 8.7 heart left ventricle mass (VT:0007031) heart left ventricle wet weight (CMO:0000071) 17 4299130 69599340 Rat 1582208 Kidm32 Kidney mass QTL 32 3.9 0.0018 kidney mass (VT:0002707) both kidneys wet weight (CMO:0000085) 17 9201365 23653323 Rat 1354638 Insul1 Insulin level QTL 1 4.8 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 17 4299130 69599340 Rat 1549900 Iddm20 Insulin dependent diabetes mellitus QTL 20 3.7 pancreas integrity trait (VT:0010560) percentage of study population developing diabetes mellitus during a period of time (CMO:0001114) 17 13986773 21975515 Rat 1331720 Rf43 Renal function QTL 43 2.881 kidney blood vessel physiology trait (VT:0100012) absolute change in renal vascular resistance (CMO:0001900) 17 15330613 23017269 Rat 1354613 Kidm14 Kidney mass QTL 14 6.2 kidney mass (VT:0002707) left kidney wet weight (CMO:0000083) 17 4299130 35837242 Rat 1331765 Hrtrt15 Heart rate QTL 15 4.094 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 17 15330613 55836425 Rat 2324619 Coatc4 Coat color QTL 4 0.001 coat/hair pigmentation trait (VT:0010463) pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811) 17 4299130 21293263 Rat 2303627 Vencon8 Ventilatory control QTL 8 0.001 respiration trait (VT:0001943) tidal volume (CMO:0000222) 17 4528038 49528038 Rat 70184 BpQTLcluster14 Blood pressure QTL cluster 14 3.38 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 17 1 31990913 Rat 1581553 Pur14 Proteinuria QTL 14 5.3 0.0001 urine total protein amount (VT:0000032) urine protein excretion rate (CMO:0000759) 17 7979968 16317111 Rat 2303561 Bw91 Body weight QTL 91 2 body mass (VT:0001259) body weight (CMO:0000012) 17 8868462 53868462 Rat 1582258 Bw76 Body weight QTL 76 4.6 0.0005 body mass (VT:0001259) body weight (CMO:0000012) 17 9201365 23653323 Rat 631207 Niddm41 Non-insulin dependent diabetes mellitus QTL 41 blood glucose amount (VT:0000188) plasma glucose level (CMO:0000042) 17 1 37830672 Rat 1582199 Insul5 Insulin level QTL 5 3.4 0.0119 blood insulin amount (VT:0001560) calculated serum insulin level (CMO:0000359) 17 9201365 23653323 Rat 1354596 Bw32 Body weight QTL 32 4.5 body mass (VT:0001259) body weight (CMO:0000012) 17 4299130 60781592 Rat 1354662 Rf49 Renal function QTL 49 2.9 blood creatinine amount (VT:0005328) plasma creatinine level (CMO:0000537) 17 1 69599340 Rat 2293648 Bmd31 Bone mineral density QTL 31 4.5 0.0001 femur size trait (VT:1000369) femoral neck cortical cross-sectional area (CMO:0001702) 17 4354487 27028127 Rat 1354658 Spl8 Serum phospholipid level QTL 8 3.8 blood VLDL phospholipid amount (VT:0010507) blood very low density lipoprotein phospholipid level (CMO:0001571) 17 1 60781592 Rat 1641902 Colcr7 Colorectal carcinoma resistance QTL 7 3.35 0.0044 intestine integrity trait (VT:0010554) benign colorectal tumor surface area measurement (CMO:0001799) 17 2115149 21881669 Rat 1582241 Bw70 Body weight QTL 70 4.6 0.0003 body mass (VT:0001259) body weight (CMO:0000012) 17 9201365 23653323 Rat 1582245 Bw73 Body weight QTL 73 4.6 0.0004 body mass (VT:0001259) body weight (CMO:0000012) 17 9201365 23653323 Rat 9590316 Scort21 Serum corticosterone level QTL 21 4.75 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 17 1 22871563 Rat
RH127884
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 17 15,416,647 - 15,416,827 (+) MAPPER mRatBN7.2 Rnor_6.0 17 15,829,932 - 15,830,111 NCBI Rnor6.0 Rnor_5.0 17 17,894,641 - 17,894,820 UniSTS Rnor5.0 RGSC_v3.4 17 21,375,297 - 21,375,476 UniSTS RGSC3.4 Celera 17 15,146,976 - 15,147,155 UniSTS RH 3.4 Map 17 176.4 UniSTS Cytogenetic Map 17 p14 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
60
31
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Ensembl Acc Id:
ENSRNOT00000032997 ⟹ ENSRNOP00000031097
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 17 15,400,845 - 15,417,044 (+) Ensembl Rnor_6.0 Ensembl 17 15,814,132 - 15,830,328 (+) Ensembl
Ensembl Acc Id:
ENSRNOT00000105376 ⟹ ENSRNOP00000081141
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 17 15,405,874 - 15,416,911 (+) Ensembl
RefSeq Acc Id:
NM_001107341 ⟹ NP_001100811
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 15,607,259 - 15,623,322 (+) NCBI mRatBN7.2 17 15,400,845 - 15,417,044 (+) NCBI Rnor_6.0 17 15,814,132 - 15,830,328 (+) NCBI Rnor_5.0 17 17,878,841 - 17,895,037 (+) NCBI RGSC_v3.4 17 21,359,497 - 21,375,693 (+) RGD Celera 17 15,131,176 - 15,147,372 (+) RGD
Sequence:
AGGCTCCACTGACCACTGCAGAGCACTCAGGATGCGCCGAGTGTCTGGGACCCTTCGGGGCCGGGCGAGGCCCCGGGGGCGTGCAGGGAACACAACGCCGCCAGTCCCAGGAAACCAGACAGGCACAT
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RefSeq Acc Id:
XM_006253709 ⟹ XP_006253771
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 17 15,607,597 - 15,623,319 (+) NCBI mRatBN7.2 17 15,401,191 - 15,417,851 (+) NCBI Rnor_6.0 17 15,817,617 - 15,830,201 (+) NCBI Rnor_5.0 17 17,878,841 - 17,895,037 (+) NCBI
Sequence:
CTTAACTCAGAGATCCACCTGCCTCTGCCTCTCTGGCAGTTGTGTGCCTGGAAGAGGTCTCCATGTGTGGCTCACAACGACCTTGAACTCACTATCTTGTTTCACCCTCCTGAGTATCTGCGCCGGTA
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RefSeq Acc Id:
NP_001100811 ⟸ NM_001107341
- UniProtKB:
D3Z8I2 (UniProtKB/TrEMBL), A6J6X1 (UniProtKB/TrEMBL)
- Sequence:
MRRVSGTLRGRARPRGRAGNTTPPVPGNQTGTCAQLHPPPKGTLQVVRGDGTSLGTVLIFHCPSGHQMVGSGLLTCAWNGSTADWSSGSPVCKAVPPHETFGFKVAVIASIVSCAIILLMSMAFLTCC
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RefSeq Acc Id:
XP_006253771 ⟸ XM_006253709
- Peptide Label:
isoform X1
- UniProtKB:
A0A8I5ZSB4 (UniProtKB/TrEMBL), A6J6X3 (UniProtKB/TrEMBL)
- Sequence:
MKQTQGTCAQLHPPPKGTLQVVRGDGTSLGTVLIFHCPSGHQMVGSGLLTCAWNGSTADWSSGS
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Ensembl Acc Id:
ENSRNOP00000031097 ⟸ ENSRNOT00000032997
Ensembl Acc Id:
ENSRNOP00000081141 ⟸ ENSRNOT00000105376
RGD ID: 13700355 Promoter ID: EPDNEW_R10879 Type: multiple initiation site Name: Susd3_1 Description: sushi domain containing 3 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 17 15,814,132 - 15,814,192 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2008-04-30
Susd3
sushi domain containing 3
Susd3_predicted
sushi domain containing 3 (predicted)
'predicted' is removed
2292626 APPROVED
2005-01-12
Susd3_predicted
sushi domain containing 3 (predicted)
Symbol and Name status set to approved
70820 APPROVED
