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Gene: Nup133 (nucleoporin 133) Chinchilla lanigera

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Symbol:

Nup133

Name:

nucleoporin 133

RGD ID:

9011890

Description:

ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); neural tube development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); epilepsy (ortholog); Galloway-Mowat Syndrome 8 (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

nuclear pore complex protein Nup133; nucleoporin 133kDa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NUP133 (nucleoporin 133)	NCBI	Ortholog
Mus musculus (house mouse):	Nup133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nup133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NUP133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NUP133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nup133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NUP133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NUP133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nup133 (nucleoporin 133)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955492	8,583,869 - 8,643,433 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955492	8,583,902 - 8,641,891 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Actin-Accumulation Myopathy (ISO)

epilepsy (ISO)

Galloway-Mowat Syndrome 8 (ISO)

gastrointestinal stromal tumor (ISO)

nephrotic syndrome type 18 (ISO)

parathyroid carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

mRNA export from nucleus (ISO)

nephron development (ISO)

neural tube development (ISO)

neurogenesis (ISO)

nuclear pore organization (ISO)

paraxial mesoderm development (ISO)

somite development (ISO)

Cellular Component

kinetochore (ISO)

nuclear envelope (ISO)

nuclear membrane (ISO)

nuclear pore (ISO)

nuclear pore outer ring (ISO)

Molecular Function

protein binding (ISO)

structural constituent of nuclear pore (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

mRNA nuclear export pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Nup133
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955492	8,583,869 - 8,643,433 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955492	8,583,902 - 8,641,891 (+)	NCBI	ChiLan1.0	ChiLan1.0

NUP133
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	229,440,259 - 229,508,341 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	229,440,259 - 229,508,341 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	229,576,006 - 229,644,088 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	227,643,667 - 227,710,711 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	225,883,778 - 225,950,823	NCBI
Celera	1	202,845,335 - 202,912,382 (-)	NCBI		Celera
Cytogenetic Map	1	q42.13	NCBI
HuRef	1	200,067,994 - 200,134,429 (-)	NCBI		HuRef
CHM1_1	1	230,849,379 - 230,916,422 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	228,818,956 - 228,887,101 (-)	NCBI		T2T-CHM13v2.0

Nup133
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	124,623,862 - 124,676,019 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	124,623,862 - 124,676,004 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	123,897,114 - 123,949,265 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	123,897,123 - 123,949,265 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	126,421,023 - 126,473,165 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	126,785,390 - 126,844,515 (-)	NCBI		MGSCv36	mm8
Celera	8	128,164,134 - 128,223,740 (-)	NCBI		Celera
Cytogenetic Map	8	E2	NCBI
cM Map	8	72.27	NCBI

Nup133
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	68,789,065 - 68,838,692 (-)	NCBI		GRCr8
mRatBN7.2	19	51,891,606 - 51,941,243 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	51,891,629 - 51,941,239 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	58,683,353 - 58,730,929 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	59,527,618 - 59,576,724 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	61,609,788 - 61,657,355 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	56,681,965 - 56,731,404 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	56,681,979 - 56,731,372 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	67,397,793 - 67,447,010 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	54,089,391 - 54,139,882 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	54,094,290 - 54,135,731 (-)	NCBI
Celera	19	51,266,261 - 51,315,801 (-)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

NUP133
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	19,703,131 - 19,770,864 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	19,895,406 - 19,964,182 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	204,985,690 - 205,053,072 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	210,017,649 - 210,084,746 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	210,017,649 - 210,084,746 (-)	Ensembl	panpan1.1		panPan2

NUP133
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	9,751,902 - 9,805,796 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	9,751,986 - 9,805,033 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	9,743,074 - 9,796,954 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	9,782,546 - 9,836,436 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	9,782,546 - 9,837,895 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	9,786,177 - 9,840,080 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	9,900,846 - 9,954,649 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	10,152,904 - 10,207,002 (+)	NCBI		UU_Cfam_GSD_1.0

Nup133
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	44,020,333 - 44,066,046 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936484	20,185,584 - 20,231,352 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936484	20,185,558 - 20,230,904 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NUP133
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	60,353,474 - 60,408,828 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	60,353,420 - 60,404,952 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	65,175,917 - 65,228,454 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NUP133
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	66,710,468 - 66,777,672 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666055	68,563,692 - 68,638,481 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nup133
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624775	19,589,372 - 19,648,884 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624775	19,589,496 - 19,647,823 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005405007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01060821	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01060822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDF01118376	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000004569 ⟹ ENSCLAP00000004484

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955492	8,583,869 - 8,643,433 (+)	Ensembl

RefSeq Acc Id:

XM_005405007 ⟹ XP_005405064

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955492	8,583,902 - 8,641,891 (+)	NCBI

Sequence:

show sequence

GCAAGTCGGCCCCGCTCTTTGGCGTCATCGCCATACGGCGCCCGGCTCTAGCTCCAACCGCTAC
ACGAGGCGCGAGGTTGTGTTTTGACGTCATCTCCCTGCGCCTTCCCACCCCTTGATTGTTCAAG
CTCACGGCGCGCAAAGACCGCCCTTCTATCTTGGACCTAGCCCTAGCTCGTTTGCTGCTGCTCT
CTTCGATCATGTTCCCAGCCATCCCTTCTCCAGGGACCCCGGGTCCCGGATCCCGAAGGGTCCC
ACTGGTCGGAATTGGGCCGAATTCAACGCCCCGTGCGCGAAGCAGGAGGGGGCAGTCCTTGGGT
TCTGCGGTCTTCTCCCCAGTGCTCTTCTCCCCGGTATCACGGCGCAGCTCTCTCAGCTCGCGAG
GAACACCTACACGGATATTACCACACCACTCTATAACTGAGTCTGTGAACTATGACGTGAAAAC
GTTTGGATCATCTCTTCCCGTTAAAGTCATGGAAGCCCTAACGTTGGCGGAGGTTGATGACCAG
CTGTCTGTCCACATTGATGAAGGCGGATGGGCTTGCCTGGTGTGCAAGGAGAAGCTCCTTGTTT
GGAAGGTCACGCTGTCCCCTGTCACCAAGCTGTCTGTTTGCAAAGAGCTTCAGCTGCCACCTAG
TGACTTCCACTGGAGCGCCGACCTGGTGGCTGTGTCTTACTCCGCTGCCTCAGGCGAAGCACAT
TCTGTTCAGGCTGTTGCTGTCATGGTTGCCACCAGAGAAGGATCTATCCGCTACTGGCCAAGCC
TGGCTGGGGAGGACACCTACACAGAGACGTTTGTGGACCTGGGGGGTGACAGGACCTGCAGTTT
CCTAACAGCAGTGCAGGGAGGGAGTTTTATCTTGGCCTCTGCAGGAAGTCAACTAATTCGGTTG
ATACCTGAAAGCTCCGGAAAGATTCATCAGCACGTCTTGCCACAGGGGCAAGGGATGCTGTCAG
GAATTGGTCGAAAGGTTTCTTCCCTTTTCGGAATTTTGTCTCCTAGTAGTGATCTCATGCTTGC
AGGTGTTCTGTGGGACGGAAGAAGGTCGAGCTTCTACAGCCTGACGAGCTCAAATGTCAATAAA
TGGGAATTGGACGATTCCTCTGAAAAGCTGACATACAGTTGGGATTTACACAGAGTTCTGAAGG
AAAATATCACTGATGCTATTTGGGGATCTGAAAGTAACTATGAAGTCATTAAAGAAGGGGTCAA
CATTCAGTATTTGGACTTGAAGCAAAACTGTGATGGGCTCCTGATTTTGGCTGCAGCGTGGCAT
CCGGCAGATAGTCCTTGCCTCCTCTATTACTCTCTGATAACAGTAGAAGATAATGGCTGCCAGA
TGTCAGATGCTGTTACTGTGGAAGTCACTCAGTATAACCCACCTTTTCAGTCTGAAGACCTAAT
TATGTGTCGGTTGATGGTCCCTGACTTCTCAAACCAGACTGCCTATCTATACACTGAAAGTGCT
GTCCATGTATGCTCCACAGGAACTGGGAAATTTTCTCTTCCTCAGGAGAAAATTGTCTTTAGTG
CACAAGGAGATGGCATTTTGGGTGCTGGCTCCTGTGGCGGTGTTCCCATCCTCTTCTCTAGAAA
CAGTGGCCTGGTGTCCATCACGTCGAGGGAAAGTGTGTCCCTCTTAGCAGAAGACGTGGAGGAG
TCCTTGGCCTCTTCAGTCACCGGACCAGGCAGTGAGAGTATGGTGTTTGAGACCACCACGAAGA
ATGAAACCATAGCACAGGAAGATAAAACAAAGCTTCTGAAAGCTGCCTTTCTGCAGTACTGTAG
GAAAGATTTGGGCCATGCTCAAATGATGGTGGATGAGCTGTTTTCTCACTCTGACTTGGATTCT
GATGCCGAACTAGACAGGGTCGTCACCCAGATCAGCGTCGACTTGATAGATGACTATCCAGCTT
CTGACCCACGGTGGGCTGAATCTGTCCCCGAAGAGGCCCCTGGTCTCAGCAACACCTCGCTGAT
CATTCTCCACCAGCTGGAAGACAAGATGAAAGCCCACTGTCTGCTCATGGACTTCCTTCACCAA
GTTGGCTTGTTTGGGCGCCTGGACACATCTCTAGTCCGAGGGACACTGATGGCAACTCGGCTGC
TGCTGTGTGAGCACGCAGAAAAGCTGTCAGCCACCATCGCTCTCAAGAACCACCACTCCCGGCT
GCCAGACCTTGTGAATGCGGCCATTCTGATTGCTCTGAACAAGAGGGAGTGTGACATCCCGGGC
AGCCTGACTCCTGCAGACGTCTTCTTTCGCGAGGTATCCCAGGTGGATACCATCTGTGAGTGTC
TGCTGGATCATGAAGAGCAAGTTCTGAGGGATGTACCGCTGGACTCTGTGGAATGGGCTGAGGT
GGCAATCAACGTCAACACTATTCTCAAGGATATACTGCAAGCTGCTAGTCACTATCGCCAAAAC
AGAAGCTCCTTGTATAGAAGAGAAGAATCACCAAGAAAAGAGCCTGAGTACATTCCATGGACAG
CTACAGGCAGTCCTGCAGGCATCCGAACAGCAATCATCCGTCAGCATGGGGTCATCCTGAAGAC
AGTTTACCCACAGGTGGACAGCCACCTCCGGAACACCTTGACAGAGCAGCTGGTCGCGCTGATT
GACTGCTTCCTGGATGGTTATGTTTCACAGTTGAAGTCCCTGGACAAGTCTAGTGATCAAGAAA
GATATGACAACCTAGAAATGGAATACCTGCAGAGAAGATCAGAACTCTTGTCTGCTCTACTCAC
ACTAGGCCAATACCCTTGTGCTGCTTCACTAGCGGAGAAGTACTGTGACTTTGACATCTTGGTA
CAGATGTGCGAGCAAATGGACAACCAGACCAGACTGCAGCGCTACATGACCCAGTTTGCTGATC
AGAATTTTTCAGACTTTCTCTTCCGTTGGTATCTGGAAAAGGGAAAACGGGGCAAATTATTATC
TCAGCCCTTGTCTCAACATGGACAGTTGGCAGATTTTTTGCAAGCTCATGAACACCTCAGCTGG
TTACATGAAATTAGTAATAAAGAATTAATAAAGGCTCATGCAACGCTTCTGAGTTTGGCAAACA
TGGAAACTCGTTACTTTGCAAAGAAAAAAACCCTTCTTGGCTTGAGTAAATTGGCTGCATTAGC
CTCAGACCTCTCAGAGGACGCGCTGCAAGAAAAAATCGAAGCCATGGCTGAGCAGGAGCGTTTC
CTGCTGCACCAGGAGACCTTGCCCGAGCAGCTGCTGGCTGAGAGAGAGCTGAGCCTCAGCGCCA
TGCCAGTGCTGACTGCACCACAGCTCATCAGCCTGTACATCTGTGATGAAAATAGAAGAGCTAA
TGAATATGATTTTAAGAAAGCTTTGGACTTGCTGGAATATATTGATGAGGAAGAAGATGTGAAT
ATAAATGACCTCAAAATGGAGATCCTTTGCAGAGCTCTGCAGAGGGATAACTGGTCTAGCTCAG
ATGGGAAAGGTGATCCAATTGAAGAGTCTAAAGGCAGTATATTTGTGAAAATCTTACAGAAACT
TTTAAAAGATGGCATTCAGCTCAGTGACTACTTGCCGGAAGTGAATGACCTGCTGCAAGCTGAT
CAACTGGGAAGCCTCAAGTCCAACCCATACTTTGAGTTTGTTTTGAAAGCAAATTATGAGTATT
ATGTCCAGGGGCAAATGTAATTTTTTGTAGAAGTAGAATTGTTTCTAAAAGTTCTTAAGTGTCC
GCTTGTAAAAATTTTAGGCCTTAAACAACTAGAAGTTTTTGTACCATTTTATAAAGTTTGCAGG
TAAGGGTTTTTTTTGGTTTGTTTGATTTTTGTTTGTTTGGTACTTGGAAGCTAATATTTAAATA
GTTATGTAACTATAATTTTGGCTTTTGGTTACATGAATTTTTTTCCTCCTTTTCGCCAGCTGAA
TTTTGTCAGCTGTTATTAAACTTGATGCCCTTTCTAATTCACTTCGTCCAGTGGGGCTGTACTT
CTTGTCCTGGTTCTGGCTGTTGGTGTGTACAAATCACTTCTAGGTCTCAAAATGTTCTTGTAAT
TTTGGAAAATTATGAGATTGCTCAAGATGGTCTCTGAAGTTGCTGTGACACTGGGTGTTGTATG
CTGATCTGGGGCACTTGACATCTGTTTAGCTCAGGGCCAGTGGGAAATACCTGTCTAGCAAGAT
AAATGTCAGATTTAACTGGCCTCTTATAAGACAAAAGAAACAAAGCAGAATGGGGCTAATTCTT
GTGGGCTTGATAACTGATTAACTTTCCTACATAAATAACGAATGGTACTAATAGAAGCACTTTA
ATGCTTAAAGTATGCATGTGGCTTCTCACCTACCCATAACTGTCCTTAATCGTACAGCACCGTG
TGAGTTACAGTCTCTCAGTCCTGGGGTTCCCTTCAGGCCCAGTGTATTTTCACAATTTTTGCTG
AGTTCTAGTTTCACCACAGTTGGCCCTAGTCACAAGCATATGTAATGCTAGAAACTGCTGTGGA
TTTTCCTAATATGGGCACTGAAAAGTGTTGTTCTCTTAAAACTTACTTGTCCTAAGCAATCATC
ACTCTGTTATCTGGCTTTCAATAAAAAGATTAGCCAGGACCACACCTGGCATATCCACACTTTG
GCCAAAGCCAGTGATTACTAACTACCTTACTCAGACAGCCGGGAAGGTCAGAAATTAAACTTGG
TGATTTGCCTGGCTTCTGAGCCCTCCCCTGGTGCCCTCTTACCTGGAGCTTCCAGTCCAGCTTT
TGACTTATTTGGAAGAATAGACTAATAGAGCTGTTTATCTTGACCAAAAAAGGAAGTTAGCAGC
CAGGGCCTTGACTTGTTTGGAAGACTATGTTAATAGAGCTGTTTCTCTTAACCAAAGAAGGAAT
TGAGGAGCTGGGTCTTCTGTTCATCAAAGAATTATGTATGACTTTGCATAAATCAAGGACTATG
GTGACTGCTGGTAACACATGACAGATTCCTTTGGGCACAGCTGAGTTCCATTGGGCCCTTGAGT
GACAGCATCAAGGTGTTGCCCTTGACTCTGAGCAAAGGGAAGGCAGCAGTAGGCATGAGCTGAC
TTGAGACGCTTGGTGGTGACTCTTTAGAGCCTTGAGAGACATGGGCCCTGATCCTGTGTGGAGC
TGAGACAAGCCTTAAGGACTGGAAGGTGTTTCTCCTCTTACCAGGGCTCTGGGCCTTGGCGGGG
GTGGGGTGGGGATGGGGTGTCTCTAAGAACAGGCTGTGGTCTGCAAGGCCGACTCACTGACTTT
GCGTCCTGCTGGTTGAAGCCTCCTCAGAAACACCTAGGCCTTACCACCTATTCCTGGGTGTTCT
GTCCTGGTAACACCTGAAGAGAAGTAAGTTGCATATTCATGTGTAAAATACCACTCATTAAATA
CCAAAGTACATTCTAAGAAGTAGTATTATGTTTAAGAAGAGGAGAAAACGAAAAACGTGTTACT
AAAGCATTTGGAATAAAATAGACCCTGTTAACTCCACCACCACCACCGCCACCCCCCACCGCCA
CAAAACTCTGGTTCCTGTTTGAAATGTATCTTAGAATGTTTTGGATTGTATGTACTTTTTCATT
TTGTAACTCGTTTTCTTCCTGAGCTATTGTGAGCACTTTTCTGCTTAATATCCCAGAGTTTTTC
AACCTTTTTCCCATTATTGCCCCTCCAAAGGAGCCCTTTTGGGTAGTTTTCCCAGTTGCCTCCC
AACCCAGTGAAAGTTCAACAGCAGCATCTACTGTGTCTTTATGTACCATGACTTTTGAGGGGTG
CAAATAAATGTAAAGGTTTTTTTTTTTTTTATTTCCTAAGAACCAGTTGTTTCCCTCTTTGACA
ATGAGTGGGTTGTTTTTGAATGAATGTTTTAAATATTTTTCAGGATATAATGTTTTGATGACTG
CCTGACACTATTGCATGGCTGTGCTATAATTTATAGCTCATGCTCAAAAATTAAAATGGAGATT
ATTGAACATTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_005405064	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000004484
	ENSCLAP00000004484.1

RefSeq Acc Id:

XP_005405064 ⟸ XM_005405007

- UniProtKB:

A0A8C2UQU0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFPAIPSPGTPGPGSRRVPLVGIGPNSTPRARSRRGQSLGSAVFSPVLFSPVSRRSSLSSRGTP
TRILPHHSITESVNYDVKTFGSSLPVKVMEALTLAEVDDQLSVHIDEGGWACLVCKEKLLVWKV
TLSPVTKLSVCKELQLPPSDFHWSADLVAVSYSAASGEAHSVQAVAVMVATREGSIRYWPSLAG
EDTYTETFVDLGGDRTCSFLTAVQGGSFILASAGSQLIRLIPESSGKIHQHVLPQGQGMLSGIG
RKVSSLFGILSPSSDLMLAGVLWDGRRSSFYSLTSSNVNKWELDDSSEKLTYSWDLHRVLKENI
TDAIWGSESNYEVIKEGVNIQYLDLKQNCDGLLILAAAWHPADSPCLLYYSLITVEDNGCQMSD
AVTVEVTQYNPPFQSEDLIMCRLMVPDFSNQTAYLYTESAVHVCSTGTGKFSLPQEKIVFSAQG
DGILGAGSCGGVPILFSRNSGLVSITSRESVSLLAEDVEESLASSVTGPGSESMVFETTTKNET
IAQEDKTKLLKAAFLQYCRKDLGHAQMMVDELFSHSDLDSDAELDRVVTQISVDLIDDYPASDP
RWAESVPEEAPGLSNTSLIILHQLEDKMKAHCLLMDFLHQVGLFGRLDTSLVRGTLMATRLLLC
EHAEKLSATIALKNHHSRLPDLVNAAILIALNKRECDIPGSLTPADVFFREVSQVDTICECLLD
HEEQVLRDVPLDSVEWAEVAINVNTILKDILQAASHYRQNRSSLYRREESPRKEPEYIPWTATG
SPAGIRTAIIRQHGVILKTVYPQVDSHLRNTLTEQLVALIDCFLDGYVSQLKSLDKSSDQERYD
NLEMEYLQRRSELLSALLTLGQYPCAASLAEKYCDFDILVQMCEQMDNQTRLQRYMTQFADQNF
SDFLFRWYLEKGKRGKLLSQPLSQHGQLADFLQAHEHLSWLHEISNKELIKAHATLLSLANMET
RYFAKKKTLLGLSKLAALASDLSEDALQEKIEAMAEQERFLLHQETLPEQLLAERELSLSAMPV
LTAPQLISLYICDENRRANEYDFKKALDLLEYIDEEEDVNINDLKMEILCRALQRDNWSSSDGK
GDPIEESKGSIFVKILQKLLKDGIQLSDYLPEVNDLLQADQLGSLKSNPYFEFVLKANYEYYVQ
GQM

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Ensembl Acc Id:

ENSCLAP00000004484 ⟸ ENSCLAT00000004569

Protein Domains

Nucleoporin Nup133/Nup155-like C-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000003189	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000004569	ENTREZGENE
	ENSCLAT00000004569.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.58.1380	UniProtKB/TrEMBL
	1.25.40.700	UniProtKB/TrEMBL
	2.130.10.10	UniProtKB/TrEMBL
InterPro	Nucleoporin_Nup133/Nup155_C	UniProtKB/TrEMBL
	Nup133-like	UniProtKB/TrEMBL
	WD40/YVTN_repeat-like_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Nup133	ENTREZGENE
PANTHER	NUCLEAR PORE COMPLEX PROTEIN NUP133	UniProtKB/TrEMBL
	PTHR13405	UniProtKB/TrEMBL
Pfam	Nucleoporin_C	UniProtKB/TrEMBL
Superfamily-SCOP	Nucleoporin domain	UniProtKB/TrEMBL
UniProt	A0A8C2UQU0	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-08-03	Nup133	nucleoporin 133		nucleoporin 133kDa	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

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