Tsbp1 (testis expressed basic protein 1)

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Gene: Tsbp1 (testis expressed basic protein 1) Chinchilla lanigera

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Symbol:

Tsbp1

Name:

testis expressed basic protein 1

RGD ID:

9023434

Description:

ASSOCIATED WITH proteasome-associated autoinflammatory syndrome 1 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chromosome unknown open reading frame, human C6orf10; LOC102007696; LOC102017602; uncharacterized LOC102017602; uncharacterized protein C6orf10 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

proteasome-associated autoinflammatory syndrome 1 (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Tsbp1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI	ChiLan1.0	ChiLan1.0

TSBP1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	32,292,698 - 32,371,903 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	32,288,526 - 32,371,907 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	32,260,475 - 32,339,680 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	32,368,453 - 32,447,634 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	32,368,469 - 32,447,634	NCBI
Celera	6	33,827,603 - 33,906,430 (-)	NCBI		Celera
Cytogenetic Map	6	p21.32	NCBI
HuRef	6	32,014,824 - 32,093,640 (-)	NCBI		HuRef
CHM1_1	6	32,262,950 - 32,342,143 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	32,145,999 - 32,224,841 (-)	NCBI		T2T-CHM13v2.0

Tsbp1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	34,617,749 - 34,679,708 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	34,617,794 - 34,679,708 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	34,398,767 - 34,460,734 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	34,398,820 - 34,460,734 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	34,535,765 - 34,597,679 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	34,024,335 - 34,068,780 (+)	NCBI		MGSCv36	mm8
Celera	17	37,167,318 - 37,229,216 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.0	NCBI

Tsbp1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	4,411,926 - 4,469,214 (-)	NCBI		GRCr8
mRatBN7.2	20	4,410,002 - 4,467,284 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	4,410,004 - 4,457,053 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	5,170,226 - 5,219,942 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	4,531,964 - 4,581,678 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	5,005,225 - 5,052,249 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	4,178,655 - 4,235,947 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	4,178,686 - 4,235,950 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	6,258,025 - 6,315,303 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	4,532,358 - 4,579,409 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	20	6,012,617 - 6,059,663 (-)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

TSBP1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	46,755,541 - 46,839,649 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	42,716,834 - 42,801,131 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	31,939,658 - 32,021,872 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	32,818,649 - 32,899,107 (-)	NCBI	panpan1.1	PanPan1.1	panPan2

TSBP1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	1,749,856 - 1,920,630 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	1,881,267 - 2,066,496 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	2,084,816 - 2,194,622 (-)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	12	1,736,871 - 1,926,564 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	1,806,337 - 2,006,128 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	1,872,898 - 2,072,882 (-)	NCBI		UU_Cfam_GSD_1.0

Tsbp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	36,827,182 - 36,915,025 (-)	NCBI		HiC_Itri_2

TSBP1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	7	24,406,241 - 24,409,937 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	28,417,132 - 28,483,729 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSBP1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	39,680,157 - 39,743,399 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666044	32,186,563 - 32,259,174 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013516714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013516715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013516716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013516717	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01034169	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01034170	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01034171	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01034172	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01034173	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01034174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01082664	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_013516714 ⟹ XP_013372168

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI

Sequence:

show sequence

ATTCCCTTTGTCTGCTTAATTCTGATAAACCTGAGTTACACAGTTCCTCAGAGACCCTCTGCAT
CTTTGTCTACGAGGGCCTCCCTGACACCCAAGTTCATACTGCTCAGAAACAGTAAGCTTGAGTT
GTTTTATCTTGGCCTCCCTCTGACAAAGGAATCCAGATGACGTGGAACCCACTGAAGGCAGTAC
CTGGAAAATGGCAGTCCTGGAAATAACTCTGGCCATCATCCTGACTCTGCTGGCACTTGCCATT
CTGGCCATTTTGTTAACAAGATGGACGCGACGCAGGCAAAATGAAATGTATATGTCCAGATACA
GTTCAGAACAAAGTTTTAGGCTTCTGGACTATGAAGACGGCACAGGTTCATCCTCTAGGAGACC
TAAAAAAGGAAGAGGATGCCGGCAACCATATTTAACAGAAAGTGAAGACTCCAGAGGAAAATAC
ACACCATCAGCCAGCTCCGGAGGACTATCTCGGTCAAGTATTGCACTATCTCGATCAAATACTG
GTGAGGCACAGCATTTAAAAGCAACTCAACCTCTATCCAGCACTCCAGGATCTATCACTGGAGC
TATTGGACCTATAATGCAATTCTCAGCACCTATCCCTGGAGCTACTGGACCTATCAAGCTCTCT
CAAAAAACCATTGTGCAAACTCCAGGGCCTATTGTACAATATATGGGACAGAGAGCTCCAACTT
CAGAAACGACCTCAGAACCACCGCCTAGTACATTCAGGAGATCAGCTCCACTTGCCATCACTGA
TTCATCTTCAACTCCCAGCAGCGATTTATCTGTGATACCCACAACAAAACCTGAGAAGTCTGCA
AAAAAACAAGAGCCAACACATGTAGCAGTACCTATCATAACTCCAATACCAATTGCAATTGCTC
CAGTAGCAGCCTTGGATGCTTTTGGAAAAATCGTCATACTTCCAGGTTACGTGGATGAAGAACT
TACAAAAAAATCAAGTATCAAAGCCCAACCTCCAAAACACAGAGAAATGACAGAAAGCAAAGAA
ACACTAAAGAAGGAAGTATTTACAGATTCTGAAGATTCTTTAGCAATACAAAAAAGGGAGTCCC
AAAAAAGAGCAAAATTCACTGAGTTGGAAAAAGACAAGATAGGAATGGAGGTCAAGGTAAAGAG
TGATACTGAAATAAAAGAACAGGCAGTCCAGGTAAAGAAAAGTCAAGAAGGAGTACCACAACAC
CAGGAACCGCAAATAAAGAGTAAGATGGAAGCACCAAAACAACCCCAAGAAAAAGAATCTCAGA
TAAAAGAGAAGAAAGAGGAAGTACCAAAAGCCCAAGAATCCCAAGTAAAAAGTGAGATGAAAGT
ACCACAAAAATCTGAAGCCCAAGAAAAGAAAACTGGAGAAGAAAAACCAAAGGAAACAGCAGCT
GAACAAAAGGCAGGAGGAGAATCAGGACAGAAAGCCCAAGAAAAAAAAAGTGAGACAGAGACAC
TGAAAGAAAAGAAAGCCCCAGAAAAGAAAGGTGAGGCAGAGACACCCAGTGGAGAGAAAGCCCC
AGAAAAGAAAGGTGAGGCACAAATGCCAAAAGAAAAGAAAGACCAAGAAAAGCCTAGTAAAGAA
GTATCTGAGAATAAGGGAAAGGAGGGCAAAGAAAAGACAGATGCAAAGACAAGCCAGAGTACAA
AAGAAAAAGATGATAAAAACAAGAAAGATGAAGGAAAAGGCAAAGAAAACAAAGAAGCAGAAGC
CAAGGATAAAAAACTCTCAGTAAAAGGCAAAAGCAAGTAAAGGAAGGGAGCACAACAAAACGGT
GAAAGAGGAGGAGTAAATAACAGCCCATAAAACAGATCATCATTATGATTCCCATCCTCCCAAT
ACGAGCCATGTCCCAGCCAATGCTTGATTATAAAATCTGTTTAATGTTATAAATCTGCAGATTA
GGCTCTTCAGAAGTTTCACCACTTTTAGACCTCTCAGCCATAAATTTTGGCTTTCAAATGTTTG
TTTTACAAGCTCATATATAGACATATATTATTCAGTCAAGAAAAAAAATGAGTACTTCATGAAA
TAAAACATTTTTATT

hide sequence

RefSeq Acc Id:

XM_013516715 ⟹ XP_013372169

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI

Sequence:

show sequence

ATTCCCTTTGTCTGCTTAATTCTGATAAACCTGAGTTACACAGTTCCTCAGAGACCCTCTGCAT
CTTTGTCTACGAGGGCCTCCCTGACACCCAAGTTCATACTGCTCAGAAACAGTAAGCTTGAGTT
GTTTTATCTTGGCCTCCCTCTGACAAAGGAATCCAGATGACGTGGAACCCACTGAAGGCAGTAC
CTGGAAAATGGCAGTCCTGGAAATAACTCTGGCCATCATCCTGACTCTGCTGGCACTTGCCATT
CTGGCCATTTTGTTAACAAGATGGACGCGACGCAGGCAAAATGAAATGTATATGTCCAGATACA
GTTCAGAACAAAGTTTTAGGCTTCTGGACTATGAAGACGGCACAGGTTCATCCTCTAGGAGACC
TAAAAAAGGAAGAGGATGCCGGCAACCATATTTAACAGAAAGTGAAGACTCCAGAGGAAAATAC
ACACCATCAGCCAGCTCCGGAGGACTATCTCGGTCAAGTATTGCACTATCTCGATCAAATACTG
GTGAGGCACAGCATTTAAAAGCAACTCAACCTCTATCCAGCACTCCAGGATCTATCACTGGAGC
TATTGGACCTATAATGCAATTCTCAGCACCTATCCCTGGAGCTACTGGACCTATCAAGCTCTCT
CAAAAAACCATTGTGCAAACTCCAGGGCCTATTGCAGAACCACCGCCTAGTACATTCAGGAGAT
CAGCTCCACTTGCCATCACTGATTCATCTTCAACTCCCAGCAGCGATTTATCTGTGATACCCAC
AACAAAACCTGAGAAGTCTGCAAAAAAACAAGAGCCAACACATGTAGCAGTACCTATCATAACT
CCAATACCAATTGCAATTGCTCCAGTAGCAGCCTTGGATGCTTTTGGAAAAATCGTCATACTTC
CAGGTTACGTGGATGAAGAACTTACAAAAAAATCAAGTATCAAAGCCCAACCTCCAAAACACAG
AGAAATGACAGAAAGCAAAGAAACACTAAAGAAGGAAGTATTTACAGATTCTGAAGATTCTTTA
GCAATACAAAAAAGGGAGTCCCAAAAAAGAGCAAAATTCACTGAGTTGGAAAAAGACAAGATAG
GAATGGAGGTCAAGGTAAAGAGTGATACTGAAATAAAAGAACAGGCAGTCCAGGTAAAGAAAAG
TCAAGAAGGAGTACCACAACACCAGGAACCGCAAATAAAGAGTAAGATGGAAGCACCAAAACAA
CCCCAAGAAAAAGAATCTCAGATAAAAGAGAAGAAAGAGGAAGTACCAAAAGCCCAAGAATCCC
AAGTAAAAAGTGAGATGAAAGTACCACAAAAATCTGAAGCCCAAGAAAAGAAAACTGGAGAAGA
AAAACCAAAGGAAACAGCAGCTGAACAAAAGGCAGGAGGAGAATCAGGACAGAAAGCCCAAGAA
AAAAAAAGTGAGACAGAGACACTGAAAGAAAAGAAAGCCCCAGAAAAGAAAGGTGAGGCAGAGA
CACCCAGTGGAGAGAAAGCCCCAGAAAAGAAAGGTGAGGCACAAATGCCAAAAGAAAAGAAAGA
CCAAGAAAAGCCTAGTAAAGAAGTATCTGAGAATAAGGGAAAGGAGGGCAAAGAAAAGACAGAT
GCAAAGACAAGCCAGAGTACAAAAGAAAAAGATGATAAAAACAAGAAAGATGAAGGAAAAGGCA
AAGAAAACAAAGAAGCAGAAGCCAAGGATAAAAAACTCTCAGTAAAAGGCAAAAGCAAGTAAAG
GAAGGGAGCACAACAAAACGGTGAAAGAGGAGGAGTAAATAACAGCCCATAAAACAGATCATCA
TTATGATTCCCATCCTCCCAATACGAGCCATGTCCCAGCCAATGCTTGATTATAAAATCTGTTT
AATGTTATAAATCTGCAGATTAGGCTCTTCAGAAGTTTCACCACTTTTAGACCTCTCAGCCATA
AATTTTGGCTTTCAAATGTTTGTTTTACAAGCTCATATATAGACATATATTATTCAGTCAAGAA
AAAAAATGAGTACTTCATGAAATAAAACATTTTTATT

hide sequence

RefSeq Acc Id:

XM_013516716 ⟹ XP_013372170

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI

Sequence:

show sequence

ATTCCCTTTGTCTGCTTAATTCTGATAAACCTGAGTTACACAGTTCCTCAGAGACCCTCTGCAT
CTTTGTCTACGAGGGCCTCCCTGACACCCAAGTTCATACTGCTCAGAAACAGTAAGCTTGAGTT
GTTTTATCTTGGCCTCCCTCTGACAAAGGAATCCAGATGACGTGGAACCCACTGAAGGCAGTAC
CTGGAAAATGGCAGTCCTGGAAATAACTCTGGCCATCATCCTGACTCTGCTGGCACTTGCCATT
CTGGCCATTTTGTTAACAAGATGGACGCGACGCAGGCAAAATGAAATGTATATGTCCAGATACA
GTTCAGAACAAAGTTTTAGGCTTCTGGACTATGAAGACGGCACAGGTTCATCCTCTAGGAGACC
TAAAAAAGGAAGAGGATGCCGGCAACCATATTTAACAGAAAGTGAAGACTCCAGAGGAAAATAC
ACACCATCAGCCAGCTCCGGAGGACTATCTCGGTCAAGTATTGCACTATCTCGATCAAATACTG
GTGAGGCACAGCATTTAAAAGCAACTCAACCTCTATCCAGCACTCCAGGATCTATCACTGGAGC
TATTGGACCTATAATGCAATTCTCAGCACCTATCCCTGGAGCTACTGGACCTATCAAGCTCTCT
CAAAAAACCATTGTGCAAACTCCAGGGCCTATTGCAGAACCACCGCCTAGTACATTCACTGATT
CATCTTCAACTCCCAGCAGCGATTTATCTGTGATACCCACAACAAAACCTGAGAAGTCTGCAAA
AAAACAAGAGCCAACACATGTAGCAGTACCTATCATAACTCCAATACCAATTGCAATTGCTCCA
GTAGCAGCCTTGGATGCTTTTGGAAAAATCGTCATACTTCCAGGTTACGTGGATGAAGAACTTA
CAAAAAAATCAAGTATCAAAGCCCAACCTCCAAAACACAGAGAAATGACAGAAAGCAAAGAAAC
ACTAAAGAAGGAAGTATTTACAGATTCTGAAGATTCTTTAGCAATACAAAAAAGGGAGTCCCAA
AAAAGAGCAAAATTCACTGAGTTGGAAAAAGACAAGATAGGAATGGAGGTCAAGGTAAAGAGTG
ATACTGAAATAAAAGAACAGGCAGTCCAGGTAAAGAAAAGTCAAGAAGGAGTACCACAACACCA
GGAACCGCAAATAAAGAGTAAGATGGAAGCACCAAAACAACCCCAAGAAAAAGAATCTCAGATA
AAAGAGAAGAAAGAGGAAGTACCAAAAGCCCAAGAATCCCAAGTAAAAAGTGAGATGAAAGTAC
CACAAAAATCTGAAGCCCAAGAAAAGAAAACTGGAGAAGAAAAACCAAAGGAAACAGCAGCTGA
ACAAAAGGCAGGAGGAGAATCAGGACAGAAAGCCCAAGAAAAAAAAAGTGAGACAGAGACACTG
AAAGAAAAGAAAGCCCCAGAAAAGAAAGGTGAGGCAGAGACACCCAGTGGAGAGAAAGCCCCAG
AAAAGAAAGGTGAGGCACAAATGCCAAAAGAAAAGAAAGACCAAGAAAAGCCTAGTAAAGAAGT
ATCTGAGAATAAGGGAAAGGAGGGCAAAGAAAAGACAGATGCAAAGACAAGCCAGAGTACAAAA
GAAAAAGATGATAAAAACAAGAAAGATGAAGGAAAAGGCAAAGAAAACAAAGAAGCAGAAGCCA
AGGATAAAAAACTCTCAGTAAAAGGCAAAAGCAAGTAAAGGAAGGGAGCACAACAAAACGGTGA
AAGAGGAGGAGTAAATAACAGCCCATAAAACAGATCATCATTATGATTCCCATCCTCCCAATAC
GAGCCATGTCCCAGCCAATGCTTGATTATAAAATCTGTTTAATGTTATAAATCTGCAGATTAGG
CTCTTCAGAAGTTTCACCACTTTTAGACCTCTCAGCCATAAATTTTGGCTTTCAAATGTTTGTT
TTACAAGCTCATATATAGACATATATTATTCAGTCAAGAAAAAAAATGAGTACTTCATGAAATA
AAACATTTTTATT

hide sequence

RefSeq Acc Id:

XM_013516717 ⟹ XP_013372171

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955437	830,178 - 915,199 (-)	NCBI

Sequence:

show sequence

ATTCCCTTTGTCTGCTTAATTCTGATAAACCTGAGTTACACAGTTCCTCAGAGACCCTCTGCAT
CTTTGTCTACGAGGGCCTCCCTGACACCCAAGTTCATACTGCTCAGAAACAGTAAGCTTGAGTT
GTTTTATCTTGGCCTCCCTCTGACAAAGGAATCCAGATGACGTGGAACCCACTGAAGGCAGTAC
CTGGAAAATGGCAGTCCTGGAAATAACTCTGGCCATCATCCTGACTCTGCTGGCACTTGCCATT
CTGGCCATTTTGTTAACAAGATGGACGCGACGCAGGCAAAATGAAATGTATATGTCCAGATACA
GTTCAGAACAAAGTTTTAGGCTTCTGGACTATGAAGACGGCACAGGTTCATCCTCTAGGAGACC
TAAAAAAGGAAGAGGATGCCGGCAACCATATTTAACAGAAAGTGAAGACTCCAGAGGAAAATAC
ACACCATCAGCCAGCTCCGGAGGACTATCTCGGTCAAGTATTGCACTATCTCGATCAAATACTG
GTGAGGCACAGCATTTAAAAGCAACTCAACCTCTATCCAGCACTCCAGGATCTATCACTGGAGC
TATTGGACCTATAATGCAATTCTCAGCACCTATCCCTGGAGCTACTGGACCTATCAAGCTCTCT
CAAAAAACCATTGTGCAAACTCCAGGGCCTATTGCAGAACCACCGCCTAGTACATTCACTGATT
CATCTTCAACTCCCAGCAGCGCAAAACCTGAGAAGTCTGCAAAAAAACAAGAGCCAACACATGT
AGCAGTACCTATCATAACTCCAATACCAATTGCAATTGCTCCAGTAGCAGCCTTGGATGCTTTT
GGAAAAATCGTCATACTTCCAGGTTACGTGGATGAAGAACTTACAAAAAAATCAAGTATCAAAG
CCCAACCTCCAAAACACAGAGAAATGACAGAAAGCAAAGAAACACTAAAGAAGGAAGTATTTAC
AGATTCTGAAGATTCTTTAGCAATACAAAAAAGGGAGTCCCAAAAAAGAGCAAAATTCACTGAG
TTGGAAAAAGACAAGATAGGAATGGAGGTCAAGGTAAAGAGTGATACTGAAATAAAAGAACAGG
CAGTCCAGGTAAAGAAAAGTCAAGAAGGAGTACCACAACACCAGGAACCGCAAATAAAGAGTAA
GATGGAAGCACCAAAACAACCCCAAGAAAAAGAATCTCAGATAAAAGAGAAGAAAGAGGAAGTA
CCAAAAGCCCAAGAATCCCAAGTAAAAAGTGAGATGAAAGTACCACAAAAATCTGAAGCCCAAG
AAAAGAAAACTGGAGAAGAAAAACCAAAGGAAACAGCAGCTGAACAAAAGGCAGGAGGAGAATC
AGGACAGAAAGCCCAAGAAAAAAAAAGTGAGACAGAGACACTGAAAGAAAAGAAAGCCCCAGAA
AAGAAAGGTGAGGCAGAGACACCCAGTGGAGAGAAAGCCCCAGAAAAGAAAGGTGAGGCACAAA
TGCCAAAAGAAAAGAAAGACCAAGAAAAGCCTAGTAAAGAAGTATCTGAGAATAAGGGAAAGGA
GGGCAAAGAAAAGACAGATGCAAAGACAAGCCAGAGTACAAAAGAAAAAGATGATAAAAACAAG
AAAGATGAAGGAAAAGGCAAAGAAAACAAAGAAGCAGAAGCCAAGGATAAAAAACTCTCAGTAA
AAGGCAAAAGCAAGTAAAGGAAGGGAGCACAACAAAACGGTGAAAGAGGAGGAGTAAATAACAG
CCCATAAAACAGATCATCATTATGATTCCCATCCTCCCAATACGAGCCATGTCCCAGCCAATGC
TTGATTATAAAATCTGTTTAATGTTATAAATCTGCAGATTAGGCTCTTCAGAAGTTTCACCACT
TTTAGACCTCTCAGCCATAAATTTTGGCTTTCAAATGTTTGTTTTACAAGCTCATATATAGACA
TATATTATTCAGTCAAGAAAAAAAATGAGTACTTCATGAAATAAAACATTTTTATT

hide sequence

Protein Sequences


Protein RefSeqs	XP_013372168	(Get FASTA)	NCBI Sequence Viewer
	XP_013372169	(Get FASTA)	NCBI Sequence Viewer
	XP_013372170	(Get FASTA)	NCBI Sequence Viewer
	XP_013372171	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_013372171 ⟸ XM_013516717

- Peptide Label:

isoform X4

- Sequence:

show sequence

MAVLEITLAIILTLLALAILAILLTRWTRRRQNEMYMSRYSSEQSFRLLDYEDGTGSSSRRPKK
GRGCRQPYLTESEDSRGKYTPSASSGGLSRSSIALSRSNTGEAQHLKATQPLSSTPGSITGAIG
PIMQFSAPIPGATGPIKLSQKTIVQTPGPIAEPPPSTFTDSSSTPSSAKPEKSAKKQEPTHVAV
PIITPIPIAIAPVAALDAFGKIVILPGYVDEELTKKSSIKAQPPKHREMTESKETLKKEVFTDS
EDSLAIQKRESQKRAKFTELEKDKIGMEVKVKSDTEIKEQAVQVKKSQEGVPQHQEPQIKSKME
APKQPQEKESQIKEKKEEVPKAQESQVKSEMKVPQKSEAQEKKTGEEKPKETAAEQKAGGESGQ
KAQEKKSETETLKEKKAPEKKGEAETPSGEKAPEKKGEAQMPKEKKDQEKPSKEVSENKGKEGK
EKTDAKTSQSTKEKDDKNKKDEGKGKENKEAEAKDKKLSVKGKSK

hide sequence

RefSeq Acc Id:

XP_013372170 ⟸ XM_013516716

- Peptide Label:

isoform X3

- Sequence:

show sequence

MAVLEITLAIILTLLALAILAILLTRWTRRRQNEMYMSRYSSEQSFRLLDYEDGTGSSSRRPKK
GRGCRQPYLTESEDSRGKYTPSASSGGLSRSSIALSRSNTGEAQHLKATQPLSSTPGSITGAIG
PIMQFSAPIPGATGPIKLSQKTIVQTPGPIAEPPPSTFTDSSSTPSSDLSVIPTTKPEKSAKKQ
EPTHVAVPIITPIPIAIAPVAALDAFGKIVILPGYVDEELTKKSSIKAQPPKHREMTESKETLK
KEVFTDSEDSLAIQKRESQKRAKFTELEKDKIGMEVKVKSDTEIKEQAVQVKKSQEGVPQHQEP
QIKSKMEAPKQPQEKESQIKEKKEEVPKAQESQVKSEMKVPQKSEAQEKKTGEEKPKETAAEQK
AGGESGQKAQEKKSETETLKEKKAPEKKGEAETPSGEKAPEKKGEAQMPKEKKDQEKPSKEVSE
NKGKEGKEKTDAKTSQSTKEKDDKNKKDEGKGKENKEAEAKDKKLSVKGKSK

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RefSeq Acc Id:

XP_013372169 ⟸ XM_013516715

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAVLEITLAIILTLLALAILAILLTRWTRRRQNEMYMSRYSSEQSFRLLDYEDGTGSSSRRPKK
GRGCRQPYLTESEDSRGKYTPSASSGGLSRSSIALSRSNTGEAQHLKATQPLSSTPGSITGAIG
PIMQFSAPIPGATGPIKLSQKTIVQTPGPIAEPPPSTFRRSAPLAITDSSSTPSSDLSVIPTTK
PEKSAKKQEPTHVAVPIITPIPIAIAPVAALDAFGKIVILPGYVDEELTKKSSIKAQPPKHREM
TESKETLKKEVFTDSEDSLAIQKRESQKRAKFTELEKDKIGMEVKVKSDTEIKEQAVQVKKSQE
GVPQHQEPQIKSKMEAPKQPQEKESQIKEKKEEVPKAQESQVKSEMKVPQKSEAQEKKTGEEKP
KETAAEQKAGGESGQKAQEKKSETETLKEKKAPEKKGEAETPSGEKAPEKKGEAQMPKEKKDQE
KPSKEVSENKGKEGKEKTDAKTSQSTKEKDDKNKKDEGKGKENKEAEAKDKKLSVKGKSK

hide sequence

RefSeq Acc Id:

XP_013372168 ⟸ XM_013516714

- Peptide Label:

isoform X1

- Sequence:

show sequence

MAVLEITLAIILTLLALAILAILLTRWTRRRQNEMYMSRYSSEQSFRLLDYEDGTGSSSRRPKK
GRGCRQPYLTESEDSRGKYTPSASSGGLSRSSIALSRSNTGEAQHLKATQPLSSTPGSITGAIG
PIMQFSAPIPGATGPIKLSQKTIVQTPGPIVQYMGQRAPTSETTSEPPPSTFRRSAPLAITDSS
STPSSDLSVIPTTKPEKSAKKQEPTHVAVPIITPIPIAIAPVAALDAFGKIVILPGYVDEELTK
KSSIKAQPPKHREMTESKETLKKEVFTDSEDSLAIQKRESQKRAKFTELEKDKIGMEVKVKSDT
EIKEQAVQVKKSQEGVPQHQEPQIKSKMEAPKQPQEKESQIKEKKEEVPKAQESQVKSEMKVPQ
KSEAQEKKTGEEKPKETAAEQKAGGESGQKAQEKKSETETLKEKKAPEKKGEAETPSGEKAPEK
KGEAQMPKEKKDQEKPSKEVSENKGKEGKEKTDAKTSQSTKEKDDKNKKDEGKGKENKEAEAKD
KKLSVKGKSK

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Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	LOC102007696	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-08-28	Tsbp1	testis expressed basic protein 1	LOC102007696	chromosome unknown open reading frame, human C6orf10	Symbol and/or name change	5135510	APPROVED
2017-11-21	LOC102007696	chromosome unknown open reading frame, human C6orf10	LOC102017602	uncharacterized LOC102017602	Data merged from RGD:8866596	737654	PROVISIONAL
2015-08-25	LOC102007696	chromosome unknown open reading frame, human C6orf10		uncharacterized LOC102007696	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar