Arglu1 (arginine and glutamate rich 1) - Rat Genome Database

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Gene: Arglu1 (arginine and glutamate rich 1) Rattus norvegicus
Analyze
Symbol: Arglu1
Name: arginine and glutamate rich 1
RGD ID: 1310061
Description: Predicted to enable pre-mRNA binding activity and transcription coactivator activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Predicted to be located in cytosol and nuclear speck. Predicted to be active in mitochondrion and nucleoplasm. Orthologous to human ARGLU1 (arginine and glutamate rich 1); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: arginine and glutamate-rich protein 1; LOC290912; MGC109359; MGC156517; RGD1310061; similar to hypothetical protein FLJ10154
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81687,455,097 - 87,479,148 (+)NCBIGRCr8
mRatBN7.21680,753,300 - 80,777,350 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1680,753,315 - 80,777,349 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1686,032,336 - 86,056,378 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01689,484,947 - 89,508,989 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01684,729,373 - 84,753,409 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01686,600,877 - 86,625,084 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1686,600,877 - 86,625,083 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01686,014,418 - 86,038,237 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41686,143,399 - 86,181,601 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11686,129,438 - 86,167,640 (+)NCBI
Celera1678,531,608 - 78,555,458 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arglu1RatAnal Atresia, Hypospadias, and Penoscrotal Inversion  ISOARGLU1 (Homo sapiens)8554872ClinVar Annotator: match by term: Anal atresia more ...ClinVarPMID:31690835

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arglu1Rat(+)-catechin multiple interactionsISOARGLU1 (Homo sapiens)6480464[Catechin co-treated with Grape Seed Proanthocyanidins] results in decreased expression of ARGLU1 mRNACTDPMID:24763279
Arglu1Rat(+)-schisandrin B multiple interactionsEXP 6480464schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of ARGLU1 mRNA]CTDPMID:31150632
Arglu1Rat(-)-demecolcine decreases expressionISOARGLU1 (Homo sapiens)6480464Demecolcine results in decreased expression of ARGLU1 mRNACTDPMID:23649840
Arglu1Rat(1->4)-beta-D-glucan multiple interactionsISOArglu1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in decreased expression of ARGLU1 mRNACTDPMID:36331819
Arglu1Rat(S)-nicotine increases expressionISOARGLU1 (Homo sapiens)6480464Nicotine results in increased expression of ARGLU1 mRNACTDPMID:16949557
Arglu1Rat1,2-dimethylhydrazine multiple interactionsISOArglu1 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of ARGLU1 mRNA]CTDPMID:22206623
Arglu1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOArglu1 (Mus musculus)6480464Tetrachlorodibenzodioxin promotes the reaction [AHR protein binds to ARGLU1 promoter]CTDPMID:19654925
Arglu1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of ARGLU1 mRNACTDPMID:33387578
Arglu1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of ARGLU1 mRNACTDPMID:34747641
Arglu1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOArglu1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of ARGLU1 mRNACTDPMID:21570461 and PMID:24680724
Arglu1Rat3,4-methylenedioxymethamphetamine increases expressionISOArglu1 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of ARGLU1 mRNACTDPMID:20188158
Arglu1Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOARGLU1 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of ARGLU1 mRNA and [INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of ARGLU1 mRNACTDPMID:28628672
Arglu1Rat4,4'-sulfonyldiphenol multiple interactionsISOARGLU1 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol S] results in decreased expression of ARGLU1 mRNACTDPMID:28628672
Arglu1Rat4,4'-sulfonyldiphenol multiple interactionsEXP 6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of ARGLU1 mRNACTDPMID:36041667
Arglu1Rat4,4'-sulfonyldiphenol increases expressionISOArglu1 (Mus musculus)6480464bisphenol S results in increased expression of ARGLU1 mRNACTDPMID:39298647
Arglu1Rat4-hydroxyphenyl retinamide increases expressionISOArglu1 (Mus musculus)6480464Fenretinide results in increased expression of ARGLU1 mRNACTDPMID:28973697
Arglu1Rataflatoxin B1 decreases methylationISOARGLU1 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of ARGLU1 geneCTDPMID:27153756
Arglu1Ratall-trans-retinoic acid decreases expressionISOARGLU1 (Homo sapiens)6480464Tretinoin results in decreased expression of ARGLU1 mRNACTDPMID:21934132
Arglu1Ratamitrole decreases expressionEXP 6480464Amitrole results in decreased expression of ARGLU1 mRNACTDPMID:38685447
Arglu1Ratarsane multiple interactionsISOARGLU1 (Homo sapiens)6480464[[sodium arsenite results in increased abundance of Arsenic] co-treated with [manganese chloride results in increased abundance of Manganese]] results in decreased expression of ARGLU1 mRNA and [sodium arsenite results in increased abundance of Arsenic] which results in decreased expression of ARGLU1 mRNACTDPMID:39836092

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Biological Process

  

Cellular Component
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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Arglu1Ratchromosome located_inIEAUniProtKB-SubCell:SL-04681600115GO_REF:0000044UniProtGO_REF:0000044
Arglu1Ratchromosome located_inIEAUniProtKB-KW:KW-01581600115GO_REF:0000043UniProtGO_REF:0000043
Arglu1Ratcytosol located_inISOARGLU1 (Homo sapiens) and UniProtKB:Q9NWB6-11624291 RGDGO_REF:0000052
Arglu1Ratcytosol located_inIEAUniProtKB:Q9NWB6 and ensembl:ENSP000003830591600115GO_REF:0000107EnsemblGO_REF:0000107
Arglu1Ratmitochondrion located_inISOARGLU1 (Homo sapiens) and UniProtKB:Q9NWB6-11624291 RGDGO_REF:0000052
Arglu1Ratmitochondrion located_inIEAUniProtKB:Q9NWB6 and ensembl:ENSP000003830591600115GO_REF:0000107EnsemblGO_REF:0000107
Arglu1Ratmitochondrion is_active_inIBACGD:CAL0000179812 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Arglu1Ratnuclear speck located_inISSUniProtKB:Q9NWB61600115GO_REF:0000024UniProtGO_REF:0000024
Arglu1Ratnuclear speck located_inIEAUniProtKB-SubCell:SL-01861600115GO_REF:0000044UniProtGO_REF:0000044
Arglu1Ratnuclear speck located_inIEAUniProtKB:Q9NWB6 and ensembl:ENSP000003830591600115GO_REF:0000107EnsemblGO_REF:0000107
Arglu1Ratnuclear speck located_inISOARGLU1 (Homo sapiens)1624291 PMID:30698747RGDPMID:30698747
Arglu1Ratnuclear speck located_inISOArglu1 (Mus musculus)1624291 PMID:30698747RGDPMID:30698747
Arglu1Ratnuclear speck located_inIEAUniProtKB:Q3UL36 and ensembl:ENSMUSP000000394931600115GO_REF:0000107EnsemblGO_REF:0000107
Arglu1Ratnucleoplasm located_inISOARGLU1 (Homo sapiens) and UniProtKB:Q9NWB6-11624291 RGDGO_REF:0000052
Arglu1Ratnucleoplasm located_inIEAUniProtKB:Q9NWB6 and ensembl:ENSP000003830591600115GO_REF:0000107EnsemblGO_REF:0000107
Arglu1Ratnucleoplasm is_active_inIBAMGI:2442985 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Arglu1Ratnucleus located_inIEAUniProtKB-KW:KW-05391600115GO_REF:0000043UniProtGO_REF:0000043
Arglu1Ratnucleus located_inIEAUniProtKB-SubCell:SL-01911600115GO_REF:0000044UniProtGO_REF:0000044
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Molecular Function
1 to 12 of 12 rows

  
1 to 12 of 12 rows


#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:12477932   PMID:25468996  



Arglu1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81687,455,097 - 87,479,148 (+)NCBIGRCr8
mRatBN7.21680,753,300 - 80,777,350 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1680,753,315 - 80,777,349 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1686,032,336 - 86,056,378 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01689,484,947 - 89,508,989 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01684,729,373 - 84,753,409 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01686,600,877 - 86,625,084 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1686,600,877 - 86,625,083 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01686,014,418 - 86,038,237 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41686,143,399 - 86,181,601 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11686,129,438 - 86,167,640 (+)NCBI
Celera1678,531,608 - 78,555,458 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
ARGLU1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3813106,541,673 - 106,568,137 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl13106,541,673 - 106,568,137 (-)EnsemblGRCh38hg38GRCh38
GRCh3713107,194,021 - 107,220,485 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3613105,993,663 - 106,018,515 (-)NCBINCBI36Build 36hg18NCBI36
Celera1388,039,892 - 88,064,742 (-)NCBICelera
Cytogenetic Map13q33.3NCBI
HuRef1387,787,076 - 87,811,929 (-)NCBIHuRef
CHM1_113107,164,330 - 107,189,194 (-)NCBICHM1_1
T2T-CHM13v2.013105,762,093 - 105,788,553 (-)NCBIT2T-CHM13v2.0
Arglu1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3988,716,307 - 8,741,818 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl88,715,075 - 8,740,521 (-)EnsemblGRCm39 Ensembl
GRCm3888,666,297 - 8,690,550 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl88,665,075 - 8,690,521 (-)EnsemblGRCm38mm10GRCm38
MGSCv3788,666,576 - 8,690,537 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3688,666,548 - 8,690,493 (-)NCBIMGSCv36mm8
Celera88,839,215 - 8,862,964 (-)NCBICelera
Cytogenetic Map8A1.1NCBI
cM Map83.57NCBI
Arglu1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554044,962,000 - 4,980,226 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554044,962,000 - 4,980,226 (+)NCBIChiLan1.0ChiLan1.0
ARGLU1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v214108,040,331 - 108,065,175 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan113106,720,660 - 106,745,507 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01387,683,306 - 87,708,108 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.113106,823,229 - 106,847,933 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl13106,823,229 - 106,847,933 (-)Ensemblpanpan1.1panPan2
ARGLU1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12255,616,498 - 55,640,157 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2255,616,977 - 55,639,784 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2255,374,265 - 55,397,955 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02256,128,655 - 56,152,154 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2256,126,981 - 56,152,126 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12255,721,376 - 55,745,016 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02255,708,193 - 55,731,591 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02255,746,940 - 55,770,656 (-)NCBIUU_Cfam_GSD_1.0
Arglu1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945190,819,302 - 190,846,313 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364725,105,269 - 5,134,313 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364725,105,836 - 5,131,294 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARGLU1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1174,239,419 - 74,267,379 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11174,241,089 - 74,267,416 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21181,617,834 - 81,644,114 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARGLU1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1384,958,279 - 84,983,102 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604641,521,231 - 41,546,048 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arglu1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247935,059,644 - 5,085,572 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247935,059,826 - 5,083,362 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Arglu1
75 total Variants

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:76
Interacting mature miRNAs:98
Transcripts:ENSRNOT00000057347
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
2300163Bmd64Bone mineral density QTL 645.30.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)163775215682752156Rat
7411648Foco22Food consumption QTL 22150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)165272646484729064Rat
2293690Bss45Bone structure and strength QTL 455.130.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)163775215682752156Rat
8694364Abfw7Abdominal fat weight QTL 712.220.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)165272646484729064Rat
8694429Bw164Body weight QTL 16450.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)165272646484729064Rat
7205510Activ5Activity QTL 53.780.00028locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)164239634584729064Rat
70205Gcr3Gastric cancer resistance QTL 32.3stomach morphology trait (VT:0000470)stomach tumor diameter (CMO:0001889)161769679182635055Rat
631525Pia14Pristane induced arthritis QTL 144.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)165571108783402471Rat

RH128419  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21680,776,999 - 80,777,205 (+)MAPPERmRatBN7.2
Rnor_6.01686,624,734 - 86,624,939NCBIRnor6.0
Rnor_5.01686,037,887 - 86,038,092UniSTSRnor5.0
RGSC_v3.41686,181,251 - 86,181,456UniSTSRGSC3.4
Celera1678,555,108 - 78,555,313UniSTS
RH 3.4 Map16787.9UniSTS
RH 3.4 Map16786.1UniSTS
Cytogenetic Map16q12.5UniSTS
FLJ10154  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21680,776,562 - 80,776,724 (+)MAPPERmRatBN7.2
Rnor_6.01686,624,297 - 86,624,458NCBIRnor6.0
Rnor_5.01686,037,450 - 86,037,611UniSTSRnor5.0
RGSC_v3.41686,180,814 - 86,180,975UniSTSRGSC3.4
Celera1678,554,671 - 78,554,832UniSTS
Cytogenetic Map16q12.5UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000057347   ⟹   ENSRNOP00000054160
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1680,753,315 - 80,777,349 (+)Ensembl
Rnor_6.0 Ensembl1686,600,877 - 86,625,083 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000088161   ⟹   ENSRNOP00000071691
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1686,624,391 - 86,624,524 (+)Ensembl
RefSeq Acc Id: NM_001024972   ⟹   NP_001020143
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81687,455,113 - 87,479,148 (+)NCBI
mRatBN7.21680,753,315 - 80,777,350 (+)NCBI
Rnor_6.01686,600,877 - 86,625,084 (+)NCBI
Rnor_5.01686,014,418 - 86,038,237 (+)NCBI
RGSC_v3.41686,143,399 - 86,181,601 (+)RGD
Celera1678,531,608 - 78,555,458 (+)RGD
Sequence:
RefSeq Acc Id: XR_010058287
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81687,455,097 - 87,463,990 (+)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_001020143 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH91344 (Get FASTA)   NCBI Sequence Viewer  
  AAI27460 (Get FASTA)   NCBI Sequence Viewer  
  EDM08788 (Get FASTA)   NCBI Sequence Viewer  
  EDM08789 (Get FASTA)   NCBI Sequence Viewer  
  EDM08790 (Get FASTA)   NCBI Sequence Viewer  
  EDM08791 (Get FASTA)   NCBI Sequence Viewer  
  EDM08792 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000054160
  ENSRNOP00000054160.2
GenBank Protein Q5BJT0 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_001020143   ⟸   NM_001024972
- UniProtKB: A0JPJ8 (UniProtKB/Swiss-Prot),   Q5BJT0 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000054160   ⟸   ENSRNOT00000057347
Ensembl Acc Id: ENSRNOP00000071691   ⟸   ENSRNOT00000088161

Name Modeler Protein Id AA Range Protein Structure
AF-Q5BJT0-F1-model_v2 AlphaFold Q5BJT0 1-271 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700250
Promoter ID:EPDNEW_R10774
Type:initiation region
Name:Arglu1_1
Description:arginine and glutamate rich 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01686,600,872 - 86,600,932EPDNEW


1 to 19 of 19 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-10598 BioCyc
Ensembl Genes ENSRNOG00000024142 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000057347 ENTREZGENE
  ENSRNOT00000057347.4 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7125115 IMAGE-MGC_LOAD
  IMAGE:7315932 IMAGE-MGC_LOAD
InterPro ARGLU1 UniProtKB/Swiss-Prot
KEGG Report rno:290912 UniProtKB/Swiss-Prot
MGC_CLONE MGC:109359 IMAGE-MGC_LOAD
  MGC:156517 IMAGE-MGC_LOAD
NCBI Gene 290912 ENTREZGENE
PANTHER ARGININE AND GLUTAMATE-RICH PROTEIN 1 UniProtKB/Swiss-Prot
  PTHR31711 UniProtKB/Swiss-Prot
Pfam ARGLU UniProtKB/Swiss-Prot
PhenoGen Arglu1 PhenoGen
RatGTEx ENSRNOG00000024142 RatGTEx
UniProt A0JPJ8 ENTREZGENE
  ARGL1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A0JPJ8 UniProtKB/Swiss-Prot
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-01-29 Arglu1  arginine and glutamate rich 1  RGD1310061  similar to hypothetical protein FLJ10154  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-12-06 RGD1310061  similar to hypothetical protein FLJ10154  RGD1310061_predicted  similar to hypothetical protein FLJ10154 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-20 RGD1310061_predicted  similar to hypothetical protein FLJ10154 (predicted)  LOC290912_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC290912_predicted  similar to hypothetical protein FLJ10154 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL