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Gene: Trabd2b (TraB domain containing 2B) Chinchilla lanigera

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Symbol:

Trabd2b

Name:

TraB domain containing 2B

RGD ID:

8978269

Description:

ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); positive regulation of protein oxidation (ortholog); positive regulation of protein-containing complex assembly (ortholog); FOUND IN organelle membrane (ortholog); plasma membrane (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

metalloprotease TIKI2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

ChiLan1.0 - Chinchilla ChiLan1.0 Assembly

Position:

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	10,612,030 - 10,812,585 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	10,612,515 - 10,817,725 (+)	NCBI	ChiLan1.0	ChiLan1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of Wnt signaling pathway (ISO)

positive regulation of protein oxidation (ISO)

positive regulation of protein-containing complex assembly (ISO)

proteolysis (ISO)

Cellular Component

organelle membrane (ISO)

plasma membrane (ISO)

Molecular Function

metalloendopeptidase activity (ISO)

protein binding (ISO)

Wnt-protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Transitive Annotation Pipeline	Automated assignment of GO, PW and RDO ISO annotations across species

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Trabd2b
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	10,612,030 - 10,812,585 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	10,612,515 - 10,817,725 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRABD2B
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	47,760,528 - 47,997,385 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	47,760,528 - 47,997,385 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	48,226,200 - 48,463,057 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	48,003,896 - 48,235,839 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	46,513,002 - 46,749,292 (-)	NCBI		Celera
Cytogenetic Map	1	p33	NCBI
HuRef	1	46,343,095 - 46,579,167 (-)	NCBI		HuRef
CHM1_1	1	48,343,333 - 48,579,625 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	47,639,427 - 47,876,248 (-)	NCBI		T2T-CHM13v2.0

Trabd2b
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	114,263,394 - 114,472,295 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	114,263,921 - 114,472,295 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	114,406,682 - 114,615,098 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	114,406,724 - 114,615,098 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	114,079,329 - 114,287,703 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	113,904,620 - 114,108,672 (+)	NCBI		MGSCv36	mm8
Celera	4	113,154,874 - 113,362,877 (+)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	51.84	NCBI

Trabd2b
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	133,178,014 - 133,395,740 (+)	NCBI		GRCr8
mRatBN7.2	5	127,941,198 - 128,158,946 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	127,941,114 - 128,143,747 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	5	133,220,986 - 133,437,151 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	133,221,139 - 133,420,644 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	137,016,915 - 137,231,017 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	134,778,167 - 134,978,965 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	5	126,596,412 - 126,812,016 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

TRABD2B
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	178,819,424 - 179,055,861 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	177,960,850 - 178,197,307 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	47,055,618 - 47,292,055 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	48,566,390 - 48,800,589 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	48,571,772 - 48,799,960 (-)	Ensembl	panpan1.1		panPan2

TRABD2B
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	12,778,537 - 12,987,316 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	12,771,859 - 12,996,357 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	12,927,212 - 13,140,334 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	12,923,781 - 13,136,795 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	15	12,726,485 - 12,936,858 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	12,793,616 - 13,007,008 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	12,863,380 - 13,074,058 (+)	NCBI		UU_Cfam_GSD_1.0

Trabd2b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	62,706,640 - 62,927,944 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	28,531,931 - 28,752,736 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	28,565,563 - 28,752,370 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRABD2B
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	163,624,072 - 163,837,863 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	163,624,078 - 163,836,829 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	151,332,988 - 151,389,456 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRABD2B
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	84,932,091 - 85,162,560 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	84,932,721 - 85,157,167 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	31,928,461 - 32,158,401 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trabd2b
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624859	4,849,877 - 5,063,994 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624859	4,849,319 - 5,121,008 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005398637	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AGCD01050127	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GBCE01168317	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCLAT00000008554 ⟹ ENSCLAP00000008427

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0 Ensembl	NW_004955464	10,612,030 - 10,812,585 (+)	Ensembl

RefSeq Acc Id:

XM_005398637 ⟹ XP_005398694

Type:

CODING

Position:

Chinchilla Assembly	Chr	Position (strand)	Source
ChiLan1.0	NW_004955464	10,612,515 - 10,817,725 (+)	NCBI

Sequence:

show sequence

GCTCCCCGCGGGCCCCGGCAGGATGCACGCCGCCCTGGCGGGGCCACTGCTCGCCGCTCTCCTC
GCCACCGCCCGCGCCCGCCCGCAGCCCCCGGACGGAGGACAGTGCCGGCCGCCCGGATCGCAGA
GGGACCTGAACTCCTTCCTGTGGACTATTCGGCGCCATCCCCCAGCCTACCTGTTTGGCACCAT
CCACGTCCCTTATACCCGGGTCTGGGACTTCATCCCAGAAAACTCCAAGGCAGCCTTCCAGGCC
AGTGCCCGTGTCTACTTCGAGCTGGACCTGACGGACCCCTACACAGTCTCAGCGCTGGCCAGCT
GCCAGCTGCTGCCCCCTGGGGAGAACCTGCAGGACGTGCTTCCTCAGGAGCTCTACTGGCGCCT
GAAGCGCCACCTAGACTATGTGAAGTTGATGATGCCCTCCTGGATGACGCCCGCACAGAGGGGA
AAAGGGCTCTATGCTGACTACCTGTTCAACGCCATCGCAGGCAACTGGGAGCGCAAGAGGCCCG
TGTGGGTGATGCTCATGGTGAACTCACTCACGGAGACCGATGTGCGCTCCCGTGGAGTGCCTGT
GTTGGACCTCTACCTGGCCCAGCAAGCTGAGAAGATGAAGAAGAGCACCGGTGCTGTGGAGCGG
GTGGAGGAGCAGTGCCATCCACTCAATGGGCTCAACTTCTCTCAGGTGCTGTTTGCCCTGAACC
AGACCCTGCTGCAGCACGAGAGTGTGCGGGCTGGGAGCCTGCAGGCACCCTACACCACGGAGGA
CCTCATCAAGCACTACAACTGTGGAGACCTCAACGCTGTCATCTTCAACCATGACACATCCCAG
CTGCCCAACTTTATCAACACCACCCTCCCACCGCATGAGCAGGTGACAGCCCAGGAGATCGATA
GCTACTTCCGCCAGGAGCTCATCTACAAGAGGAACGAGCGCATGGGGAAGAGGGTCATGGCACT
GCTGCGGGAGAACGAGGACAAGATCTGCTTCTTCGCGTTTGGAGCAGGTCACTTCCTGGGGAAC
AACACTGTCATTGATGTTCTGCGGCAAGCAGGGCTAGAAGTGGACCACACACCTGCTGGGAAGG
CCATCGACAGCCCTGCTGCCAGGAGCTCAGCGCCCCCTCCAGAGGAAATTTCAGCCAGCCCAGC
CCCAGCCACCCCAGCTGCCGCCATCCCTGAAGCACCCTCAGCAACCCCCACTGCCACCCCCGAA
GAGGAGGATTCAGCCCTGTCCCCACACCTGCTGCTCCCTGACAGCCTTAGCCAGCTGGAGGAGT
TTGGGCGACAGAAGAAGTGGCACAAGAGGCAGAACAAGCACCAGCGGCCAAGGCAGTTCAACGA
CCTCTGGGTCCGAATCGAGGACAGCACCACCGCCTCGCCGCCACCACTGGCTCTCCAGCCCACC
CCCAGCTCTGGGACCGCCAAGCCCCCCTTCCAGCTCTCCGACCAGCTCCACCAACAGGACCCAA
CAGGGCCCACCAGCAGCTCCGCGCCGGCCCTGGGCCTTCTCGCTGCTGTGGCTGCCACCATTGC
CGCCCCCTTCCTGCTACACACTCTCGGGCCCTCCTGACCTCGGCCACCGTGTACAAAGAAGCCA
GAGAAACCACGTGAGGGTCTGCGGCCACCCCCGTGGCCCCCGCCTCCACCTCTGGGAGTGCCAC
CACCTCAAGGGCAGTCCAGATAGGACCCTTTAGAACACTAGAGCTTTATCATACCCAAGTTACA
TCTTCTTTTTTGTAGAAGGTCTTAATTTCCCATAGTGCTATGGGGCTCTTTTGTAAAATATGTG
TCCATATTAAAAGAGAAAAAAATGTATTTATTCTACCGATAAAACTATTTTTATGAGGCCTATA
TTGTAACCCCTGAATTAACCCTAACAGCAACCCAAAGAGGGACCCAGGTTGCCAAGACATCTAT
GACCTGTGCTGGCCCTGGCTTTGAACTGGTTTTGCTCCTGTATCTCCAGAGCCTCCTGGGTCAG
GCTTGGCTTCCCCACCATGGGGACTGCCAAGGGTGGGACAGGCAGACAGGCTTAGCTTTTGTGA
AGCTGGATTTGGGAGACAGAGGTGTGAATTGCTGCCTGTCCTCCCCTCCCTGAGATGCATCCTG
GGGCCTGGAAAGGTACATTAGGAAAGAGAATGCTGCTATTATCAACCCCTGAGCGTCTGTGAAC
TGGCCCTCCAGAGCGCTAGGTGAGTGTTTCAACCAAAGTGCAGGGGTGGGATGGGAGAGGCGAT
GCCAGGTATCAAGATAGGCAGCCCCCAGTCCCACAGAACAAACAGTTACCCTGAGATTCAGAGA
GAGCGAGGCAGGGCTGCCCAAGGTCACAGAGCAAGTGAGCAGGTAGCTCCAGGCCCCTCAGTCC
CGCTGTCATCGCTCCAGCTTGGATCAGAGGGACTGTGGAGTCGTGGCCGAGTGGAATAAGCTGG
GCCAAAGGACAGGAGTGGGCACAGAGGGCAATTCTAGGGAGAAGGGCACTAAGGGTTGCCAGTT
ACAGTAATGACAGTGTGATGAGAACACCCTGCAGTATCAGGGGGTGCTTTGCATACCCACTTCA
TCGTGGTTCTTTACACCACTGCTATGAGGTATAATGATCCCCATTTCCCATATGGGGGAAACAA
ACCCCCCATAGAGGCAGAGGGACTTGCCCAAGGTCACACAGCTTCAGGTCAGTATGATACCAAG
TGACCCTTGTGTTGTGGTCCATGTTCTGGCATATTCTCTCAGCCCAGGGCAGCTCCCACCCACC
CTGGGACCAGCTCCCAAGGCCAGCCAAAGACACTGTTCTACCAGGTACTTTTGATGTCCCTGTA
ACCAAAGGGCTCTAGCAACAGTATGTGCTGTTTTTCTGGTCCCTTAGTTTGTCACATCTTTGCT
CCAGGAGAAGCTTTCCTGCCAAATCAAAGGGTAGGTTGGGGCACTGTCTTGGAGTCCCTAAGAG
ACAGCAACCAGTGACAGAAGACAGGTAGTCAAGACTCAGCAAGACTTCATTGGTCCCTCCCCTT
CCTAGGGTGATGGCTGAAGCCCCAGGTAGGCCAGTCAAGCCCTGAACCCTCAGCTGGGCTGGTG
ACTCCCTAATTACCTACAGAGACCTAGATCCTGAGAGCAGGAAAGACCCGTCACTTAACAGATC
ATAGAAACAGTAAGGGCAATACTCAGACTCAGAGAGGGAAACCCTTCCCTAAGGCAGCACAGCT
GGGAAGCCTTCCTGACTCCAGTCAGTGCTCCTCTGCCTCACTGTACATAGGTTTCCCTGGAAAG
CTTGATGGTGCCTGATTGGCCCAAGTGCCACTAAGTGCAGCACGGCATCTGCCTTCCTGATGGA
AAGGTAGAATTCTGGGCAGTGTGTTGGATGGTCAGAGGTGCCACAAGCATCCTGGCAGGCAGCT
GAGTTCTTTCCATCTCAGCCCCAATGGACAAGTTTGAACCTGAGACCTGGCAGAAACCTGAACC
TCTACTTCAGAGGGTCTAGCCAGCCCCATGGGCACCATACTCTAAACTGAACTTGACCTCAGCT
GGGGCTGCAATCAGTTTATGCTTGGCAAAGAAAAAAATGTGACTTCCTATTTCTGAGCAGGACA
GGACTTCGTTGACTTATAAAGCAGGCTCGGAAGTTGGACATCAAACAGATCGTGCAGAGCACTA
TTGGGATGAGATAAGTGTAAAAGAATTAGAAACACACAAGCCAAATTCCCCTCTGTTTGGGCAA
AGTATGGCCTGAGATGTATGGCGAGCAAGCTCGAGGTTAATTAAAGATGAAGTATTTGGGGAAG
CAGGCCAGGCACCTGACTGTGTGCCCAGATCTGTGCCAGGCACAGGGCCAAAAAGATGAATTAA
CGCAGCATGTAATTACTGCACACATGCAGTGCCAGCTCGCTGCACATGGAACGAGTGTAACCAC
CCCTGTTGGCTGAGAAAAACTCACTCACAAGATGGGACAAGCAGATGTGTCCTAGGTTACATTG
TCTTGGTCCCTGGCTTCAGGCCGATTCAGTCCTCATCTTTCCAGATCCTCCTTTAGGCAGACTG
AGGATTCCAATGTCTCCCTCACCCAAACATTCAAGGGTTTAAAGAAAGACAGATAAGCCAATGA
ATTAGGTAGACGTGTGCCGAGCAGAGAACCAGAGCCAATGTGGGTCAGACTTGCGGAGCCAAAG
TTCACTGATCCCAAGGACAGCAAGCTAGCCAGAGTCTGACAGGAATTCAGCTTGCCGACTTTTG
TCACAGGAAACCCGAGGCACCTACCAGGAATCCTCAGGGGGACATTAGGATCCTGTCATCCTGC
GTCAGAGCACCTCCATTCCATAAGCAGCCTCTCAGGCCTGTGGAATGTTCTACCTGCCTCAGCT
CATAAAATGCCCCCGTTCCTTTGAGAGCATGTGTATTTCTTAACACTTCCATATTTGACCTTGA
GGCAGGCAGAAAAGACAGGAAGCCTGAGCCCCAGCATATTAAGTGGCATGCCTAAATGCAGGCA
GCATGTGCCCCAGGTGGCCCAAGGTGCCCTCTCAGGAAAGCTGAGAGTAGGGCCAAACAGCTCT
CCCGGGCCAGTCACAATGGCCTTGTCTCCTGCAACTGGTCTAATGTACCAGCAGCCAGTGAAAA
TAGGGCAAACCTCATTACCCACTGCACAGGCATAAGAATCAGGCTTCCCAGGAGTCACAAAGGG
CAGCTGAGGACCCCTCCAATGCTGAAGGCCAAAGATCTAGAGTCCCTCTCCTGTCCTTTTTCTG
AAAAACCTGGACTGCATTTCCTTCATGATGAATGGCTTCCCAACTTCACTGGGACTAAGGAAAG
CTGAGGAATTCAGGCCACTCATCCCACCAGTCCAGCCTCCAGCCCAGCTCCATTGTCACAACAG
GTCTCAAAGTGGAGCAAAAAGCCCTTCCCCTAAGAGGAAGCACCATGAAGGACAAGAGATGTTT
TACCCATCTCTTGGGTAAAACAAGAGAAGTTGTGGCTTTCATGGTATCCTGCGCGGCACAGGAC
AGAATTGAGGTTGGTGATAGTTTTCCAGTGATGATGACAAGAACCTGAGTCCTCCACTGGCTGT
TCTAGAGCCTCGTCGTGTGGCCCTATAGGCTTGCCACCCATGTCTCATCCTTCCCACCTTGTGC
CTGACCAAAAGGAATCATAGTTGTCATTTCCAGACAGGACAGGATGTTTCATACATGCTGCTTC
CTAGACAAAAGCTCTCTTTGTCTCCCTAACATCTTATCCTGTAAGGATCAACTCAGCACTTCCC
CAGGAAGCCCCTGTGCTGCCTTTGTACTTTCTCAGCTGCTCATAATACTCACTGCCCACTTGAT
GACTGCCTATTTGTGAATCTGCTGCCCTGTAGGACTGCAGGTAACTTCATGGCAGAGGTCATGT
GGATTTGTCTTTGTATCCTCACCTCACATAAAGATGGTGCTCAAAAGATGTGTAGAGAAGGAAA
GAGAAAAGGAAGAAAGGCATGATGGTAGGAAAGGAGAGAGATAGATTTAGTTCTGCAGTGGAAT
AGCTTCCACCAAGCCCAAGCGGGTGGAAGATGGTGCCTAAACATGGGGCACTTTCTGTTGGTGA
AGAGGTACTAGCAGGGCCAGGAGCCTACTGGCTGGACATGTGGTAGCAAATTGAAGTCTTGGCA
AGGGACCGGTGTAGATGACATTGAGGGTGCCTCCTGGCTCTGTAATACTCAGGTTCTTTGAACA
TTGTTATTTTTTCAAAAATTCATCTAGGCAGCCAAAAACATCACCCCAGCTGGCTGTCTAAAGC
AGTAGGGGTCAGGAATCAGTCCAGCTCCCCCTGCACCCCACCCTTATTCTTCCACAACCCAGCC
AGACCTGCTGTGAGCTGGCAGAGCTGCCTGCTGGCCTGGGCAGGGGGACCACTGGGAGGTGGGA
GAGTGCTTTCCTGGAGCCAAGATGCCGCCACAGCCCGAAGCTCCTCCTCTCTCTGTCCCCTGAC
TTTGGGGAGAGAAGAGAAAGCTCACAAAAACCTGATTAGGCCCTACCTGGTCCTTTCCATGGAG
TGTCCCCTGTCCACACCCTTTCTTCAAAGGTGAACTGCACTGTTGCTCTCTAGAGATACTCTGG
ATACTTCATATTGATAGGTGACCTTGGGCAAGTCCCTGCCCCCTGAGAGCCCCCATTTCCTCAT
CTGTCACATGGAGACCTTGTCTTCTGGGGCTAGGAAGGAGGGTGCCGGGCATAGTGGAGAGGAT
CTGTGAAGGTGAAGTTCCAGCCCTCCCCTGGCTCAGGGTTAGACTTCCCCTCAGAACCACAGGC
TGCCCTGAGGTGGGAGTCTCTGGCAGGGAGGAAGGATGACATGGCTCGCAAGCCCCTCCTTTCC
AAGTCCCGCTGTGGGGAAAGTAAGCTTTGAGTGGACCCAAGTCTCAGATGTCTCCCACAAGCTG
CCCAGACAAAGGGCTCTCAGAACTTTTGGGTCTCTGGTGGCTAGGATGGGTAGGTCAGCTCTTG
GCCAAAGGAGGTGCAGCCCCTTCCTGAGGCTCGAGGTTGCTGACGGCCCCTGGCATGCTGCGCT
GCTCCACACAAGCTTCTGCTCTCAATGTATCTGGAAGGTACTCATGGTGTTGTTCTTTAATCAC
CCCTCACCGCTGTGAATTGTCATGAAGAGTTCTTTAAGAGTATAATAGAAGACAAAGAAAGATG
CTATTAATGTTATTTTGCCAAAAATATTTTTGTAGCATAATATATTAATAAAAGCCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005398694	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCLAP00000008427
	ENSCLAP00000008427.1

RefSeq Acc Id:

XP_005398694 ⟸ XM_005398637

- UniProtKB:

A0A8C2V6U5 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MHAALAGPLLAALLATARARPQPPDGGQCRPPGSQRDLNSFLWTIRRHPPAYLFGTIHVPYTRV
WDFIPENSKAAFQASARVYFELDLTDPYTVSALASCQLLPPGENLQDVLPQELYWRLKRHLDYV
KLMMPSWMTPAQRGKGLYADYLFNAIAGNWERKRPVWVMLMVNSLTETDVRSRGVPVLDLYLAQ
QAEKMKKSTGAVERVEEQCHPLNGLNFSQVLFALNQTLLQHESVRAGSLQAPYTTEDLIKHYNC
GDLNAVIFNHDTSQLPNFINTTLPPHEQVTAQEIDSYFRQELIYKRNERMGKRVMALLRENEDK
ICFFAFGAGHFLGNNTVIDVLRQAGLEVDHTPAGKAIDSPAARSSAPPPEEISASPAPATPAAA
IPEAPSATPTATPEEEDSALSPHLLLPDSLSQLEEFGRQKKWHKRQNKHQRPRQFNDLWVRIED
STTASPPPLALQPTPSSGTAKPPFQLSDQLHQQDPTGPTSSSAPALGLLAAVAATIAAPFLLHT
LGPS

hide sequence

Ensembl Acc Id:

ENSCLAP00000008427 ⟸ ENSCLAT00000008554

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCLAG00000005900	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCLAT00000008554	ENTREZGENE
	ENSCLAT00000008554.1	UniProtKB/TrEMBL
InterPro	TIKI1/2-like	UniProtKB/TrEMBL
	TraB/PrgY/GumN_fam	UniProtKB/TrEMBL
NCBI Gene	Trabd2b	ENTREZGENE
PANTHER	METALLOPROTEASE TIKI2	UniProtKB/TrEMBL
	PTHR31120	UniProtKB/TrEMBL
Pfam	TraB_PrgY_gumN	UniProtKB/TrEMBL
UniProt	A0A8C2V6U5	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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