Hhatl (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955420 | 28,110,860 - 28,117,454 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955420 | 28,110,462 - 28,117,454 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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HHATL (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 42,692,663 - 42,702,798 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 42,692,663 - 42,702,824 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 42,734,155 - 42,744,290 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 42,709,159 - 42,718,017 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 42,709,158 - 42,718,017 | NCBI | | | | | Celera | 3 | 42,674,550 - 42,684,714 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p22.1 | NCBI | | | | | HuRef | 3 | 42,779,797 - 42,789,959 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 42,685,330 - 42,695,489 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 42,710,674 - 42,720,816 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Hhatl (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 9 | 121,613,082 - 121,626,604 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 9 | 121,613,082 - 121,621,573 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 9 | 121,784,016 - 121,792,507 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 9 | 121,784,016 - 121,792,507 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 9 | 121,693,134 - 121,701,625 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 9 | 121,632,720 - 121,641,082 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 9 | 122,257,393 - 122,265,884 (-) | NCBI | | Celera | | | Cytogenetic Map | 9 | F4 | NCBI | | | | | cM Map | 9 | 72.62 | NCBI | | | | |
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Hhatl (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 8 | 130,324,510 - 130,331,580 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 8 | 121,447,001 - 121,454,070 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 8 | 121,447,002 - 121,454,001 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 8 | 127,046,167 - 127,053,166 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 8 | 125,245,234 - 125,252,233 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 8 | 123,074,437 - 123,081,437 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 8 | 130,422,071 - 130,429,205 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 8 | 130,422,066 - 130,429,132 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 8 | 129,601,906 - 129,608,992 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 8 | 127,146,272 - 127,153,271 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 8 | 127,166,101 - 127,173,006 (+) | NCBI | | | | | Celera | 8 | 120,581,182 - 120,588,181 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q32 | NCBI | | | | |
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HHATL (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 42,657,282 - 42,667,522 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 42,662,044 - 42,672,248 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 42,600,209 - 42,610,540 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 43,664,271 - 43,674,486 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 43,664,271 - 43,674,486 (-) | Ensembl | panpan1.1 | | panPan2 | |
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HHATL (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 23 | 11,820,645 - 11,839,250 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 23 | 11,820,749 - 11,873,713 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 23 | 11,795,132 - 11,813,619 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 23 | 12,110,306 - 12,128,803 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 23 | 12,107,392 - 12,163,232 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 23 | 11,912,226 - 11,920,944 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 23 | 12,054,386 - 12,072,880 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 23 | 12,058,522 - 12,077,009 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Hhatl (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405118 | 200,055,934 - 200,065,391 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936695 | 2,408,167 - 2,418,594 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936695 | 2,408,829 - 2,417,726 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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HHATL (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 26,206,867 - 26,222,499 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 26,209,397 - 26,219,944 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 28,877,128 - 28,887,087 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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HHATL (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 4,149,375 - 4,169,760 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 4,148,531 - 4,157,265 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 163,039,382 - 163,051,643 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Hhatl (Heterocephalus glaber - naked mole-rat) |
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