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Gene: Ephb3 (EPH receptor B3) Chinchilla lanigera

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Symbol:

Ephb3

Name:

EPH receptor B3

RGD ID:

8982520

Description:

ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Currarino syndrome (ortholog); malaria (ortholog); FOUND IN plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

ephrin type-B receptor 3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	EPHB3 (EPH receptor B3)	NCBI	Ortholog
Mus musculus (house mouse):	Ephb3 (Eph receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ephb3 (Eph receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	EPHB3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	EPHB3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ephb3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	EPHB3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	EPHB3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ephb3 (EPH receptor B3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

NCBI Annotation Information:

Annotation category: partial on reference assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	22,901,337 - 22,920,712 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	22,900,588 - 22,919,924 (-)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Currarino syndrome (ISO)

malaria (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

angiogenesis (ISO)

axon guidance (ISO)

axonal fasciculation (ISO)

cell migration (ISO)

central nervous system projection neuron axonogenesis (ISO)

corpus callosum development (ISO)

dendritic spine development (ISO)

dendritic spine morphogenesis (ISO)

digestive tract morphogenesis (ISO)

ephrin receptor signaling pathway (ISO)

positive regulation of synapse assembly (ISO)

protein autophosphorylation (ISO)

regulation of axonogenesis (ISO)

regulation of cell-cell adhesion (ISO)

retinal ganglion cell axon guidance (ISO)

roof of mouth development (ISO)

substrate adhesion-dependent cell spreading (ISO)

thymus development (ISO)

urogenital system development (ISO)

Cellular Component

plasma membrane (ISO)

Molecular Function

axon guidance receptor activity (ISO)

ephrin receptor activity (ISO)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

ephrin - ephrin receptor bidirectional signaling axis (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Ephb3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955420	22,901,337 - 22,920,712 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955420	22,900,588 - 22,919,924 (-)	NCBI	ChiLan1.0	ChiLan1.0

EPHB3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	184,561,785 - 184,582,408 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	184,561,785 - 184,582,408 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	184,279,573 - 184,300,196 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	185,762,281 - 185,782,890 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	185,762,288 - 185,782,897	NCBI
Celera	3	182,727,556 - 182,748,228 (+)	NCBI		Celera
Cytogenetic Map	3	q27.1	NCBI
HuRef	3	181,691,476 - 181,712,092 (+)	NCBI		HuRef
CHM1_1	3	184,243,646 - 184,264,249 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	187,377,272 - 187,397,899 (+)	NCBI		T2T-CHM13v2.0

Ephb3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	16	21,023,530 - 21,042,054 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	16	21,023,505 - 21,042,055 (+)	Ensembl		GRCm39 Ensembl
GRCm38	16	21,204,620 - 21,223,309 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	16	21,204,755 - 21,223,305 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	16	21,204,868 - 21,223,377 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	16	21,118,778 - 21,137,287 (+)	NCBI		MGSCv36	mm8
Celera	16	21,770,110 - 21,788,619 (+)	NCBI		Celera
Cytogenetic Map	16	B1	NCBI
cM Map	16	12.62	NCBI

Ephb3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	11	93,345,098 - 93,363,775 (-)	NCBI		GRCr8
mRatBN7.2	11	79,840,668 - 79,859,345 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	11	79,840,668 - 79,859,370 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	11	88,564,211 - 88,582,906 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	11	81,217,599 - 81,236,296 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	11	80,278,658 - 80,297,355 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	11	83,527,960 - 83,546,742 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	11	83,527,962 - 83,546,674 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	11	86,602,390 - 86,621,103 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	11	82,027,632 - 82,046,332 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	11	82,085,218 - 82,103,882 (-)	NCBI
Celera	11	78,683,234 - 78,701,933 (-)	NCBI		Celera
Cytogenetic Map	11	q23	NCBI

EPHB3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	182,440,190 - 182,460,739 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	182,445,378 - 182,465,453 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	181,604,188 - 181,624,744 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	190,093,880 - 190,104,905 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	190,089,522 - 190,104,905 (+)	Ensembl	panpan1.1		panPan2

EPHB3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	34	17,422,746 - 17,433,769 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	34	17,422,842 - 17,462,954 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	34	21,497,184 - 21,517,229 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	34	17,319,566 - 17,339,610 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	34	17,319,583 - 17,338,836 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	34	17,356,348 - 17,376,380 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	34	17,352,202 - 17,372,221 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	34	17,580,828 - 17,600,882 (+)	NCBI		UU_Cfam_GSD_1.0

Ephb3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	119,194,726 - 119,205,515 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936578	5,287,340 - 5,298,142 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936578	5,286,580 - 5,297,369 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EPHB3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	122,467,588 - 122,488,292 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	122,467,561 - 122,488,296 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	131,955,238 - 131,975,350 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EPHB3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	15	4,831,980 - 4,852,586 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	15	4,832,750 - 4,852,152 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	13,601,291 - 13,621,835 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ephb3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624730	71,965,108 - 71,982,593 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624730	71,964,337 - 71,983,021 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013513587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01021213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AGCD01021214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDI01185928	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBDJ01230601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000019076 ⟹ ENSCLAP00000018891

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955420	22,901,337 - 22,920,712 (-)	Ensembl

Ensembl Acc Id:

ENSCLAT00000019077 ⟹ ENSCLAP00000018892

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955420	22,901,337 - 22,920,474 (-)	Ensembl

RefSeq Acc Id:

XM_013513587 ⟹ XP_013369041

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955420	22,900,588 - 22,919,924 (-)	NCBI

Sequence:

show sequence

GGGGCTCTCCTTCTGATGGACAATATCGCCCCGCCCAATCTAATTCATCTTTTCGTTGGTCCCG
CCTACACCCCCGGGGGTGGGGACCTGACGGAGGTGCCGCCAACCGAACCCCAGCTGAGCGCTCT
GGAAGCCGAACCAGCTGGCCGGGCGGTCTGTGAGTGGGCGGCCGGCCTCTGGGGGCGGGACCGC
AGCGTTGACAGGCAGGCGGGCGGTCCCGCCCCTCGCGCCCAGAGCGGCAGCGCCAGCTCCGGGG
ACAGCAGAAGTGAGTACGTGAGCGGCGCAGCAAGATCCCTGCTCGGACCCCGGACGGAGCGCGC
ACCCGGAGCCCCGGAGCCCTGTCGGACCCGCGGCGAACAGCTGGATTACTGTGCAGCGCGCACC
AGGACTACCTGCGCCCTCCCGCTTCCCGGAGTCCTCGGCATCGAGCCACCCAGCGCCCCGGACC
CTCCTGGACCGGTCCGTCCAGATTCCCGCGGAACCGACCTGCCCGCATCCCCCAGGATCCTCGG
GCTCGGGGCGCCGCCTCGGTCCCGAAGCCGTCCGCGCAGATCGCACCCCCACTTCTCCCGGATC
TCCTGGGACCGTACGCCAGCCTTCCCCGTGTCCGCCGAGCGGACCCTCTCTCGGGTGCCTGCAG
CCTCGCCGGCGCGGCCCGGCGCGGCCCGGCCCGGCCTGGCGCGGCTCGGCTCGGCTCCCGGAGC
TGCCCCGGCCATGGCCCGAGCCCTCCCGCCGCCGCCACCGCCGCCGCCGCCGGGGCTTGCGCCG
CCGTTGCTCCCGCTGCTGCTTCTGTCCCTGCTGCTGCCCGCCGGCTGCCGGGCGCTGGAAGAGA
CTCTCATGGATACAAAATGGGTGACATCTGAGTTGGCGTGGACATCTCATCCAGAGAGTGGGTG
GGAGGAGGTGAGTGGCTACGACGAGGCCATGAACCCCATCCGCACCTATCAGGTGTGTAACGTG
CTCGAGTCGAGCCAGAACAACTGGCTGCGCACGGGGTTCATTTGGCGACGGGATGTGCAGCGGG
TCTACGTGGAGCTCAAGTTCACGGTGCGCGACTGCAACAGCATTCCCAACATCCCCGGCTCCTG
CAAGGAGACCTTCAACCTCTTCTACTACGAGGCTGACAGTGACGTGGCCTCGGCCTCCTCCCCG
TTCTGGATGGAGAACCCCTACATAAAAGTGGATACCATCGCGCCCGATGAGAGCTTCTCCCGGC
TGGATGCTGCCGGCCGGGTCAACACCAAGGTGCGCAGCTTCGGGCCGCTTTCCAAGGCCGGCTT
CTACTTGGCCTTCCAGGACCAGGGCGCCTGCATGTCGCTCATCTCTGTGCGCGCCTTCTACAAG
AAGTGTGCATCCACCACTGCAGGCTTCGCACTCTTCCCTGAGACCCTCACTGGGGCCGAGACCA
CCTCGCTGGTCATTGCTCCCGGCACCTGCGTTGCTAACGCCGTGGAGCTGTCGGTGCCGCTCAA
GCTGTACTGCAATGGCGATGGGGAGTGGATGGTGCCCGTGGGCGCCTGCACCTGTGCCACTGGC
CATGAGCCAGCTGTCGAGGAGTCCCAGTGCCACCCCTGTCCACCTGGGAGCTACAAGGCGAAGC
AGGGAGAGGGGCCCTGCCTCCCCTGCCCCCCCAACAGCCGCACCACCTCGCCAGCTGCCAGCAT
CTGCACGTGCCACAATAACTTCTACCGCGCAGACTCGGACACCGCAGACAGTGCCTGCACCACG
GTGCCATCTCCTCCTCGGGGTGTGATCTCCAATGTGAACGAGACCTCACTGGTCCTTGAGTGGA
GTGAGCCGCGAGACCTCGGTGGCCGCGATGACCTCCTGTATAACGTCATCTGCAAGAAGTGCCA
CGGGGGCCCAGGGACAGGGGGGCCCTCCACCTGCTCACGCTGCGATGACAACGTGGAGTTTGTG
CCTCGGCAGCTGGGCCTGACGGAGCGCCGGGTCCACATCAGCCACCTGCTGGCCCACACGCGCT
ACACTTTTGAGGTGCAGGCGGTCAACGGGGTTTCGGGCAAGAGCCCCCTGCCACCCCGCTATGC
AGCGGTGAACATCACCACCAACCAGGCTGCGCCATCTGAAGTGCCGACGCTGCGTTTGCACAGC
AGCTCGGGGAGCAGCCTGACCCTGTCCTGGGCACCCCCGGAGTGGCCCAACGGAGTCATCCTGG
ACTACGAGATGAAGTACTTCGAGAAGAACGAGGGCATTGCCTCCACCGTGACCAGCCAGAAGAA
TTCTGTGCAGCTGGATGGGCTGCGGCCCGATGCCCGCTATGTGGTCCAGGTCCGAGCCCGCACG
GTGGCCGGCTATGGCCAGTACAGCCACCCAGCTGAGTTTGAGACCACGAGTGAGAGAGGCTCCA
GTGCCCAACAGCTCCAGGAGCAGCTCCCCCTCATTGTGGGCTCTGCCACGGCTGGGCTCATCTT
CGTGGTGGCTGTCGTGGTCATTGCTGTCGTTTGCCTCAGGAAGCAGCGGCACGGCGCGGATTCG
GAGTACACGGAGAAGCTGCAGCAGTACATTGCTCCTGGAATGAAGGTTTATATCGACCCTTTCA
CCTACGAGGACCCAAACGAGGCTGTGCGGGAGTTTGCCAAGGAGATCGACGTGTCCTGCGTCAA
GATCGAGGAGGTGATTGGAGCCGGGGAGTTTGGGGAAGTGTGCCGGGGTCGGCTCAAACAGCCC
GGCCGCCGGGAGGTGTTCGTGGCCATTAAGACGCTGAAGGTGGGCTACACGGAGAGGCAGCGGC
GGGACTTCCTGAGCGAGGCCTCCATCATGGGGCAGTTTGACCACCCCAACATCATCCGGCTGGA
GGGTGTGGTCACCAAGAGCCGGCCGGTTATGATCCTCACTGAGTTCATGGAGAACTGCGCCCTG
GACTCCTTCCTGAGGCTCAACGATGGGCAGTTCACGGTCATCCAGCTGGTGGGCATGTTGCGAG
GCATTGCTGCTGGCATGAAGTACCTGTCCGAGATGAACTATGTGCACCGCGACCTGGCTGCCCG
CAACATCCTTGTCAACAGCAACCTGGTCTGCAAAGTCTCTGACTTCGGCCTCTCTCGCTTCCTG
GAGGATGACCCCTCTGATCCCACCTACACCAGCTCCCTGGGCGGGAAGATCCCGATCCGCTGGA
CTGCCCCAGAGGCCATAGCCTATCGGAAGTTCACCTCTGCCAGTGATGTCTGGAGCTATGGAAT
TGTCATGTGGGAGGTCATGAGCTATGGAGAGCGACCCTACTGGGACATGAGCAACCAAGATGTC
ATCAATGCTGTGGAGCAGGATTATAGGCTGCCACCGCCCATGGACTGTCCCACAGCACTGCATC
AGCTCATGCTGGACTGCTGGGTGAGGGACCGGAACCTCAGACCCAAATTCTCCCAGATCGTCAA
CACCCTAGACAAGCTCATCCGCAACGCCGCCAGCCTCAAGGTCATCGCCAGTGCCCAGTCTGGC
ATGTCACAGCCCCTCCTGGACCGCACAGTTCCCGATTATACAACTTTCACGACAGTAGGTGACT
GGCTAGATGCCATCAAGATGGGACGGTACAAGGAGAGCTTTGTCAATGCAGGGTTTGCGTCCTT
TGACCTGGTGGCCCAGATGACTGCAGAAGACCTGCTGCGGATCGGGGTCACCCTGGCTGGCCAC
CAGAAAAAGATCCTCAGCAGTATTCAGGACATGCGGCTGCAGATGAACCAGACGCTGCCTGTGC
AGGAAGTGTGCCCCAAACCTCTTCATATTGAAGATGGATTAGGAGAGGGAGTGATGACCTCTCC
GCAGATGCCTCGGGGCCCAGGCCTTCCTGCTCTCCAGTGGAGGGCCCCCACAACCTCAGATTTG
GCTACTTTGCAGTCCTGGGTATCCCGGCAGGGCTGAGAGGGGGGCAAGCCTGGGTTCCACAGGG
CCCAGCCCTGGCAGGGGTCTGGCCCCCCAGGTAAGCAGAGAGTAGTCCCTCCCTCAGGAACTGG
AGGAGCGGACTCCAGGAATGGGGAAATGTGACACCCCCATCCCTACACCAGTTGGCACCTCTGG
TTTGCACAGGGACTTGTTCTAGGGGCTGAGGGCCCTGCCTCCACCCCTGCCCTTGGTGCTGTCA
TAGAAGGGCAGGCGGGGCAGGCTGAAGAGCGGCCCTTTGCCCCCCAGAGACTGACTCTCAGAGC
CAGAGATGGGATGTATGTGGTGTGCGTGTGTGAGTGTGTGCGTGCACAGAGAGCGTGGGTGAGT
GTATAAAAAGCTTGGCCCTGTGCCCTGCAGTGGGGACAGCTGGGCTGACAGCGGAATAAAGGCA
ATAAGATGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_013369041	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000018891.1
	ENSCLAP00000018892.1

RefSeq Acc Id:

XP_013369041 ⟸ XM_013513587

- Sequence:

show sequence

MDNIAPPNLIHLFVGPAYTPGGGDLTEVPPTEPQLSALEAEPAGRAVCEWAAGLWGRDRSVDRQ
AGGPAPRAQSGSASSGDSRSEYVSGAARSLLGPRTERAPGAPEPCRTRGEQLDYCAARTRTTCA
LPLPGVLGIEPPSAPDPPGPVRPDSRGTDLPASPRILGLGAPPRSRSRPRRSHPHFSRISWDRT
PAFPVSAERTLSRVPAASPARPGAARPGLARLGSAPGAAPAMARALPPPPPPPPPGLAPPLLPL
LLLSLLLPAGCRALEETLMDTKWVTSELAWTSHPESGWEEVSGYDEAMNPIRTYQVCNVLESSQ
NNWLRTGFIWRRDVQRVYVELKFTVRDCNSIPNIPGSCKETFNLFYYEADSDVASASSPFWMEN
PYIKVDTIAPDESFSRLDAAGRVNTKVRSFGPLSKAGFYLAFQDQGACMSLISVRAFYKKCAST
TAGFALFPETLTGAETTSLVIAPGTCVANAVELSVPLKLYCNGDGEWMVPVGACTCATGHEPAV
EESQCHPCPPGSYKAKQGEGPCLPCPPNSRTTSPAASICTCHNNFYRADSDTADSACTTVPSPP
RGVISNVNETSLVLEWSEPRDLGGRDDLLYNVICKKCHGGPGTGGPSTCSRCDDNVEFVPRQLG
LTERRVHISHLLAHTRYTFEVQAVNGVSGKSPLPPRYAAVNITTNQAAPSEVPTLRLHSSSGSS
LTLSWAPPEWPNGVILDYEMKYFEKNEGIASTVTSQKNSVQLDGLRPDARYVVQVRARTVAGYG
QYSHPAEFETTSERGSSAQQLQEQLPLIVGSATAGLIFVVAVVVIAVVCLRKQRHGADSEYTEK
LQQYIAPGMKVYIDPFTYEDPNEAVREFAKEIDVSCVKIEEVIGAGEFGEVCRGRLKQPGRREV
FVAIKTLKVGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMILTEFMENCALDSFLR
LNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDPS
DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAVE
QDYRLPPPMDCPTALHQLMLDCWVRDRNLRPKFSQIVNTLDKLIRNAASLKVIASAQSGMSQPL
LDRTVPDYTTFTTVGDWLDAIKMGRYKESFVNAGFASFDLVAQMTAEDLLRIGVTLAGHQKKIL
SSIQDMRLQMNQTLPVQEVCPKPLHIEDGLGEGVMTSPQMPRGPGLPALQWRAPTTSDLATLQS
WVSRQG

hide sequence

Ensembl Acc Id:

ENSCLAP00000018892 ⟸ ENSCLAT00000019077

Ensembl Acc Id:

ENSCLAP00000018891 ⟸ ENSCLAT00000019076

Protein Domains

Eph LBD Fibronectin type-III Protein kinase SAM

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000012937	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000019076.1	UniProtKB/TrEMBL
	ENSCLAT00000019077.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	2.60.40.10	UniProtKB/TrEMBL
	ephrin a2 ectodomain	UniProtKB/TrEMBL
	Galactose-binding domain-like	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
	Tumor Necrosis Factor Receptor, subunit A, domain 2	UniProtKB/TrEMBL
InterPro	Eph_TM	UniProtKB/TrEMBL
	EphB3_rcpt_lig-bd	UniProtKB/TrEMBL
	Ephrin_rcpt_lig-bd_dom	UniProtKB/TrEMBL
	Ephrin_rcpt_TKs	UniProtKB/TrEMBL
	FN3_dom	UniProtKB/TrEMBL
	FN3_sf	UniProtKB/TrEMBL
	Galactose-bd-like_sf	UniProtKB/TrEMBL
	Ig-like_fold	UniProtKB/TrEMBL
	Kinase-like_dom_sf	UniProtKB/TrEMBL
	Prot_kinase_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/TrEMBL
	Ser-Thr/Tyr_kinase_cat_dom	UniProtKB/TrEMBL
	Tyr-kin_ephrin_A/B_rcpt-like	UniProtKB/TrEMBL
	Tyr_kinase_AS	UniProtKB/TrEMBL
	Tyr_kinase_cat_dom	UniProtKB/TrEMBL
	Tyr_kinase_ephrin_rcpt	UniProtKB/TrEMBL
	Tyr_kinase_rcpt_V_CS	UniProtKB/TrEMBL
NCBI Gene	Ephb3	ENTREZGENE
PANTHER	EPH RECEPTOR A5	UniProtKB/TrEMBL
	EPHRIN TYPE-B RECEPTOR 3	UniProtKB/TrEMBL
Pfam	EphA2_TM	UniProtKB/TrEMBL
	Ephrin_lbd	UniProtKB/TrEMBL
	Ephrin_rec_like	UniProtKB/TrEMBL
	fn3	UniProtKB/TrEMBL
	PK_Tyr_Ser-Thr	UniProtKB/TrEMBL
	SAM_1	UniProtKB/TrEMBL
PIRSF	TyrPK_ephrin_receptor	UniProtKB/TrEMBL
PRINTS	FNTYPEIII	UniProtKB/TrEMBL
	TYRKINASE	UniProtKB/TrEMBL
PROSITE	EPH_LBD	UniProtKB/TrEMBL
	FN3	UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_TYR	UniProtKB/TrEMBL
	RECEPTOR_TYR_KIN_V_1	UniProtKB/TrEMBL
	RECEPTOR_TYR_KIN_V_2	UniProtKB/TrEMBL
	SAM_DOMAIN	UniProtKB/TrEMBL
SMART	EPH_lbd	UniProtKB/TrEMBL
	Ephrin_rec_like	UniProtKB/TrEMBL
	FN3	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	TyrKc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47769	UniProtKB/TrEMBL
	SSF49265	UniProtKB/TrEMBL
	SSF49785	UniProtKB/TrEMBL
	SSF56112	UniProtKB/TrEMBL
UniProt	A0A8C2VPW9_CHILA	UniProtKB/TrEMBL
	A0A8C2VQ46_CHILA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Annotations - PID (archival)