Fhod1 (formin homology 2 domain containing 1)

Advanced Search (OLGA)

Gene: Fhod1 (formin homology 2 domain containing 1) Chinchilla lanigera

Analyze

Symbol:

Fhod1

Name:

formin homology 2 domain containing 1

RGD ID:

9061361

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Chromosome 16q12 Duplication Syndrome (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

FH1/FH2 domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,380,216 - 9,396,202 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,380,202 - 9,396,400 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

Chromosome 16q12 Duplication Syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of centrosome localization (ISO)

nuclear migration (ISO)

positive regulation of stress fiber assembly (ISO)

positive regulation of transcription by RNA polymerase II (ISO)

regulation of stress fiber assembly (ISO)

Cellular Component

cytosol (ISO)

intercalated disc (ISO)

nucleoplasm (ISO)

nucleus (ISO)

stress fiber (ISO)

Molecular Function

identical protein binding (ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Fhod1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	9,380,216 - 9,396,202 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	9,380,202 - 9,396,400 (+)	NCBI	ChiLan1.0	ChiLan1.0

FHOD1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	67,229,389 - 67,247,481 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	67,229,387 - 67,247,481 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	67,263,292 - 67,281,384 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	65,820,793 - 65,838,926 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	65,820,794 - 65,838,832	NCBI
Celera	16	51,771,526 - 51,789,659 (-)	NCBI		Celera
Cytogenetic Map	16	q22.1	NCBI
HuRef	16	53,136,470 - 53,154,499 (-)	NCBI		HuRef
CHM1_1	16	68,670,620 - 68,688,753 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	73,023,673 - 73,041,798 (-)	NCBI		T2T-CHM13v2.0

Fhod1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	106,055,792 - 106,074,650 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	106,055,795 - 106,074,585 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	105,329,160 - 105,348,062 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	105,329,163 - 105,347,953 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	107,853,060 - 107,871,870 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	108,218,294 - 108,237,060 (-)	NCBI		MGSCv36	mm8
Celera	8	109,552,309 - 109,571,118 (-)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	53.04	NCBI

Fhod1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	50,116,415 - 50,135,868 (-)	NCBI		GRCr8
mRatBN7.2	19	33,206,492 - 33,225,448 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	33,206,492 - 33,225,356 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	40,022,100 - 40,041,009 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	40,675,425 - 40,694,335 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	42,964,310 - 42,983,325 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	37,284,923 - 37,303,855 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	37,284,923 - 37,303,788 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	48,150,419 - 48,169,200 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	35,144,278 - 35,163,130 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	19	32,635,094 - 32,653,786 (-)	NCBI		Celera
Cytogenetic Map	19	q11-q12	NCBI

FHOD1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	76,759,011 - 76,777,147 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	82,671,593 - 82,689,704 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	47,574,949 - 47,593,022 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	66,963,790 - 66,981,890 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	66,963,790 - 66,981,896 (-)	Ensembl	panpan1.1		panPan2

FHOD1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	82,129,846 - 82,145,605 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	82,129,965 - 82,145,604 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	82,119,368 - 82,135,124 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	82,565,040 - 82,580,796 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	82,565,051 - 82,580,795 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	82,391,138 - 82,406,892 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	82,076,692 - 82,092,442 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	82,715,958 - 82,731,714 (+)	NCBI		UU_Cfam_GSD_1.0

Fhod1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	41,879,091 - 41,894,849 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	17,694,240 - 17,709,985 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	17,694,265 - 17,709,984 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

FHOD1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	27,867,502 - 27,883,079 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	27,867,499 - 27,883,077 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	25,107,426 - 25,111,432 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

FHOD1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	60,207,972 - 60,227,032 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	60,208,109 - 60,229,272 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	22,960,229 - 22,979,001 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Fhod1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	19,074,290 - 19,090,337 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	19,072,775 - 19,090,561 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005403665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005403666	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01058415	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDK01073619	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000022710 ⟹ ENSCLAP00000022503

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955484	9,380,216 - 9,396,202 (+)	Ensembl

RefSeq Acc Id:

XM_005403665 ⟹ XP_005403722

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955484	9,380,202 - 9,396,400 (+)	NCBI

Sequence:

show sequence

CCGGTGGCCGAGCCATGGCGGGCGAGGAAGACTGCGGGGACGGGGAGCCGGTATCTGTGGTGAC
CGTAAGGGTGCAGTACTTGGAAGACACCGACCCCTTTGCATGTGCCAACTTCCCGGAGCCACGC
CGGGCCCCCACCTGCACTCTGGACGGAGCGCTGCCTCTGAGCACTCAGATAGCCGCACTGCACC
GCCTGTTGGGGGCGCCACTTAAGCTGGAGGACTGTGCCCTGCAAGTGTCTCCCTCTGGATACTA
CCTGGATCTGGAGTTGTCCTTGGAAGAGCAGCGGGAGATGCTGGAGAGCTTCTATGAAGAGATC
AGCAAAGGGCGAAAGCCCACAGTGATCCTGCGGACCCAGCTCTCCGTGAGGGTCAACACTATCT
TGGAAAAGTTGTATGGCTCCAGTGGCCCTGAACTCCGCCGCTCTCTCTTCTCACTGAAGCAGAT
CTTCCAGGAAGACAAGGACTTGGTGCCTGAATTCGTGCACTCAGAGGGGCTGAATTGCCTGATC
CGTGTGGGTGCTGCTGCTGATCACAACTACCAGAGCTACATTCTTCGAGCCCTGGGCCAGCTGA
TGCTCTTTGTGGACGGGATGCTGGGGGTGGTGGCCCACAGTGAGACAGTGCAGTGGCTATATAC
ACTGTGTGCCAGCCTGTCCCGCTTGGTGGTGAAGACAGCTCTGAAGCTGCTGCTAGTTTTTGTA
GAATATTCTGAGAGCAACGCACCGCTTTTCATCCAGGCAGTGAACTCTGTGGCCAGCACCACAG
GTGCTCTCCCCTGGGCCAATCTGATATCCATCCTAGAGGAGAAGAACGGTGCTGATGCAGAGCT
ATTGGTGTACACTGTCACTCTCATCAACAAGACGCTGGCGGCACTCCCGGACCAGGACTCCTTT
TATGACGTGACAGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCA
CCGCTGGCACCGACGTCGACCTGCGCACACAGCTTATGCTCTACGAGAGAGCCCTGCGGTTGGA
GGATGGAGACATGGAGGAAGCTGCAGCCGCTGCAGCTGCGGGTGGTCGACGGGAGCGAAGAAAG
CCCTCTTCAGAGGAGGGCAAGAGGAGCCGCAGATCTCTGGAGGGTGGGGGCTGCTTTGTGCGTG
CCCCTGAACCTGGCCCTATAGGCCCCGCCTCATCGATAGGCCCCACCTCCTCCACTGGCCTCCT
GCCAAGCCCCATCTCCAGCCCAGTGGGCTTAGCCTCTGGCCTCTGTACCTCGGCGAACCTCTTT
CCTACCATTTCCTTGGCGCCCTCCATCGACAGCTCTGGAGAGAGAAGTGTCTACAAACTTCACC
AAACTGCTCCCATTTGGGCCCCAGAGAGCCCACCTGTCCCCCAGTCCCCTACCGTGCAGGCCGG
GCTAAAAGCCCGGTTTTTGGAAAATATGGCAGCAGCAGAAACAGAGAAGCAGGCTGTGCTGGCC
CAGGGCCGGGCAGAGACACTGGCAGGGGCCACACCAGATGAAGCAGATGGACCTCCAGGCTCAC
GAGAACTGTGGGGCTCCCCAGAGCCAGCCTCTGCACCCAGAACACCCCAGAGCACTGTTCCCCG
AATCCTGCTCCAAGCCCAGCAGAGCCTTGAGCCAGAGCACAAGGAGCCACTGACACCACCAAGC
CCCAAGGCTGAGCCCATCCCGGAGATCCCTACCCGGGTATCCAAGCTCTGCATTGGGGACCTGG
ACTTCTCAGATCTGGGGGAGGATGAAGATAAGGACATGCTGAACGTGGAGTCTGTGGAGGCTGG
AAAAGGAATACCACACCCACCACCTCTACTGCCCCTGCAATCTGCAGGCCCCCCACCTCCTCCA
CCCCCACTTCCGCTATCCATCAAAGGCCCCTGCCCCCCACCTCCACCCCTGGCGGCCCCTCCTC
CCCGCTCAGCACTTGATGGCCCACTTCTCCCCACCAAGAGAAAGACAGTAAAACTCTTCTGGCG
GGAGCTGAAGCTAGCTGGGGGTCATACAGGCTCTGCAAGCCGCTTTGGGCCCTCCCCGACCCTG
TGGGCCTCCCTTGAGCCTGTTTCAGTGGACACAGCACGGCTGGAACACCTCTTTGAGTCACGAG
CCAAAGATGTGTTACCTTCCAAGAAAGCTGGTGAGGGCCGCCGAACAATGACTGTAGTACTGGA
CCCCAAGCGCAGCAATGCCATCAACATTGGTCTAACCACTTTGCCACCTGTGCATGTCATTAAG
GCTGCCCTGCTCAACTTTGATGAATTTGCTGTCAGCAAGGATGGCATTGAGAAACTACTGACCA
TGATGCCCACGGAGGAAGAGAAGCAGAAGATCCAGGAAGCCCAGCTAGCCAACCCTGATGTGCC
CCTGGGCCCAGCTGAGAATTTCCTGATGACTCTTGCTTCCATTGGGGGCCTGGCTGCCCGCCTA
CAACTCTGGGCCTTCAAGCTGGACTATGACAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTG
ACCTAAAAGTGGGCATGGAACAGCTGGTACAGAACACCACCTTCCGCTGCATCCTGGCTACCCT
GCTGGCTGTGGGCAACTTCCTCAATGGGTCCCAGAGCAGCGGCTTTGAATTGAGCTACCTGGAG
AAGGTGTCAGAAGTGAAGGACACGGTGCGCCGGCAGTCACTGCTGTACCATCTCTGCTCTCTGG
TACTCCAGACTCGGCCTGATTCCTCCGACCTCTACTCAGAGATCCCTGCCCTGACCCGCTGTGC
CAAGGTGGACTTTGAGCAGTTGACTGAAAACCTGGGGCAGCTGGAGCGCCGGAGCCGGACAGCT
GAGGAAAGCTTGCGGAGCTTGGCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGCCTCACCC
ACTTCCTGGCCCAGTGTTCCCGCCGTGTTGCCATGCTGAAGGTAGTGCACCGCCGTGTCTGCAA
CAGGTTCCACGCCTTCCTGCTCTACCTGGGCTACACTGCACAGGCAGCTCGTGAAGTACGCATC
ATGCAATTCTGCCACATTCTGCGGGAGTTTGCACTCGAGTATCGGACTTGCTGGGAACGGGTAC
TGCAGCATCAGAAGAAGCGAGCCACTTACCGTGAACGTAACAAGACCCGGGGACGCATGATCAC
TGAGACAGAGAAGTTCTCATGTGTGACTGGGGAAGTCTCCAACAACCCATCTGTCCCAGTGGCC
GTGGGGAGTGGGCCAGGCCAGGGTGATGCCAACAGTCATGCCAGTATGAAGAGTCTGCTGACCA
GCAGACCGGAGAACACTACACATGGCCGCCGCAGCAGAGGCATGGTCCAGAGTAGCTCCCCAAC
TGTGTCTACAGCAGTGGGGCCCTCTACTGCACTGCCTGATGAACCCCCAGGCTCGAGTTTACCC
AGTGATACATCAGATGAGATCATGGACCTATTAGTGCAATCAGTAACTAAGAACAGTCCTCGAG
CCTTAGCTGCTCGAGAAAGGAAGCGTTCCCGTGGCAACCGAAAATCTTTGAGACGGACGTTGAA
GAATGGGCTTGGAGACGACCTGGTGCAGGCACTAGGACTGAGCAAGACTCCTGGACTGGAGGTG
TGAGGGTGCTGCCTCCACTGATCCTGTCGTATACGAGACTGTAGAACAAAGAGGGCCCAGCACA
GAATTCCGGTCCCAGAACCTTGTGCTCAGGGGCCAGTGCTTTTAGCAGTATTAGGTGTGTGTGT
GTGTGTGTGTGTACATGCGTGTATGTGAGCTCCCTACTCAAGGGGCAAAATAAAGTTTTCTTAG
CTAATCTAA

hide sequence

RefSeq Acc Id:

XM_005403666 ⟹ XP_005403723

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955484	9,380,202 - 9,396,400 (+)	NCBI

Sequence:

show sequence

CCGGTGGCCGAGCCATGGCGGGCGAGGAAGACTGCGGGGACGGGGAGCCGGTATCTGTGGTGAC
CGTAAGGGTGCAGTACTTGGAAGACACCGACCCCTTTGCATGTGCCAACTTCCCGGAGCCACGC
CGGGCCCCCACCTGCACTCTGGACGGAGCGCTGCCTCTGAGCACTCAGATAGCCGCACTGCACC
GCCTGTTGGGGGCGCCACTTAAGCTGGAGGACTGTGCCCTGCAAGTGTCTCCCTCTGGATACTA
CCTGGATCTGGAGTTGTCCTTGGAAGAGCAGCGGGAGATGCTGGAGAGCTTCTATGAAGAGATC
AGCAAAGGGCGAAAGCCCACAGTGATCCTGCGGACCCAGCTCTCCGTGAGGGTCAACACTATCT
TGGAAAAGTTGTATGGCTCCAGTGGCCCTGAACTCCGCCGCTCTCTCTTCTCACTGAAGCAGAT
CTTCCAGGAAGACAAGGACTTGGTGCCTGAATTCGTGCACTCAGAGGGGCTGAATTGCCTGATC
CGTGTGGGTGCTGCTGCTGATCACAACTACCAGAGCTACATTCTTCGAGCCCTGGGCCAGCTGA
TGCTCTTTGTGGACGGGATGCTGGGGGTGGTGGCCCACAGTGAGACAGTGCAGTGGCTATATAC
ACTGTGTGCCAGCCTGTCCCGCTTGGTGGTGAAGACAGCTCTGAAGCTGCTGCTAGTTTTTGTA
GAATATTCTGAGAGCAACGCACCGCTTTTCATCCAGGCAGTGAACTCTGTGGCCAGCACCACAG
GTGCTCTCCCCTGGGCCAATCTGATATCCATCCTAGAGGAGAAGAACGGTGCTGATGCAGAGCT
ATTGGTGTACACTGTCACTCTCATCAACAAGACGCTGGCGGCACTCCCGGACCAGGACTCCTTT
TATGACGTGACAGATGCACTGGAGCAGCAGGGCATGGAAGCGCTGGTCCAGCGCCACCTGGGCA
CCGCTGGCACCGACGTCGACCTGCGCACACAGCTTATGCTCTACGAGAGAGCCCTGCGGTTGGA
GGATGGAGACATGGAGGAAGCTGCAGCCGCTGCAGCTGCGGGTGGTCGACGGGAGCGAAGAAAG
CCCTCTTCAGAGGAGGGCAAGAGGAGCCGCAGATCTCTGGAGGGTGGGGGCTGCTTTGTGCGTG
CCCCTGAACCTGGCCCTATAGGCCCCGCCTCATCGATAGGCCCCACCTCCTCCACTGGCCTCCT
GCCAAGCCCCATCTCCAGCCCAGTGGGCTTAGCCTCTGGCCTCTGTACCTCGGCGAACCTCTTT
CCTACCATTTCCTTGGCGCCCTCCATCGACAGCTCTGGAGAGAGAAGTGTCTACAAAGCCCGGT
TTTTGGAAAATATGGCAGCAGCAGAAACAGAGAAGCAGGCTGTGCTGGCCCAGGGCCGGGCAGA
GACACTGGCAGGGGCCACACCAGATGAAGCAGATGGACCTCCAGGCTCACGAGAACTGTGGGGC
TCCCCAGAGCCAGCCTCTGCACCCAGAACACCCCAGAGCACTGTTCCCCGAATCCTGCTCCAAG
CCCAGCAGAGCCTTGAGCCAGAGCACAAGGAGCCACTGACACCACCAAGCCCCAAGGCTGAGCC
CATCCCGGAGATCCCTACCCGGGTATCCAAGCTCTGCATTGGGGACCTGGACTTCTCAGATCTG
GGGGAGGATGAAGATAAGGACATGCTGAACGTGGAGTCTGTGGAGGCTGGAAAAGGAATACCAC
ACCCACCACCTCTACTGCCCCTGCAATCTGCAGGCCCCCCACCTCCTCCACCCCCACTTCCGCT
ATCCATCAAAGGCCCCTGCCCCCCACCTCCACCCCTGGCGGCCCCTCCTCCCCGCTCAGCACTT
GATGGCCCACTTCTCCCCACCAAGAGAAAGACAGTAAAACTCTTCTGGCGGGAGCTGAAGCTAG
CTGGGGGTCATACAGGCTCTGCAAGCCGCTTTGGGCCCTCCCCGACCCTGTGGGCCTCCCTTGA
GCCTGTTTCAGTGGACACAGCACGGCTGGAACACCTCTTTGAGTCACGAGCCAAAGATGTGTTA
CCTTCCAAGAAAGCTGGTGAGGGCCGCCGAACAATGACTGTAGTACTGGACCCCAAGCGCAGCA
ATGCCATCAACATTGGTCTAACCACTTTGCCACCTGTGCATGTCATTAAGGCTGCCCTGCTCAA
CTTTGATGAATTTGCTGTCAGCAAGGATGGCATTGAGAAACTACTGACCATGATGCCCACGGAG
GAAGAGAAGCAGAAGATCCAGGAAGCCCAGCTAGCCAACCCTGATGTGCCCCTGGGCCCAGCTG
AGAATTTCCTGATGACTCTTGCTTCCATTGGGGGCCTGGCTGCCCGCCTACAACTCTGGGCCTT
CAAGCTGGACTATGACAGCATGGAGCGGGAAATTGCAGAGCCACTGTTTGACCTAAAAGTGGGC
ATGGAACAGCTGGTACAGAACACCACCTTCCGCTGCATCCTGGCTACCCTGCTGGCTGTGGGCA
ACTTCCTCAATGGGTCCCAGAGCAGCGGCTTTGAATTGAGCTACCTGGAGAAGGTGTCAGAAGT
GAAGGACACGGTGCGCCGGCAGTCACTGCTGTACCATCTCTGCTCTCTGGTACTCCAGACTCGG
CCTGATTCCTCCGACCTCTACTCAGAGATCCCTGCCCTGACCCGCTGTGCCAAGGTGGACTTTG
AGCAGTTGACTGAAAACCTGGGGCAGCTGGAGCGCCGGAGCCGGACAGCTGAGGAAAGCTTGCG
GAGCTTGGCCAAGCATGAGCTGGCCCCAGCCCTGCGTGCCCGCCTCACCCACTTCCTGGCCCAG
TGTTCCCGCCGTGTTGCCATGCTGAAGGTAGTGCACCGCCGTGTCTGCAACAGGTTCCACGCCT
TCCTGCTCTACCTGGGCTACACTGCACAGGCAGCTCGTGAAGTACGCATCATGCAATTCTGCCA
CATTCTGCGGGAGTTTGCACTCGAGTATCGGACTTGCTGGGAACGGGTACTGCAGCATCAGAAG
AAGCGAGCCACTTACCGTGAACGTAACAAGACCCGGGGACGCATGATCACTGAGACAGAGAAGT
TCTCATGTGTGACTGGGGAAGTCTCCAACAACCCATCTGTCCCAGTGGCCGTGGGGAGTGGGCC
AGGCCAGGGTGATGCCAACAGTCATGCCAGTATGAAGAGTCTGCTGACCAGCAGACCGGAGAAC
ACTACACATGGCCGCCGCAGCAGAGGCATGGTCCAGAGTAGCTCCCCAACTGTGTCTACAGCAG
TGGGGCCCTCTACTGCACTGCCTGATGAACCCCCAGGCTCGAGTTTACCCAGTGATACATCAGA
TGAGATCATGGACCTATTAGTGCAATCAGTAACTAAGAACAGTCCTCGAGCCTTAGCTGCTCGA
GAAAGGAAGCGTTCCCGTGGCAACCGAAAATCTTTGAGACGGACGTTGAAGAATGGGCTTGGAG
ACGACCTGGTGCAGGCACTAGGACTGAGCAAGACTCCTGGACTGGAGGTGTGAGGGTGCTGCCT
CCACTGATCCTGTCGTATACGAGACTGTAGAACAAAGAGGGCCCAGCACAGAATTCCGGTCCCA
GAACCTTGTGCTCAGGGGCCAGTGCTTTTAGCAGTATTAGGTGTGTGTGTGTGTGTGTGTGTAC
ATGCGTGTATGTGAGCTCCCTACTCAAGGGGCAAAATAAAGTTTTCTTAGCTAATCTAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005403722	(Get FASTA)	NCBI Sequence Viewer
	XP_005403723	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000022503
	ENSCLAP00000022503.1

RefSeq Acc Id:	XP_005403722 ⟸ XM_005403665
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2VYE0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGEEDCGDGEPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCTLDGALPLSTQIAALHRLLGA PLKLEDCALQVSPSGYYLDLELSLEEQREMLESFYEEISKGRKPTVILRTQLSVRVNTILEKLY GSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLNCLIRVGAAADHNYQSYILRALGQLMLFVD GMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSESNAPLFIQAVNSVASTTGALPW ANLISILEEKNGADAELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTD VDLRTQLMLYERALRLEDGDMEEAAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCFVRAPEPG PIGPASSIGPTSSTGLLPSPISSPVGLASGLCTSANLFPTISLAPSIDSSGERSVYKLHQTAPI WAPESPPVPQSPTVQAGLKARFLENMAAAETEKQAVLAQGRAETLAGATPDEADGPPGSRELWG SPEPASAPRTPQSTVPRILLQAQQSLEPEHKEPLTPPSPKAEPIPEIPTRVSKLCIGDLDFSDL GEDEDKDMLNVESVEAGKGIPHPPPLLPLQSAGPPPPPPPLPLSIKGPCPPPPPLAAPPPRSAL DGPLLPTKRKTVKLFWRELKLAGGHTGSASRFGPSPTLWASLEPVSVDTARLEHLFESRAKDVL PSKKAGEGRRTMTVVLDPKRSNAINIGLTTLPPVHVIKAALLNFDEFAVSKDGIEKLLTMMPTE EEKQKIQEAQLANPDVPLGPAENFLMTLASIGGLAARLQLWAFKLDYDSMEREIAEPLFDLKVG MEQLVQNTTFRCILATLLAVGNFLNGSQSSGFELSYLEKVSEVKDTVRRQSLLYHLCSLVLQTR PDSSDLYSEIPALTRCAKVDFEQLTENLGQLERRSRTAEESLRSLAKHELAPALRARLTHFLAQ CSRRVAMLKVVHRRVCNRFHAFLLYLGYTAQAAREVRIMQFCHILREFALEYRTCWERVLQHQK KRATYRERNKTRGRMITETEKFSCVTGEVSNNPSVPVAVGSGPGQGDANSHASMKSLLTSRPEN TTHGRRSRGMVQSSSPTVSTAVGPSTALPDEPPGSSLPSDTSDEIMDLLVQSVTKNSPRALAAR ERKRSRGNRKSLRRTLKNGLGDDLVQALGLSKTPGLEV hide sequence

RefSeq Acc Id:	XP_005403723 ⟸ XM_005403666
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2VYE0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAGEEDCGDGEPVSVVTVRVQYLEDTDPFACANFPEPRRAPTCTLDGALPLSTQIAALHRLLGA PLKLEDCALQVSPSGYYLDLELSLEEQREMLESFYEEISKGRKPTVILRTQLSVRVNTILEKLY GSSGPELRRSLFSLKQIFQEDKDLVPEFVHSEGLNCLIRVGAAADHNYQSYILRALGQLMLFVD GMLGVVAHSETVQWLYTLCASLSRLVVKTALKLLLVFVEYSESNAPLFIQAVNSVASTTGALPW ANLISILEEKNGADAELLVYTVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGTAGTD VDLRTQLMLYERALRLEDGDMEEAAAAAAAGGRRERRKPSSEEGKRSRRSLEGGGCFVRAPEPG PIGPASSIGPTSSTGLLPSPISSPVGLASGLCTSANLFPTISLAPSIDSSGERSVYKARFLENM AAAETEKQAVLAQGRAETLAGATPDEADGPPGSRELWGSPEPASAPRTPQSTVPRILLQAQQSL EPEHKEPLTPPSPKAEPIPEIPTRVSKLCIGDLDFSDLGEDEDKDMLNVESVEAGKGIPHPPPL LPLQSAGPPPPPPPLPLSIKGPCPPPPPLAAPPPRSALDGPLLPTKRKTVKLFWRELKLAGGHT GSASRFGPSPTLWASLEPVSVDTARLEHLFESRAKDVLPSKKAGEGRRTMTVVLDPKRSNAINI GLTTLPPVHVIKAALLNFDEFAVSKDGIEKLLTMMPTEEEKQKIQEAQLANPDVPLGPAENFLM TLASIGGLAARLQLWAFKLDYDSMEREIAEPLFDLKVGMEQLVQNTTFRCILATLLAVGNFLNG SQSSGFELSYLEKVSEVKDTVRRQSLLYHLCSLVLQTRPDSSDLYSEIPALTRCAKVDFEQLTE NLGQLERRSRTAEESLRSLAKHELAPALRARLTHFLAQCSRRVAMLKVVHRRVCNRFHAFLLYL GYTAQAAREVRIMQFCHILREFALEYRTCWERVLQHQKKRATYRERNKTRGRMITETEKFSCVT GEVSNNPSVPVAVGSGPGQGDANSHASMKSLLTSRPENTTHGRRSRGMVQSSSPTVSTAVGPST ALPDEPPGSSLPSDTSDEIMDLLVQSVTKNSPRALAARERKRSRGNRKSLRRTLKNGLGDDLVQ ALGLSKTPGLEV hide sequence

Ensembl Acc Id:

ENSCLAP00000022503 ⟸ ENSCLAT00000022710

Protein Domains

FH2 GBD/FH3

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000015436	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000022710	ENTREZGENE
	ENSCLAT00000022710.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.2220	UniProtKB/TrEMBL
	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	FH2_Formin	UniProtKB/TrEMBL
	FH2_Formin_sf	UniProtKB/TrEMBL
	FHOD1_GBD_N	UniProtKB/TrEMBL
	GBD/FH3_dom	UniProtKB/TrEMBL
NCBI Gene	Fhod1	ENTREZGENE
PANTHER	FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I	UniProtKB/TrEMBL
	PTHR45920:SF2	UniProtKB/TrEMBL
Pfam	FH2	UniProtKB/TrEMBL
	Formin_GBD_N	UniProtKB/TrEMBL
PROSITE	FH2	UniProtKB/TrEMBL
	GBD_FH3	UniProtKB/TrEMBL
SMART	FH2	UniProtKB/TrEMBL
Superfamily-SCOP	Formin homology 2 domain (FH2 domain)	UniProtKB/TrEMBL
	SSF48371	UniProtKB/TrEMBL
UniProt	A0A8C2VYE0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar