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Gene: Ccdc57 (coiled-coil domain containing 57) Chinchilla lanigera

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Symbol:

Ccdc57

Name:

coiled-coil domain containing 57

RGD ID:

8990949

Description:

INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Generalized Epilepsy (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coiled-coil domain-containing protein 57

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	954,172 - 1,060,943 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	954,473 - 1,060,703 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Generalized Epilepsy (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

centriole replication (ISO)

cilium assembly (ISO)

G2/M transition of mitotic cell cycle (ISO)

microtubule nucleation (ISO)

positive regulation of mitotic cell cycle (ISO)

Cellular Component

centriolar satellite (ISO)

centriole (ISO)

centrosome (ISO)

spindle microtubule (ISO)

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Genomics

Comparative Map Data

Ccdc57
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	954,172 - 1,060,943 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	954,473 - 1,060,703 (+)	NCBI	ChiLan1.0	ChiLan1.0

CCDC57
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	82,101,470 - 82,212,842 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	82,101,460 - 82,212,878 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	80,059,346 - 80,170,718 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,652,635 - 77,763,978 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	17	76,681,026 - 76,765,150 (-)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,459,297 - 75,569,726 (-)	NCBI		HuRef
CHM1_1	17	80,145,516 - 80,256,926 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	82,968,627 - 83,080,766 (-)	NCBI		T2T-CHM13v2.0

Ccdc57
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	120,717,355 - 120,823,703 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	120,717,355 - 120,823,698 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	120,826,529 - 120,932,926 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	120,826,529 - 120,932,872 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	120,687,856 - 120,794,186 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	120,642,632 - 120,748,962 (-)	NCBI		MGSCv36	mm8
Celera	11	132,563,033 - 132,669,559 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	84.59	NCBI

Ccdc57
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	106,591,106 - 106,694,740 (-)	NCBI		GRCr8
mRatBN7.2	10	106,092,784 - 106,196,405 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	106,092,947 - 106,196,077 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	10	110,046,012 - 110,110,775 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	110,008,603 - 110,101,872 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	109,636,840 - 109,685,510 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Rnor_5.0	10	109,687,052 - 109,699,351 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	10	104,636,552 - 104,735,896 (-)	NCBI		Celera
Cytogenetic Map	10	q32.3	NCBI

CCDC57
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	98,637,880 - 98,752,013 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	103,538,507 - 103,654,647 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	76,507,157 - 76,615,337 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	82,237,937 - 82,429,060 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	82,212,504 - 82,424,953 (-)	Ensembl	panpan1.1		panPan2

CCDC57
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	134,978 - 229,859 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	135,000 - 230,183 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	730,420 - 832,160 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	721,811 - 823,622 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	721,677 - 770,168 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	746,863 - 848,582 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	876,823 - 975,483 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	951,931 - 1,053,771 (+)	NCBI		UU_Cfam_GSD_1.0

Ccdc57
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	724,073 - 772,598 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	5,613,684 - 5,687,878 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	5,648,250 - 5,687,880 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC57
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	819,886 - 917,477 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	819,334 - 896,662 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	900,795 - 937,629 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC57
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	74,011,224 - 74,089,976 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666077	45,546,532 - 45,722,748 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc57
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	10,929,077 - 11,001,604 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	10,928,882 - 11,011,776 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013506055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013506058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01065242	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01129993	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000008040 ⟹ ENSCLAP00000007920

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955506	954,172 - 1,060,943 (+)	Ensembl

RefSeq Acc Id:

XM_013506055 ⟹ XP_013361509

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955506	954,475 - 1,060,703 (+)	NCBI

Sequence:

show sequence

TGGTCGAGTGCGCGTCTGATGTTTACCTTTTCCGTGGCCTGCGGAGAGCTGCGGAAGGAGCATC
CTGCGAACTTCCCGGTGCCTTTTCTCGAGCCCACAACGCGTTAGCCTGTTATATAGCTGCCATT
TATCCAAACGAGGAATCCACACTAGAATACCACGATCTACGATGCAGGATTTGCTGAAATCTAC
GGCCATGCTGAGCTCTGAGCAGGCCCTGAGTGAGCTGCTGATGCGCAAGGAGGAGGAGTGGCGG
GTACTGCAGGCCCAGCACAGCAGACTACAGGAGGCGGCTCTGCAGGACACTCAGCGACAGCTGG
AGGAGGCACAGGGGAAGCTGCGGCGCCTTCAGGAAGACTTCGTCTACAACCTGCAGGTGCTGGA
AGAGCGGGACCATGAGCTGGAGCGCTATGATGCTGCATTTGCCCGGGCCAGGGGGCAGGAGGAA
GCCAGGCAGGCAGAGATGAGCGAGCTCAAGGTAGAGGTGGCCAAGCTGAAGCAGGAGCTCGCCA
GAGAAGTCAGGCATGTGGTGGAGCTGCAGGAGCAGCTGCAGCTCAGGTCACAGGAGCATCGCCT
GGAGTTGGACCGCATCCACAGTGACAAGAATGATGAGATGGACCACCAGCGGGAGCAGTATGAG
AATCTGAAGTGGAGGCTGGAGAGAAAACTTGAGCAACTCGATGGTGAACTTGCTCTGCAGAGAC
AGGAGCTGCTGCTGGAATTTGAATCCAAAATGCAGAAGCAAGAGCATGAGTTCCGCCTGCAGGC
CGACAGTATGAGCAACACAGTCTTAGCCCATGAACTCAAGGTCAAACTACTGAACAAAGAGCTG
GAGGCACTGAAGGCAGCCGGAGCCCAGGCCACAGAGTGTCTGCAGAGGGCAGAGACAGCGAATG
CCGAGTTAGAGAAGAAGCTTCAGGGCTGCACTTGGGAGCTCCGGGACCTGGAAGCTGTGAAAGA
CGCCCGGATAAAAGACTTAGAGGATACCCTTCACTCCGTGCAGCTGACCAGGAAGAAAGAAGAA
GAGATGTTCAACAGGAAACATGAGGAACTTGACCGTCTGGCCAGGGAGAGAGACGCAGTGTTGG
TGGCAGTGAAGGGTGCCCACGTGGAACAGCTGCGGGAATCAGAAGCCAGGGTGCAGGAGCTGCA
GGCCCACTGTGAGAGCCTTGAGGTGCAGCTGCGCAGGGCTGAGTGGGCTCAGGCCGATGCTGCC
AAGGAGAAAGATGCCGTCATTGACAGGCTCCGGGATGAGGCAGCAGCTCTGAAAGCAGGCTGGG
ATGCCCAGGTTGCCCAAATGTCCAAGGAGGCAGTCTCCAGAGACCTCCAGACCCAGATGCTGCA
GGAAGAGGAGCTGAAACTTAAGGCTCAACTGGTCAGAACCCAGCAGGACATAGACAGGTACAAA
CAGCAGCTGTCCCAGGCTGTCGAAAGGGAACGGAACCTGGAGCGTGACCAGGTGCAGCTGGGCC
TAGACTGGCAACGGCGCTGTGATGACATTGAGAGAGACCAGATCCAGAGGTCAGAGGCCTTGAT
CCAGGGGCTGACAAAGGCCAGAGATCAGGTTGCTGCCAAGCTTCAGGAGACAGAGCAGGCCCTG
CGGGAGCAGGATGTGGTACTGAAGGCTATAACCCTGGAGCGAGACAAGGCCATGGAGGAGCTGC
AGACATGTGGGCTCCTCCCCAAACAGGAGCCACAGATATCCCTAAAGCAGCACAGAGAAGAAAT
AAGTAAAGATTTTCCATCTAGGGAGATCCAGCGGCTGCAAGAGCAGAACACAAGCTTGCGGAAT
GCTGTCGCACAGATGAGGCGGGAAATGGAAATGCTGAGCGACCGGATGCCTCCTCCTGCGCAGT
TAGCAAGGGACAGTGACGGGCCTGATCCAGGAGCCGGAGGAGACGCGGCCCCTCATTATGTTCT
GGCCCTTGAAGCCGAAGTGCAAGACCTAAAGCACAAACTGAAAGGCCTGGAAGAGCAGCTGGGA
GGCATGTGGGAGCCTGCGAGGATACCTTCGGGCCCCGATGACCCTCACCCCAGGGTCCGCTTCT
CTGCAGAGGCTGCTGGAGACTCTGTCTGTGCTGGCCAAGCATCCACTGGACTGGTGCTAAGGAA
GCTCGAAGATAGAGTGCATCTCTTGAACTTGCTGGTAATGCAGCTCAAAAAGAAGGTGAAGCAG
CAGCCCCTGGAGCTGGACACTGTGCAGCAGGAGCTTCCCAAGGAGGTACACCAGGTGCACCTGG
AGGTCCTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTTGGGACAGCCCGGCAAGA
CCAAGGGGAGCCTTCAGACAGGAAGTCACTCAGAAAAGAGGGCCTCGCAGCGGGGGTGCCCGTG
GGAACTGAGGACCAGGAGTCGCTCTCCAGGCACCCACAGCCCAGAGCACAGCCCCCACAATCTG
CATCTGTGCCCCACCTGCAGCGGAAACTCAAGGAAGCCACCAGGAAGATCCTCAGCCTCCACCT
GCAGAGGGAGCAGCTCATCGAGATGGGGAACCGGTTGCGTGCTGAGCTGGGCCACTCCAAAGGG
AGACTGCCTCGATGTTCCCTACCTCCTGGCCCTGAGACCCTGGACCCAGGTGATGCACCCACGG
AGCCCTGGGAACCTCTGGGACAGTTACCACCCCACCTAGCAGCCCAGGACCTGAAACTCCCCAC
GACAGAGTGGGTTCCTGGCCATGGGAGAAGGAGCCCGCCTAGCTCAGCACAGCCCATCAGCAGA
AACCCTGCCCTAAGAGGCTCCACAGCAGGCCCCACGGCGGGGCCCAAGCAGAGGCAACACAGAA
TCCCCATGGTGATCTGCAAATCAAGCCATCAGAAAGAAAATAGGGCCCCAAAGCCACCCCAGGT
GCAAGCAGCCCCAGAGAAAAATGGCCATGAGAGCCTCGGATCATCCTCGCTGACCAACCATTCC
CTCCAGGATACCTGGAGGTTGCTGGACCTGAGCTCTAGCCCTTCCGGCCTACCCTCCCAGGATG
AGTCGACTCCAGAAGGAGGCCACACATCATTACATAAAAGAGTAAGCTCCAGTGACTGGAACAG
AGAGGTTGGTTTCACAAAGAACCTGAAGAAAGAAAACCAAAGCGCACCCCGCGTGGGGGTTCCA
GAGTTACTTTCCTTTAAGACAGAACAGGAAGACAGGGAAGAACAAGAGAGGCATGATGACTTCT
CAGGACAGAAATCTGCCTTGTGTTCTGATAAATGTGACCTAAGAAATGCCCACAGCATGCTGGG
CATGGTGGTGCACTCCTGTGATCCCAGCTCTCAGAAGGCTGAGGCAGGAGGATCCAGAGCCCAA
GTCCTGCCTGGACAACTTAAGTCCCCAGCACCTCCAACAGCCCACAGCCACCAGGAAGCTGAAG
GGAGCCCTGTTAGGATGCCATTTCTGGAGACCTTGGCCATTGAGGGGATGAAGATGGCAGCACA
GTCAAGGAGCAGACCCACCAGATCCTCCACCTCTCATTCTGCAAGACCTAAAAGCTGCCAGCTG
CATCCCCGGATCCGCAACTACAACATGAAGGACTGACTTCTTTGGCTCCTTGACACAGTGGACC
CACAAGGGCCAGGAATTGGGACTGTGCTTTTCCCTCCACATCAAGGGTGGGTGCACACGTGGCA
TGTAGTGGGGCTCGAGAGCTGCAAGGCAGGCTCCCAGATACTGCTGAGACGGCCTCCTTAGAGG
ATCACAGAGCTATTAAAACCTCTCTGCCACA

hide sequence

RefSeq Acc Id:

XM_013506056 ⟹ XP_013361510

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955506	954,478 - 1,060,703 (+)	NCBI

Sequence:

show sequence

TCGAGTGCGCGTCTGATGTTTACCTTTTCCGTGGCCTGCGGAGAGCTGCGGAAGGAGCATCCTG
CGAACTTCCCGGTGCCTTTTCTCGAGCCCACAACGCGTTAGCCTGTTATATAGCTGCCATTTAT
CCAAACGAGGAATCCACACTAGAATACCACGATCTACGATGCAGGATTTGCTGAAATCTACGGC
CATGCTGAGCTCTGAGCAGGCCCTGAGTGAGCTGCTGATGCGCAAGGAGGAGGAGTGGCGGGTA
CTGCAGGCCCAGCACAGCAGACTACAGGAGGCGGCTCTGCAGGACACTCAGCGACAGCTGGAGG
AGGCACAGGGGAAGCTGCGGCGCCTTCAGGAAGACTTCGTCTACAACCTGCAGGTGCTGGAAGA
GCGGGACCATGAGCTGGAGCGCTATGATGCTGCATTTGCCCGGGCCAGGGGGCAGGAGGAAGCC
AGGCAGGCAGAGATGAGCGAGCTCAAGGTAGAGGTGGCCAAGCTGAAGCAGGAGCTCGCCAGAG
AAGTCAGGCATGTGGTGGAGCTGCAGGAGCAGCTGCAGCTCAGGTCACAGGAGCATCGCCTGGA
GTTGGACCGCATCCACAGTGACAAGAATGATGAGATGGACCACCAGCGGGAGCAGTATGAGAAT
CTGAAGTGGAGGCTGGAGAGAAAACTTGAGCAACTCGATGGTGAACTTGCTCTGCAGAGACAGG
AGCTGCTGCTGGAATTTGAATCCAAAATGCAGAAGCAAGAGCATGAGTTCCGCCTGCAGGCCGA
CAGTATGAGCAACACAGTCTTAGCCCATGAACTCAAGGTCAAACTACTGAACAAAGAGCTGGAG
GCACTGAAGGCAGCCGGAGCCCAGGCCACAGAGTGTCTGCAGAGGGCAGAGACAGCGAATGCCG
AGTTAGAGAAGAAGCTTCAGGGCTGCACTTGGGAGCTCCGGGACCTGGAAGCTGTGAAAGACGC
CCGGATAAAAGACTTAGAGGATACCCTTCACTCCGTGCAGCTGACCAGGAAGAAAGAAGAAGAG
ATGTTCAACAGGAAACATGAGGAACTTGACCGTCTGGCCAGGGAGAGAGACGCAGTGTTGGTGG
CAGTGAAGGGTGCCCACGTGGAACAGCTGCGGGAATCAGAAGCCAGGGTGCAGGAGCTGCAGGC
CCACTGTGAGAGCCTTGAGGTGCAGCTGCGCAGGGCTGAGTGGGCTCAGGCCGATGCTGCCAAG
GAGAAAGATGCCGTCATTGACAGGCTCCGGGATGAGGCAGCAGCTCTGAAAGCAGGCTGGGATG
CCCAGGTTGCCCAAATGTCCAAGGAGGCAGTCTCCAGAGACCTCCAGACCCAGATGCTGCAGGA
AGAGGAGCTGAAACTTAAGGCTCAACTGGTCAGAACCCAGCAGGACATAGACAGGTACAAACAG
CAGCTGTCCCAGGCTGTCGAAAGGGAACGGAACCTGGAGCGTGACCAGGTGCAGCTGGGCCTAG
ACTGGCAACGGCGCTGTGATGACATTGAGAGAGACCAGATCCAGAGGTCAGAGGCCTTGATCCA
GGGGCTGACAAAGGCCAGAGATCAGGTTGCTGCCAAGCTTCAGGAGACAGAGCAGGCCCTGCGG
GAGCAGGATGTGGTACTGAAGGCTATAACCCTGGAGCGAGACAAGGCCATGGAGGAGCTGCAGA
CATGTGGGCTCCTCCCCAAACAGGAGCCACAGATATCCCTAAAGCAGCACAGAGAAGAAATAAG
TAAAGATTTTCCATCTAGGGAGATCCAGCGGCTGCAAGAGCAGAACACAAGCTTGCGGAATGCT
GTCGCACAGATGAGGCGGGAAATGGAAATGCTGAGCGACCGGATGCCTCCTCCTGCGCAGTTAG
CAAGGGACAGTGACGGGCCTGATCCAGGAGCCGGAGGAGACGCGGCCCCTCATTATGTTCTGGC
CCTTGAAGCCGAAGTGCAAGACCTAAAGCACAAACTGAAAGGCCTGGAAGAGCAGCTGGGAGGC
ATGTGGGAGCCTGCGAGGATACCTTCGGGCCCCGATGACCCTCACCCCAGGGTCCGCTTCTCTG
CAGAGGCTGCTGGAGACTCTGTCTGTGCTGGCCAAGCATCCACTGGACTGGTGCTAAGGAAGCT
CGAAGATAGAGTGCATCTCTTGAACTTGCTGGTAATGCAGCTCAAAAAGAAGGTGAAGCAGCAG
CCCCTGGAGCTGGACACTGTGCAGCAGGAGCTTCCCAAGGAGGTACACCAGGTGCACCTGGAGG
TCCTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTTGGGACAGCCCGGCAAGACCA
AGGGGAGCCTTCAGACAGGAAGTCACTCAGAAAAGAGGGCCTCGCAGCGGGGGTGCCCGTGGGA
ACTGAGGACCAGGAGTCGCTCTCCAGGCACCCACAGCCCAGAGCACAGCCCCCACAATCTGCAT
CTGTGCCCCACCTGCAGCGGAAACTCAAGGAAGCCACCAGGAAGATCCTCAGCCTCCACCTGCA
GAGGGAGCAGCTCATCGAGATGGGGAACCGGTTGCGTGCTGAGCTGGGCCACTCCAAAGGGAGA
CTGCCTCGATGTTCCCTACCTCCTGGCCCTGAGACCCTGGACCCAGGTGATGCACCCACGGAGC
CCTGGGAACCTCTGGGACAGTTACCACCCCACCTAGCAGCCCAGGACCTGAAACTCCCCACGAC
AGAGTGGGTTCCTGGCCATGGGAGAAGGAGCCCGCCTAGCTCAGCACAGCCCATCAGCAGAAAC
CCTGCCCTAAGAGGCTCCACAGCAGGCCCCACGGCGGGGCCCAAGCAGAGGCAACACAGAATCC
CCATGGTGATCTGCAAATCAAGCCATCAGAAAGAAAATAGGGCCCCAAAGCCACCCCAGGTGCA
AGCAGCCCCAGAGAAAAATGGCCATGAGAGCCTCGGATCATCCTCGCTGACCAACCATTCCCTC
CAGGATACCTGGAGGTTGCTGGACCTGAGCTCTAGCCCTTCCGGCCTACCCTCCCAGGATGAGT
CGACTCCAGAGTCCCCAGCACCTCCAACAGCCCACAGCCACCAGGAAGCTGAAGGGAGCCCTGT
TAGGATGCCATTTCTGGAGACCTTGGCCATTGAGGGGATGAAGATGGCAGCACAGTCAAGGAGC
AGACCCACCAGATCCTCCACCTCTCATTCTGCAAGACCTAAAAGCTGCCAGCTGCATCCCCGGA
TCCGCAACTACAACATGAAGGACTGACTTCTTTGGCTCCTTGACACAGTGGACCCACAAGGGCC
AGGAATTGGGACTGTGCTTTTCCCTCCACATCAAGGGTGGGTGCACACGTGGCATGTAGTGGGG
CTCGAGAGCTGCAAGGCAGGCTCCCAGATACTGCTGAGACGGCCTCCTTAGAGGATCACAGAGC
TATTAAAACCTCTCTGCCACA

hide sequence

RefSeq Acc Id:

XM_013506057 ⟹ XP_013361511

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955506	954,476 - 1,036,925 (+)	NCBI

Sequence:

show sequence

GGTCGAGTGCGCGTCTGATGTTTACCTTTTCCGTGGCCTGCGGAGAGCTGCGGAAGGAGCATCC
TGCGAACTTCCCGGTGCCTTTTCTCGAGCCCACAACGCGTTAGCCTGTTATATAGCTGCCATTT
ATCCAAACGAGGAATCCACACTAGAATACCACGATCTACGATGCAGGATTTGCTGAAATCTACG
GCCATGCTGAGCTCTGAGCAGGCCCTGAGTGAGCTGCTGATGCGCAAGGAGGAGGAGTGGCGGG
TACTGCAGGCCCAGCACAGCAGACTACAGGAGGCGGCTCTGCAGGACACTCAGCGACAGCTGGA
GGAGGCACAGGGGAAGCTGCGGCGCCTTCAGGAAGACTTCGTCTACAACCTGCAGGTGCTGGAA
GAGCGGGACCATGAGCTGGAGCGCTATGATGCTGCATTTGCCCGGGCCAGGGGGCAGGAGGAAG
CCAGGCAGGCAGAGATGAGCGAGCTCAAGGTAGAGGTGGCCAAGCTGAAGCAGGAGCTCGCCAG
AGAAGTCAGGCATGTGGTGGAGCTGCAGGAGCAGCTGCAGCTCAGGTCACAGGAGCATCGCCTG
GAGTTGGACCGCATCCACAGTGACAAGAATGATGAGATGGACCACCAGCGGGAGCAGTATGAGA
ATCTGAAGTGGAGGCTGGAGAGAAAACTTGAGCAACTCGATGGTGAACTTGCTCTGCAGAGACA
GGAGCTGCTGCTGGAATTTGAATCCAAAATGCAGAAGCAAGAGCATGAGTTCCGCCTGCAGGCC
GACAGTATGAGCAACACAGTCTTAGCCCATGAACTCAAGGTCAAACTACTGAACAAAGAGCTGG
AGGCACTGAAGGCAGCCGGAGCCCAGGCCACAGAGTGTCTGCAGAGGGCAGAGACAGCGAATGC
CGAGTTAGAGAAGAAGCTTCAGGGCTGCACTTGGGAGCTCCGGGACCTGGAAGCTGTGAAAGAC
GCCCGGATAAAAGACTTAGAGGATACCCTTCACTCCGTGCAGCTGACCAGGAAGAAAGAAGAAG
AGATGTTCAACAGGAAACATGAGGAACTTGACCGTCTGGCCAGGGAGAGAGACGCAGTGTTGGT
GGCAGTGAAGGGTGCCCACGTGGAACAGCTGCGGGAATCAGAAGCCAGGGTGCAGGAGCTGCAG
GCCCACTGTGAGAGCCTTGAGGTGCAGCTGCGCAGGGCTGAGTGGGCTCAGGCCGATGCTGCCA
AGGAGAAAGATGCCGTCATTGACAGGCTCCGGGATGAGGCAGCAGCTCTGAAAGCAGGCTGGGA
TGCCCAGGTTGCCCAAATGTCCAAGGAGGCAGTCTCCAGAGACCTCCAGACCCAGATGCTGCAG
GAAGAGGAGCTGAAACTTAAGGCTCAACTGGTCAGAACCCAGCAGGACATAGACAGGTACAAAC
AGCAGCTGTCCCAGGCTGTCGAAAGGGAACGGAACCTGGAGCGTGACCAGGTGCAGCTGGGCCT
AGACTGGCAACGGCGCTGTGATGACATTGAGAGAGACCAGATCCAGAGGTCAGAGGCCTTGATC
CAGGGGCTGACAAAGGCCAGAGATCAGGTTGCTGCCAAGCTTCAGGAGACAGAGCAGGCCCTGC
GGGAGCAGGATGTGGTACTGAAGGCTATAACCCTGGAGCGAGACAAGGCCATGGAGGAGCTGCA
GACATGTGGGCTCCTCCCCAAACAGGAGCCACAGATATCCCTAAAGCAGCACAGAGAAGAAATA
AGTAAAGATTTTCCATCTAGGGAGATCCAGCGGCTGCAAGAGCAGAACACAAGCTTGCGGAATG
CTGTCGCACAGATGAGGCGGGAAATGGAAATGCTGAGCGACCGGATGCCTCCTCCTGCGCAGTT
AGCAAGGGACAGTGACGGGCCTGATCCAGGAGCCGGAGGAGACGCGGCCCCTCATTATGTTCTG
GCCCTTGAAGCCGAAGTGCAAGACCTAAAGCACAAACTGAAAGGCCTGGAAGAGCAGCTGGGAG
GCATGTGGGAGCCTGCGAGGATACCTTCGGGCCCCGATGACCCTCACCCCAGGGTCCGCTTCTC
TGCAGAGGCTGCTGGAGACTCTGTCTGTGCTGGCCAAGCATCCACTGGACTGGTGCTAAGGAAG
CTCGAAGATAGAGTGCATCTCTTGAACTTGCTGGTAATGCAGCTCAAAAAGAAGGTGAAGCAGC
AGCCCCTGGAGCTGGACACTGTGCAGCAGGAGCTTCCCAAGGAGGTACACCAGGTGCACCTGGA
GGTCCTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTTGGGACAGCCCGGCAAGAC
CAAGGGGAGCCTTCAGACAGGAAGTCACTCAGAAAAGAGGGCCTCGCAGCGGGGGTGCCCGTGG
GAACTGAGGACCAGGAGTCGCTCTCCAGGCACCCACAGCCCAGAGCACAGCCCCCACAATCTGC
ATCTGTGCCCCACCTGCAGCGGAAACTCAAGGAAGCCACCAGGAAGATCCTCAGCCTCCACCTG
CAGAGGGAGCAGCTCATCGAGATGGGGAACCGGTTGCGTGCTGAGCTGGGCCACTCCAAAGGGA
GACTGCCTCGATGTTCCCTACCTCCTGGCCCTGAGACCCTGGACCCAGGTGATGCACCCACGGA
GCCCTGGGAACCTCTGGGACAGTTACCACCCCACCTAGCAGCCCAGGACCTGAAACTCCCCACG
ACAGAGTGGGTTCCTGGCCATGGGAGAAGGAGCCCGCCTAGCTCAGCACAGCCCATCAGCAGAA
ACCCTGCCCTAAGAGGCTCCACAGCAGGCCCCACGGCGGGGCCCAAGCAGAGGCAACACAGAAT
CCCCATGGTGATCTGCAAATCAAGCCATCAGAAAGAAAATAGGGCCCCAAAGCCACCCCAGGTG
CAAGCAGCCCCAGAGAAAAATGGCCATGAGAGCCTCGGATCATCCTCGCTGACCAACCATTCCC
TCCAGGATACCTGGAGGTTGCTGGACCTGAGCTCTAGCCCTTCCGGCCTACCCTCCCAGGATGA
GTCGACTCCAGGAAGAACAAGAGAGGCATGATGACTTCTCAGGACAGAAATCTGCCTTGTGTTC
TGATAAATGTGACCTAAGAAATGCCCACAGCATGCTGGGCATGGTGGTGCACTCCTGTGAT

hide sequence

RefSeq Acc Id:

XM_013506058 ⟹ XP_013361512

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955506	954,473 - 1,024,153 (+)	NCBI

Sequence:

show sequence

ACTGGTCGAGTGCGCGTCTGATGTTTACCTTTTCCGTGGCCTGCGGAGAGCTGCGGAAGGAGCA
TCCTGCGAACTTCCCGGTGCCTTTTCTCGAGCCCACAACGCGTTAGCCTGTTATATAGCTGCCA
TTTATCCAAACGAGGAATCCACACTAGAATACCACGATCTACGATGCAGGATTTGCTGAAATCT
ACGGCCATGCTGAGCTCTGAGCAGGCCCTGAGTGAGCTGCTGATGCGCAAGGAGGAGGAGTGGC
GGGTACTGCAGGCCCAGCACAGCAGACTACAGGAGGCGGCTCTGCAGGACACTCAGCGACAGCT
GGAGGAGGCACAGGGGAAGCTGCGGCGCCTTCAGGAAGACTTCGTCTACAACCTGCAGGTGCTG
GAAGAGCGGGACCATGAGCTGGAGCGCTATGATGCTGCATTTGCCCGGGCCAGGGGGCAGGAGG
AAGCCAGGCAGGCAGAGATGAGCGAGCTCAAGGTAGAGGTGGCCAAGCTGAAGCAGGAGCTCGC
CAGAGAAGTCAGGCATGTGGTGGAGCTGCAGGAGCAGCTGCAGCTCAGGTCACAGGAGCATCGC
CTGGAGTTGGACCGCATCCACAGTGACAAGAATGATGAGATGGACCACCAGCGGGAGCAGTATG
AGAATCTGAAGTGGAGGCTGGAGAGAAAACTTGAGCAACTCGATGGTGAACTTGCTCTGCAGAG
ACAGGAGCTGCTGCTGGAATTTGAATCCAAAATGCAGAAGCAAGAGCATGAGTTCCGCCTGCAG
GCCGACAGTATGAGCAACACAGTCTTAGCCCATGAACTCAAGGTCAAACTACTGAACAAAGAGC
TGGAGGCACTGAAGGCAGCCGGAGCCCAGGCCACAGAGTGTCTGCAGAGGGCAGAGACAGCGAA
TGCCGAGTTAGAGAAGAAGCTTCAGGGCTGCACTTGGGAGCTCCGGGACCTGGAAGCTGTGAAA
GACGCCCGGATAAAAGACTTAGAGGATACCCTTCACTCCGTGCAGCTGACCAGGAAGAAAGAAG
AAGAGATGTTCAACAGGAAACATGAGGAACTTGACCGTCTGGCCAGGGAGAGAGACGCAGTGTT
GGTGGCAGTGAAGGGTGCCCACGTGGAACAGCTGCGGGAATCAGAAGCCAGGGTGCAGGAGCTG
CAGGCCCACTGTGAGAGCCTTGAGGTGCAGCTGCGCAGGGCTGAGTGGGCTCAGGCCGATGCTG
CCAAGGAGAAAGATGCCGTCATTGACAGGCTCCGGGATGAGGCAGCAGCTCTGAAAGCAGGCTG
GGATGCCCAGGTTGCCCAAATGTCCAAGGAGGCAGTCTCCAGAGACCTCCAGACCCAGATGCTG
CAGGAAGAGGAGCTGAAACTTAAGGCTCAACTGGTCAGAACCCAGCAGGACATAGACAGGTACA
AACAGCAGCTGTCCCAGGCTGTCGAAAGGGAACGGAACCTGGAGCGTGACCAGGTGCAGCTGGG
CCTAGACTGGCAACGGCGCTGTGATGACATTGAGAGAGACCAGATCCAGAGGTCAGAGGCCTTG
ATCCAGGGGCTGACAAAGGCCAGAGATCAGGTTGCTGCCAAGCTTCAGGAGACAGAGCAGGCCC
TGCGGGAGCAGGATGTGGTACTGAAGGCTATAACCCTGGAGCGAGACAAGGCCATGGAGGAGCT
GCAGACATGTGGGCTCCTCCCCAAACAGGAGCCACAGATATCCCTAAAGCAGCACAGAGAAGAA
ATAAGTAAAGATTTTCCATCTAGGGAGATCCAGCGGCTGCAAGAGCAGAACACAAGCTTGCGGA
ATGCTGTCGCACAGATGAGGCGGGAAATGGAAATGCTGAGCGACCGGATGCCTCCTCCTGCGCA
GTTAGCAAGGGACAGTGACGGGCCTGATCCAGGAGCCGGAGGAGACGCGGCCCCTCATTATGTT
CTGGCCCTTGAAGCCGAAGTGCAAGACCTAAAGCACAAACTGAAAGGCCTGGAAGAGCAGCTGG
GAGGCATGTGGGAGCCTGCGAGGATACCTTCGGGCCCCGATGACCCTCACCCCAGGGTCCGCTT
CTCTGCAGAGGCTGCTGGAGACTCTGTCTGTGCTGGCCAAGCATCCACTGGACTGGTGCTAAGG
AAGCTCGAAGATAGAGTGCATCTCTTGAACTTGCTGGTAATGCAGCTCAAAAAGAAGGTGAAGC
AGCAGCCCCTGGAGCTGGACACTGTGCAGCAGGAGCTTCCCAAGGAGGTACACCAGGTGCACCT
GGAGGTCCTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTTGGGACAGCCCGGCAA
GACCAAGGGGAGCCTTCAGACAGGAAGTCACTCAGAAAAGAGGGCCTCGCAGCGGGGGTGCCCG
TGGGAACTGAGGACCAGGAGTCGCTCTCCAGGCACCCACAGCCCAGAGCACAGCCCCCACAATC
TGCATCTGTGCCCCACCTGCAGCGGAAACTCAAGGAAGCCACCAGGAAGATCCTCAGCCTCCAC
CTGCAGAGGGAGCAGCTCATCGAGATGGGGAACCGGTTGCGTGCTGAGCTGGGCCACTCCAAAG
AAGTTTCAAAGTTGGGAAGGCGTGGTGGTGCAGGCCTGCAATCCCAGCCACTGGGAGACTGAGA
CAGGAGGATTGCTGTGAATTTG

hide sequence

Protein Sequences


Protein RefSeqs	XP_013361509	(Get FASTA)	NCBI Sequence Viewer
	XP_013361510	(Get FASTA)	NCBI Sequence Viewer
	XP_013361511	(Get FASTA)	NCBI Sequence Viewer
	XP_013361512	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000007920
	ENSCLAP00000007920.1

RefSeq Acc Id:

XP_013361512 ⟸ XM_013506058

- Peptide Label:

isoform X4

- Sequence:

show sequence

MQDLLKSTAMLSSEQALSELLMRKEEEWRVLQAQHSRLQEAALQDTQRQLEEAQGKLRRLQEDF
VYNLQVLEERDHELERYDAAFARARGQEEARQAEMSELKVEVAKLKQELAREVRHVVELQEQLQ
LRSQEHRLELDRIHSDKNDEMDHQREQYENLKWRLERKLEQLDGELALQRQELLLEFESKMQKQ
EHEFRLQADSMSNTVLAHELKVKLLNKELEALKAAGAQATECLQRAETANAELEKKLQGCTWEL
RDLEAVKDARIKDLEDTLHSVQLTRKKEEEMFNRKHEELDRLARERDAVLVAVKGAHVEQLRES
EARVQELQAHCESLEVQLRRAEWAQADAAKEKDAVIDRLRDEAAALKAGWDAQVAQMSKEAVSR
DLQTQMLQEEELKLKAQLVRTQQDIDRYKQQLSQAVERERNLERDQVQLGLDWQRRCDDIERDQ
IQRSEALIQGLTKARDQVAAKLQETEQALREQDVVLKAITLERDKAMEELQTCGLLPKQEPQIS
LKQHREEISKDFPSREIQRLQEQNTSLRNAVAQMRREMEMLSDRMPPPAQLARDSDGPDPGAGG
DAAPHYVLALEAEVQDLKHKLKGLEEQLGGMWEPARIPSGPDDPHPRVRFSAEAAGDSVCAGQA
STGLVLRKLEDRVHLLNLLVMQLKKKVKQQPLELDTVQQELPKEVHQVHLEVLELRKQVAELGK
HLGTARQDQGEPSDRKSLRKEGLAAGVPVGTEDQESLSRHPQPRAQPPQSASVPHLQRKLKEAT
RKILSLHLQREQLIEMGNRLRAELGHSKEVSKLGRRGGAGLQSQPLGD

hide sequence

RefSeq Acc Id:	XP_013361509 ⟸ XM_013506055
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C2YLQ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQDLLKSTAMLSSEQALSELLMRKEEEWRVLQAQHSRLQEAALQDTQRQLEEAQGKLRRLQEDF VYNLQVLEERDHELERYDAAFARARGQEEARQAEMSELKVEVAKLKQELAREVRHVVELQEQLQ LRSQEHRLELDRIHSDKNDEMDHQREQYENLKWRLERKLEQLDGELALQRQELLLEFESKMQKQ EHEFRLQADSMSNTVLAHELKVKLLNKELEALKAAGAQATECLQRAETANAELEKKLQGCTWEL RDLEAVKDARIKDLEDTLHSVQLTRKKEEEMFNRKHEELDRLARERDAVLVAVKGAHVEQLRES EARVQELQAHCESLEVQLRRAEWAQADAAKEKDAVIDRLRDEAAALKAGWDAQVAQMSKEAVSR DLQTQMLQEEELKLKAQLVRTQQDIDRYKQQLSQAVERERNLERDQVQLGLDWQRRCDDIERDQ IQRSEALIQGLTKARDQVAAKLQETEQALREQDVVLKAITLERDKAMEELQTCGLLPKQEPQIS LKQHREEISKDFPSREIQRLQEQNTSLRNAVAQMRREMEMLSDRMPPPAQLARDSDGPDPGAGG DAAPHYVLALEAEVQDLKHKLKGLEEQLGGMWEPARIPSGPDDPHPRVRFSAEAAGDSVCAGQA STGLVLRKLEDRVHLLNLLVMQLKKKVKQQPLELDTVQQELPKEVHQVHLEVLELRKQVAELGK HLGTARQDQGEPSDRKSLRKEGLAAGVPVGTEDQESLSRHPQPRAQPPQSASVPHLQRKLKEAT RKILSLHLQREQLIEMGNRLRAELGHSKGRLPRCSLPPGPETLDPGDAPTEPWEPLGQLPPHLA AQDLKLPTTEWVPGHGRRSPPSSAQPISRNPALRGSTAGPTAGPKQRQHRIPMVICKSSHQKEN RAPKPPQVQAAPEKNGHESLGSSSLTNHSLQDTWRLLDLSSSPSGLPSQDESTPEGGHTSLHKR VSSSDWNREVGFTKNLKKENQSAPRVGVPELLSFKTEQEDREEQERHDDFSGQKSALCSDKCDL RNAHSMLGMVVHSCDPSSQKAEAGGSRAQVLPGQLKSPAPPTAHSHQEAEGSPVRMPFLETLAI EGMKMAAQSRSRPTRSSTSHSARPKSCQLHPRIRNYNMKD hide sequence

RefSeq Acc Id:	XP_013361511 ⟸ XM_013506057
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C2YLQ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQDLLKSTAMLSSEQALSELLMRKEEEWRVLQAQHSRLQEAALQDTQRQLEEAQGKLRRLQEDF VYNLQVLEERDHELERYDAAFARARGQEEARQAEMSELKVEVAKLKQELAREVRHVVELQEQLQ LRSQEHRLELDRIHSDKNDEMDHQREQYENLKWRLERKLEQLDGELALQRQELLLEFESKMQKQ EHEFRLQADSMSNTVLAHELKVKLLNKELEALKAAGAQATECLQRAETANAELEKKLQGCTWEL RDLEAVKDARIKDLEDTLHSVQLTRKKEEEMFNRKHEELDRLARERDAVLVAVKGAHVEQLRES EARVQELQAHCESLEVQLRRAEWAQADAAKEKDAVIDRLRDEAAALKAGWDAQVAQMSKEAVSR DLQTQMLQEEELKLKAQLVRTQQDIDRYKQQLSQAVERERNLERDQVQLGLDWQRRCDDIERDQ IQRSEALIQGLTKARDQVAAKLQETEQALREQDVVLKAITLERDKAMEELQTCGLLPKQEPQIS LKQHREEISKDFPSREIQRLQEQNTSLRNAVAQMRREMEMLSDRMPPPAQLARDSDGPDPGAGG DAAPHYVLALEAEVQDLKHKLKGLEEQLGGMWEPARIPSGPDDPHPRVRFSAEAAGDSVCAGQA STGLVLRKLEDRVHLLNLLVMQLKKKVKQQPLELDTVQQELPKEVHQVHLEVLELRKQVAELGK HLGTARQDQGEPSDRKSLRKEGLAAGVPVGTEDQESLSRHPQPRAQPPQSASVPHLQRKLKEAT RKILSLHLQREQLIEMGNRLRAELGHSKGRLPRCSLPPGPETLDPGDAPTEPWEPLGQLPPHLA AQDLKLPTTEWVPGHGRRSPPSSAQPISRNPALRGSTAGPTAGPKQRQHRIPMVICKSSHQKEN RAPKPPQVQAAPEKNGHESLGSSSLTNHSLQDTWRLLDLSSSPSGLPSQDESTPGRTREA hide sequence

RefSeq Acc Id:	XP_013361510 ⟸ XM_013506056
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C2YLQ7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQDLLKSTAMLSSEQALSELLMRKEEEWRVLQAQHSRLQEAALQDTQRQLEEAQGKLRRLQEDF VYNLQVLEERDHELERYDAAFARARGQEEARQAEMSELKVEVAKLKQELAREVRHVVELQEQLQ LRSQEHRLELDRIHSDKNDEMDHQREQYENLKWRLERKLEQLDGELALQRQELLLEFESKMQKQ EHEFRLQADSMSNTVLAHELKVKLLNKELEALKAAGAQATECLQRAETANAELEKKLQGCTWEL RDLEAVKDARIKDLEDTLHSVQLTRKKEEEMFNRKHEELDRLARERDAVLVAVKGAHVEQLRES EARVQELQAHCESLEVQLRRAEWAQADAAKEKDAVIDRLRDEAAALKAGWDAQVAQMSKEAVSR DLQTQMLQEEELKLKAQLVRTQQDIDRYKQQLSQAVERERNLERDQVQLGLDWQRRCDDIERDQ IQRSEALIQGLTKARDQVAAKLQETEQALREQDVVLKAITLERDKAMEELQTCGLLPKQEPQIS LKQHREEISKDFPSREIQRLQEQNTSLRNAVAQMRREMEMLSDRMPPPAQLARDSDGPDPGAGG DAAPHYVLALEAEVQDLKHKLKGLEEQLGGMWEPARIPSGPDDPHPRVRFSAEAAGDSVCAGQA STGLVLRKLEDRVHLLNLLVMQLKKKVKQQPLELDTVQQELPKEVHQVHLEVLELRKQVAELGK HLGTARQDQGEPSDRKSLRKEGLAAGVPVGTEDQESLSRHPQPRAQPPQSASVPHLQRKLKEAT RKILSLHLQREQLIEMGNRLRAELGHSKGRLPRCSLPPGPETLDPGDAPTEPWEPLGQLPPHLA AQDLKLPTTEWVPGHGRRSPPSSAQPISRNPALRGSTAGPTAGPKQRQHRIPMVICKSSHQKEN RAPKPPQVQAAPEKNGHESLGSSSLTNHSLQDTWRLLDLSSSPSGLPSQDESTPESPAPPTAHS HQEAEGSPVRMPFLETLAIEGMKMAAQSRSRPTRSSTSHSARPKSCQLHPRIRNYNMKD hide sequence

Ensembl Acc Id:

ENSCLAP00000007920 ⟸ ENSCLAT00000008040

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005551	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000008040	ENTREZGENE
	ENSCLAT00000008040.1	UniProtKB/TrEMBL
InterPro	CCDC57	UniProtKB/TrEMBL
NCBI Gene	Ccdc57	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 57	UniProtKB/TrEMBL
	PTHR46725	UniProtKB/TrEMBL
UniProt	A0A8C2YLQ7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar