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Gene: Galnt9 (polypeptide N-acetylgalactosaminyltransferase 9) Chinchilla lanigera

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Symbol:

Galnt9

Name:

polypeptide N-acetylgalactosaminyltransferase 9

RGD ID:

9019577

Description:

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955482	564,913 - 616,123 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955482	564,234 - 614,630 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Galnt9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955482	564,913 - 616,123 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955482	564,234 - 614,630 (+)	NCBI	ChiLan1.0	ChiLan1.0

GALNT9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	132,196,372 - 132,329,589 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	132,196,372 - 132,329,589 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	132,680,917 - 132,906,175 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	131,246,870 - 131,256,526 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	131,347,147 - 131,356,803	NCBI
Celera	12	132,299,988 - 132,366,500 (-)	NCBI		Celera
Cytogenetic Map	12	q24.33	NCBI
HuRef	12	129,611,816 - 129,690,426 (-)	NCBI		HuRef
HuRef	12	129,565,322 - 129,574,999 (-)	NCBI		HuRef
CHM1_1	12	132,637,968 - 132,723,926 (-)	NCBI		CHM1_1
CHM1_1	12	132,501,248 - 132,510,916 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	132,247,641 - 132,380,739 (-)	NCBI		T2T-CHM13v2.0

Galnt9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	5	110,692,217 - 110,769,244 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	5	110,692,221 - 110,769,246 (+)	Ensembl		GRCm39 Ensembl
GRCm38	5	110,544,032 - 110,621,383 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	5	110,544,355 - 110,621,380 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	5	110,973,364 - 111,050,401 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	5	110,855,787 - 110,861,684 (+)	NCBI		MGSCv36	mm8
Celera	5	107,675,872 - 107,752,903 (+)	NCBI		Celera
Cytogenetic Map	5	F	NCBI
cM Map	5	53.66	NCBI

Galnt9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	12	51,710,176 - 51,788,388 (-)	NCBI		GRCr8
mRatBN7.2	12	46,050,395 - 46,128,626 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	12	46,050,413 - 46,128,578 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	12	47,226,359 - 47,304,587 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	12	47,831,847 - 47,910,224 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	12	46,892,365 - 46,970,744 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	12	52,106,506 - 52,187,205 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	12	52,106,506 - 52,187,164 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	12	53,844,763 - 53,922,179 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	12	46,195,007 - 46,273,810 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	12	46,059,177 - 46,139,571 (-)	NCBI
Celera	12	47,609,184 - 47,686,598 (-)	NCBI		Celera
Cytogenetic Map	12	q16	NCBI

GALNT9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	140,283,196 - 140,411,829 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	140,279,713 - 140,408,346 (-)	NCBI		NHGRI_mPanPan1
PanPan1.1	12	134,273,671 - 134,398,185 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	134,273,671 - 134,398,185 (-)	Ensembl	panpan1.1		panPan2

GALNT9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	26	702,187 - 781,243 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	26	702,057 - 777,942 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	26	746,058 - 825,851 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	26	762,830 - 842,633 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	26	762,834 - 839,241 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	26	701,756 - 781,520 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	26	790,414 - 870,160 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	26	721,524 - 801,303 (+)	NCBI		UU_Cfam_GSD_1.0

Galnt9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	122,325,276 - 122,391,089 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936660	2,331,318 - 2,395,803 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GALNT9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	23,105,728 - 23,228,528 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	23,118,148 - 23,228,530 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	24,538,381 - 24,613,201 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GALNT9
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	127,577,969 - 127,698,902 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	127,577,861 - 127,698,883 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	117,178,639 - 117,366,842 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Galnt9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624747	27,828,895 - 27,879,540 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624747	27,832,331 - 27,879,470 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005402959	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013503535	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01057177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01057178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01057179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01379442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000025423 ⟹ ENSCLAP00000025177

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955482	564,913 - 616,123 (+)	Ensembl

RefSeq Acc Id:

XM_005402959 ⟹ XP_005403016

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955482	564,927 - 614,630 (+)	NCBI

Sequence:

show sequence

CCCGCGGGGAGGCGGCCCCGGCCGCGCCTTGCCCATGGCGGTGGCCAGGAGGATCAAAACTTTG
CTGACGGTCAACATCCTGGTGTTCGTGGGCATTGTGCTGTTCTCCGTGTACTGCCGCCTGCAGG
CCCGCTCCGAGGCGCTGGTGCAGGTCGTGCGCGCTGCCGACCGCCGGGTGCGCAACCGGCTCAG
CAAGGCCGGCGCGCTGGCCGACCGCGAGGCCATCCTACAGCGCCTGGACCACCTGGAGGAGGTG
GTCTACAACCAGCTTAACGGCCTCGCCAAGCCCATTGGCCTGGTGGAGGGTCCAGGAGGCCTGG
GCCAGGGTGGCATGGCTGCTGCCCTGCGTGACGACAGCCAGGAGGCGGAGGGCCGGTACGAGGA
GTACGGCTACAACGCCCAGCTCAGCGACCGCATCTCCCTGGACAGGACCATCCCTGACTACCGG
CCCAAGAGGTGCCGGCAGATGGTTTACGCGGAGGACCTGCCGCAGGTCTCAGTGGTCTTCATCT
TCGTTAACGAGGCCCTGTCGGTCATCCTGCGCTCCGTGCACAGCGTGGTCAACCACACGCCCTC
GCGGCTGCTCAAGGAGGTCATCCTGGTGGACGACAACAGTGACAATGTGGACCTCAAGTTCAGC
CTGGACCAGTACGTGCACAGGCGGTACCCGGGGCTGGTCAAGGTCGTGCGCAACAGCCGGCGGG
AGGGCCTGATCCGCGCCCGGCTGCAGGGCTGGAAGGTAGCCACCGCGCCCGTCGTCGGCTTCTT
CGATGCCCACGTGGAGTTCAACACTGGCTGGGCTGAGCCCGCCCTGGCGCGGATCCGAGAGGAC
CGGCGGCGCGTGGTCCTGCCAGCCATCGACAACATCAAGTACAGCACGTTCGAGGTGCAGCAGT
ACGCCAACGCCGCGCACGGCTACAACTGGGGCCTGTGGTGCATGTACATCATCCCTCCGCAGGA
CTGGCTGGACCGCGGGGATGAGGCCGCGCCCATCAGGACACCCGCCATGATCGGCTGCTCGTTC
GTAGTGGACCGGGAGTACTTCGGGGACATCGGCCTGCTGGACCCCGGCATGGAGGTGTATGGGG
CTGAGAACATCGAGCTGGGCATGCGGGTGTGGCAGTGCGGTGGCAGCATGGAGGTGCTGCCCTG
CTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACAACAACGACATCGACTACTACGCC
AAGCGGAACGCGCTGCGGGCCGCCGAGGTGTGGATGGACGAGTTCAAGTCCCATGTGTACATGG
CCTGGAACATCCCCATGACCAACCCGGGGGTGGACTTCGGGGACGTGTCAGAGAGGCTAGCCCT
GCGCCAGAGGCTGAAGTGCCGCAGCTTCCGGTGGTACCTGGAGAACGTGTACCCTGAGATGAGG
ATCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGCCAGTGGCTACTGCTTGG
ACCAGGGAGCAGAAGACGATGACCGGGCCATCCTGTACCCATGCCATGGCCTGTCCTCCCAGCT
CGTGCGGTATAGTGCCGACGGCCTCCTGCAGCTGGGCCCCCTGGGCTCCACCGCCTTCCTGCCT
GACTCCAAGTGTCTGGTGGACGATGGCCGGGGCCGAACTCCCGCCCTGCGCAGGTGCGAAGACG
TGGTGCGGCCCGCACAGCGGCTCTGGGACTTCACTCAGGGTGGCCCCATCGTGAGCCGGGACAC
GGGCCGCTGCCTGGAGGTGGAGGTGTCCAAAGATGCCACCTTTGGGCTGCGGCTGGTGGTGCAG
CGGTGCTCAGGGCAGAAGTGGACCATCCGGAACTGGGTCAGGCACGGGCGGCACTGACCCTCAC
CCGCCAGCCCTCACTCACGCGCGGCCCTTTGCCCCACAACCCTCAGGGCTGGGCCCTGACTCCG
CGCGTGGGGGGGCTGCCAGGCTGCAGCCTTGGTCACCGTGTTGGGTGTGGACCCCAGGGGCAGG
CAGCCCTGCCAGGGGCCTCCAGGGAGGGCGGTCGTGACGCCGAACGCGTGCCTTTTCCACGGTG
TTCCCGACGGGCTGCGTGGACGGCGCCTTCCTGCATGTGCCAAGCCCTGTACGCAGCCCACGGG
GACAGCACCTGGCCAGCCGAGGGCGAGGGCGAGGGCAGGACAGCCCTACGACCGCACGCCGCTC
TCCCACCTAAAAGGAGCAGACCCAGGCCTCGCCAGCGCCCCGGCGCCCCTGCTCAGCAGGCCCG
AGGCAGAAACCAGAGTGGCACTTGCAGCCTGGCAGCAGAGAGAGGGGAGAAAGCCCCAGAAACC
CAAAGCCGTGGGGTGGAGGCCACAACCAGACCACAGCCAAAACGCTGCGGAGACCTGCTCCTGC
CGGGCCAGGGGTGCGGGCCGGGGCGCCTGCTGGGCCAGGAGCCCCGCCTCTGCCCCACCCTCAG
CCCTGGCTCTGCTCTTGTTGCTCGCCTGACCTTGGCGGCAGGGGGTCAGTGAAGGACACCTGGC
CCCTCGCCTGTTTTTTAAATAAAGTTTTATTGGCTCACAGCCATACCCATG

hide sequence

RefSeq Acc Id:

XM_013503535 ⟹ XP_013358989

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955482	564,234 - 614,630 (+)	NCBI

Sequence:

show sequence

CCAGACCAGAGCGGAGGGCAGCCTGCTTCTCTCAGGGCCTCGCCAAGCCCATTGGCCTGGTGGA
GGGTCCAGGAGGCCTGGGCCAGGGTGGCATGGCTGCTGCCCTGCGTGACGACAGCCAGGAGGCG
GAGGGCCGGTACGAGGAGTACGGCTACAACGCCCAGCTCAGCGACCGCATCTCCCTGGACAGGA
CCATCCCTGACTACCGGCCCAAGAGGTGCCGGCAGATGGTTTACGCGGAGGACCTGCCGCAGGT
CTCAGTGGTCTTCATCTTCGTTAACGAGGCCCTGTCGGTCATCCTGCGCTCCGTGCACAGCGTG
GTCAACCACACGCCCTCGCGGCTGCTCAAGGAGGTCATCCTGGTGGACGACAACAGTGACAATG
TGGACCTCAAGTTCAGCCTGGACCAGTACGTGCACAGGCGGTACCCGGGGCTGGTCAAGGTCGT
GCGCAACAGCCGGCGGGAGGGCCTGATCCGCGCCCGGCTGCAGGGCTGGAAGGTAGCCACCGCG
CCCGTCGTCGGCTTCTTCGATGCCCACGTGGAGTTCAACACTGGCTGGGCTGAGCCCGCCCTGG
CGCGGATCCGAGAGGACCGGCGGCGCGTGGTCCTGCCAGCCATCGACAACATCAAGTACAGCAC
GTTCGAGGTGCAGCAGTACGCCAACGCCGCGCACGGCTACAACTGGGGCCTGTGGTGCATGTAC
ATCATCCCTCCGCAGGACTGGCTGGACCGCGGGGATGAGGCCGCGCCCATCAGGACACCCGCCA
TGATCGGCTGCTCGTTCGTAGTGGACCGGGAGTACTTCGGGGACATCGGCCTGCTGGACCCCGG
CATGGAGGTGTATGGGGCTGAGAACATCGAGCTGGGCATGCGGGTGTGGCAGTGCGGTGGCAGC
ATGGAGGTGCTGCCCTGCTCCCGCGTGGCCCACATCGAGCGCACCAGGAAGCCCTACAACAACG
ACATCGACTACTACGCCAAGCGGAACGCGCTGCGGGCCGCCGAGGTGTGGATGGACGAGTTCAA
GTCCCATGTGTACATGGCCTGGAACATCCCCATGACCAACCCGGGGGTGGACTTCGGGGACGTG
TCAGAGAGGCTAGCCCTGCGCCAGAGGCTGAAGTGCCGCAGCTTCCGGTGGTACCTGGAGAACG
TGTACCCTGAGATGAGGATCTACAACAACACCCTCACGTACGGAGAGGTGAGAAACAGCAAAGC
CAGTGGCTACTGCTTGGACCAGGGAGCAGAAGACGATGACCGGGCCATCCTGTACCCATGCCAT
GGCCTGTCCTCCCAGCTCGTGCGGTATAGTGCCGACGGCCTCCTGCAGCTGGGCCCCCTGGGCT
CCACCGCCTTCCTGCCTGACTCCAAGTGTCTGGTGGACGATGGCCGGGGCCGAACTCCCGCCCT
GCGCAGGTGCGAAGACGTGGTGCGGCCCGCACAGCGGCTCTGGGACTTCACTCAGGGTGGCCCC
ATCGTGAGCCGGGACACGGGCCGCTGCCTGGAGGTGGAGGTGTCCAAAGATGCCACCTTTGGGC
TGCGGCTGGTGGTGCAGCGGTGCTCAGGGCAGAAGTGGACCATCCGGAACTGGGTCAGGCACGG
GCGGCACTGACCCTCACCCGCCAGCCCTCACTCACGCGCGGCCCTTTGCCCCACAACCCTCAGG
GCTGGGCCCTGACTCCGCGCGTGGGGGGGCTGCCAGGCTGCAGCCTTGGTCACCGTGTTGGGTG
TGGACCCCAGGGGCAGGCAGCCCTGCCAGGGGCCTCCAGGGAGGGCGGTCGTGACGCCGAACGC
GTGCCTTTTCCACGGTGTTCCCGACGGGCTGCGTGGACGGCGCCTTCCTGCATGTGCCAAGCCC
TGTACGCAGCCCACGGGGACAGCACCTGGCCAGCCGAGGGCGAGGGCGAGGGCAGGACAGCCCT
ACGACCGCACGCCGCTCTCCCACCTAAAAGGAGCAGACCCAGGCCTCGCCAGCGCCCCGGCGCC
CCTGCTCAGCAGGCCCGAGGCAGAAACCAGAGTGGCACTTGCAGCCTGGCAGCAGAGAGAGGGG
AGAAAGCCCCAGAAACCCAAAGCCGTGGGGTGGAGGCCACAACCAGACCACAGCCAAAACGCTG
CGGAGACCTGCTCCTGCCGGGCCAGGGGTGCGGGCCGGGGCGCCTGCTGGGCCAGGAGCCCCGC
CTCTGCCCCACCCTCAGCCCTGGCTCTGCTCTTGTTGCTCGCCTGACCTTGGCGGCAGGGGGTC
AGTGAAGGACACCTGGCCCCTCGCCTGTTTTTTAAATAAAGTTTTATTGGCTCACAGCCATACC
CATG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005403016	(Get FASTA)	NCBI Sequence Viewer
	XP_013358989	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000025177
	ENSCLAP00000025177.1

RefSeq Acc Id:	XP_005403016 ⟸ XM_005402959
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2WBX3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAVARRIKTLLTVNILVFVGIVLFSVYCRLQARSEALVQVVRAADRRVRNRLSKAGALADREAI LQRLDHLEEVVYNQLNGLAKPIGLVEGPGGLGQGGMAAALRDDSQEAEGRYEEYGYNAQLSDRI SLDRTIPDYRPKRCRQMVYAEDLPQVSVVFIFVNEALSVILRSVHSVVNHTPSRLLKEVILVDD NSDNVDLKFSLDQYVHRRYPGLVKVVRNSRREGLIRARLQGWKVATAPVVGFFDAHVEFNTGWA EPALARIREDRRRVVLPAIDNIKYSTFEVQQYANAAHGYNWGLWCMYIIPPQDWLDRGDEAAPI RTPAMIGCSFVVDREYFGDIGLLDPGMEVYGAENIELGMRVWQCGGSMEVLPCSRVAHIERTRK PYNNDIDYYAKRNALRAAEVWMDEFKSHVYMAWNIPMTNPGVDFGDVSERLALRQRLKCRSFRW YLENVYPEMRIYNNTLTYGEVRNSKASGYCLDQGAEDDDRAILYPCHGLSSQLVRYSADGLLQL GPLGSTAFLPDSKCLVDDGRGRTPALRRCEDVVRPAQRLWDFTQGGPIVSRDTGRCLEVEVSKD ATFGLRLVVQRCSGQKWTIRNWVRHGRH hide sequence

RefSeq Acc Id:

XP_013358989 ⟸ XM_013503535

- Peptide Label:

isoform X2

- Sequence:

show sequence

MAAALRDDSQEAEGRYEEYGYNAQLSDRISLDRTIPDYRPKRCRQMVYAEDLPQVSVVFIFVNE
ALSVILRSVHSVVNHTPSRLLKEVILVDDNSDNVDLKFSLDQYVHRRYPGLVKVVRNSRREGLI
RARLQGWKVATAPVVGFFDAHVEFNTGWAEPALARIREDRRRVVLPAIDNIKYSTFEVQQYANA
AHGYNWGLWCMYIIPPQDWLDRGDEAAPIRTPAMIGCSFVVDREYFGDIGLLDPGMEVYGAENI
ELGMRVWQCGGSMEVLPCSRVAHIERTRKPYNNDIDYYAKRNALRAAEVWMDEFKSHVYMAWNI
PMTNPGVDFGDVSERLALRQRLKCRSFRWYLENVYPEMRIYNNTLTYGEVRNSKASGYCLDQGA
EDDDRAILYPCHGLSSQLVRYSADGLLQLGPLGSTAFLPDSKCLVDDGRGRTPALRRCEDVVRP
AQRLWDFTQGGPIVSRDTGRCLEVEVSKDATFGLRLVVQRCSGQKWTIRNWVRHGRH

hide sequence

Ensembl Acc Id:

ENSCLAP00000025177 ⟸ ENSCLAT00000025423

Protein Domains

Ricin B lectin

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000017287	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000025423	ENTREZGENE
	ENSCLAT00000025423.1	UniProtKB/TrEMBL
Gene3D-CATH	2.80.10.50	UniProtKB/TrEMBL
InterPro	GalNAc-T	UniProtKB/TrEMBL
	Glyco_trans_2-like	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
	Ricin_B-like_lectins	UniProtKB/TrEMBL
	Ricin_B_lectin	UniProtKB/TrEMBL
NCBI Gene	Galnt9	ENTREZGENE
PANTHER	N-ACETYLGALACTOSAMINYLTRANSFERASE	UniProtKB/TrEMBL
	POLYPEPTIDE N-ACETYLGALACTOSAMINYLTRANSFERASE 9	UniProtKB/TrEMBL
Pfam	Glycos_transf_2	UniProtKB/TrEMBL
	Ricin_B_lectin	UniProtKB/TrEMBL
PROSITE	RICIN_B_LECTIN	UniProtKB/TrEMBL
SMART	RICIN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF50370	UniProtKB/TrEMBL
	SSF53448	UniProtKB/TrEMBL
UniProt	A0A8C2WBX3	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2015-08-25	Galnt9	polypeptide N-acetylgalactosaminyltransferase 9		UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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